| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158335154
Identifier: 158335154
GI number: 158335154
Start: 1989044
End: 1989619
Strand: Direct
Name: 158335154
Synonym: AM1_1997
Alternate gene names: NA
Gene position: 1989044-1989619 (Clockwise)
Preceding gene: 158335153
Following gene: 158335157
Centisome position: 30.58
GC content: 51.39
Gene sequence:
>576_bases ATGGTGCGTCTTCTCCATTGCGGTAGTTTAGCCTTCTTAGCAGTTGGATTATTGGGCGGCCCCAGCCAGGCCCATACGGT CAAAGCATCCGACTCAGTTGCCGTCACCTTTCATTTAGAACCTGATCACAATCCAAGGGCAGGAGACCCTGCTCAAGTCT GGTTCGTCCTTACCCAAAAGGGGGGCAGTACCATCCCTCTCTCCCAATGCGACTGCCATCTGCAGGTGATTGCAGAGGAA AATGGACAGACAATTGCCCAACCGCCTTTAACCGCCGTCTCCGCAGAGCAATACCAAAATATTCCTGGCGCTGATGTGAC GTTCCCAAAACCGGGGGCATACCAATTGAGCATTCAAGGCCAGCCACAAACAGGCGATGCATTCCAGCCATTTCAGTTTA GTTTTCCCGTCACTGTCGCTAAAGGCAGTAGCCCAAAGCCCTCTCCACCTGTCCAGTCAACAGATACGCCCTTGTCTTCG TCAAAATCAGGTCTACCCAAGGTTGTATGGATCAGCATCAGTATTGGCGTAGGACTCAGTTTCGTGATGCTAGTTCTTCG ACTGCGCAAAAAATAG
Upstream 100 bases:
>100_bases GTGCATTTGGGGAGAACTGTTGCGATCACAACGGCAATCCTCCTGGTTTTACTGATCCGCTGCCGTTGGGTATGGGCCTT GTTCTCACTGGAGAAATTTT
Downstream 100 bases:
>100_bases TGAATAGCCCATTGAGAGCATCCCGCTTCCAGAGTCCTCCAACAGAAGGGGGACAACACTTACCCTTCTTCCAAGTAAAA CCGGTCGTTGCTCTGGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MVRLLHCGSLAFLAVGLLGGPSQAHTVKASDSVAVTFHLEPDHNPRAGDPAQVWFVLTQKGGSTIPLSQCDCHLQVIAEE NGQTIAQPPLTAVSAEQYQNIPGADVTFPKPGAYQLSIQGQPQTGDAFQPFQFSFPVTVAKGSSPKPSPPVQSTDTPLSS SKSGLPKVVWISISIGVGLSFVMLVLRLRKK
Sequences:
>Translated_191_residues MVRLLHCGSLAFLAVGLLGGPSQAHTVKASDSVAVTFHLEPDHNPRAGDPAQVWFVLTQKGGSTIPLSQCDCHLQVIAEE NGQTIAQPPLTAVSAEQYQNIPGADVTFPKPGAYQLSIQGQPQTGDAFQPFQFSFPVTVAKGSSPKPSPPVQSTDTPLSS SKSGLPKVVWISISIGVGLSFVMLVLRLRKK >Mature_191_residues MVRLLHCGSLAFLAVGLLGGPSQAHTVKASDSVAVTFHLEPDHNPRAGDPAQVWFVLTQKGGSTIPLSQCDCHLQVIAEE NGQTIAQPPLTAVSAEQYQNIPGADVTFPKPGAYQLSIQGQPQTGDAFQPFQFSFPVTVAKGSSPKPSPPVQSTDTPLSS SKSGLPKVVWISISIGVGLSFVMLVLRLRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20196; Mature: 20196
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLLHCGSLAFLAVGLLGGPSQAHTVKASDSVAVTFHLEPDHNPRAGDPAQVWFVLTQK CEEEEECCCHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECC GGSTIPLSQCDCHLQVIAEENGQTIAQPPLTAVSAEQYQNIPGADVTFPKPGAYQLSIQG CCCCCCCCCCCEEEEEEEECCCCEECCCCCCEECHHHHCCCCCCCCCCCCCCCEEEEEEC QPQTGDAFQPFQFSFPVTVAKGSSPKPSPPVQSTDTPLSSSKSGLPKVVWISISIGVGLS CCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHH FVMLVLRLRKK HHHHHHHHHCC >Mature Secondary Structure MVRLLHCGSLAFLAVGLLGGPSQAHTVKASDSVAVTFHLEPDHNPRAGDPAQVWFVLTQK CEEEEECCCHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECC GGSTIPLSQCDCHLQVIAEENGQTIAQPPLTAVSAEQYQNIPGADVTFPKPGAYQLSIQG CCCCCCCCCCCEEEEEEEECCCCEECCCCCCEECHHHHCCCCCCCCCCCCCCCEEEEEEC QPQTGDAFQPFQFSFPVTVAKGSSPKPSPPVQSTDTPLSSSKSGLPKVVWISISIGVGLS CCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHH FVMLVLRLRKK HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA