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The map label for this gene is tuaB [H]

Identifier: 158335069

GI number: 158335069

Start: 1903707

End: 1905215

Strand: Reverse

Name: tuaB [H]

Synonym: AM1_1909

Alternate gene names: 158335069

Gene position: 1905215-1903707 (Counterclockwise)

Preceding gene: 158335070

Following gene: 158335068

Centisome position: 29.29

GC content: 49.44

Gene sequence:

>1509_bases
TTGCGTATTCGAAAGTCTAACCATACTGCAGATGCTTTCTTCAGTACGAAGCATTTGCAAGGTAATTTAAAGCAACGCGC
TGTCCGAGGTGGTGCAACCACGATCACGGCTCAAGGGTTGAAGTTTACGCTGACCCTTGTGGCCAATGTTGTGTTGGGGC
GTTTCTTAACCCCGAATGACTATGGTTTAGTGGGGATGGTGACCGCAGTCATGGGCTTTGTGACGATCTTCAAAGATCTG
GGTCTATCCATGGCGACGGTTCAGAAAGAAGACATTAATCATGAGCAGGTCAGTACGCTGTTCTGGATTAATGTGAGCTT
TAGTTTAGGAGTTGCGATCCTCGCCGCTTGCCTCTCACCTTTGATCGCTGGCTTTTATAATGAGCCGAGACTGACCCTGA
TTACCATTGCTTTAGCGGGTGGCATTGTGATGGGGGGCTTAGGGGTACAGCATACGGCGCTACTCCAGCGGCAGATGTCA
TACAACGCCTTAGCTTTCAACGATATTTTTGCCCAGCTCTCTGGGGTGAGTGCGGCCTTTCTATGTGTGGGGTTAGGTTG
GGGCTACTGGTCACTGATTGCCCTTTCCCTGGTGACGATTAGCGTGAATACGCTGGGCATTTGGATTGCCTGTCGATGGG
TACCGGGTTTACCCACCTGGAATACGGAGATGCGATCGCTAATGGTCTTCGGCAGTAACATCACTGGCTTCAGTATTGTG
AACTACTTGTCCCTCAATTTGGACAACGTCTTAATTGGTAAGTTTTGGGGCTCCCAGCAATTAGGACTCTACGCTAAAGC
CTATCAACTTTTGCTGTTGCCGATTAGCCAAATTAACGCCCCGATCACCAATGTGGCTGTTCCTGTACTCAGCCGCTTAG
TCGACAACCCGCATCGATATCGACAAGTCTATTTGCGCATCTTAGAAAAACTCATGCTATTGACCTTGCCGATTATCCTA
TTTATGATTTCGGCATCAGATTGGCTGATTCAGGTGCTATTGGGCTCTCAGTGGCTCGGTGCCAGCGCCATCTTCGCATT
ACTGGGAATTTCAGGGCTGATGCGGCCCATCGCCAATTCTGTAGGCTGGTTATTTATTACCCAAGATCGAACGGATGATT
TATTCCGATGGGGCATTTTGAGTTCGACGATTACCGTTTTCTCGTTTGGGGTCGGCCTACCCTGGCAGGCCCTGGGGGTG
GCTATCTCTTATTCCAGTATCGCCCTAGGAATCACGATGCCCTTATTATTTTTTGTGGTGGGGCGACAGGGGCCCGTCAA
AACGAAAGACTTCTATGTAACTATTGCCCCCCTTGGCTTTGCGACAATTTGGACCCTCTTGGCCCTCGGAACCCTACGAT
ACTTTGTTCAACCTCAGCCTTTTTGGGGGTGCTGTGTTGCGTTTGTCGTGACGGTCTTCAGCTTTTTTACGGCTTTAGTC
GCACTTCCCAAGGGCAGGCGCATCTTAGGGGATCTGCAACAATTAATGTCTGATTTAAAGGCGGCATAA

Upstream 100 bases:

>100_bases
GTGATTGGCCTCGTGGCAAATGGCGTTACGCCCACTCATAAAAATTATGCTTACCTAAAAGCTTAAGTGAGTCTGTCGAC
CGAATCATCAGGCCGAACCC

Downstream 100 bases:

>100_bases
AGGAGATGCAGAGACTGGATATGACCCCAACTTCAACTGACCATCCGCTCGACACGATCAATCAAGTTGAACCTCGTCTC
AACCCATCCTGGACCAGCGA

Product: polysaccharide export transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MRIRKSNHTADAFFSTKHLQGNLKQRAVRGGATTITAQGLKFTLTLVANVVLGRFLTPNDYGLVGMVTAVMGFVTIFKDL
GLSMATVQKEDINHEQVSTLFWINVSFSLGVAILAACLSPLIAGFYNEPRLTLITIALAGGIVMGGLGVQHTALLQRQMS
YNALAFNDIFAQLSGVSAAFLCVGLGWGYWSLIALSLVTISVNTLGIWIACRWVPGLPTWNTEMRSLMVFGSNITGFSIV
NYLSLNLDNVLIGKFWGSQQLGLYAKAYQLLLLPISQINAPITNVAVPVLSRLVDNPHRYRQVYLRILEKLMLLTLPIIL
FMISASDWLIQVLLGSQWLGASAIFALLGISGLMRPIANSVGWLFITQDRTDDLFRWGILSSTITVFSFGVGLPWQALGV
AISYSSIALGITMPLLFFVVGRQGPVKTKDFYVTIAPLGFATIWTLLALGTLRYFVQPQPFWGCCVAFVVTVFSFFTALV
ALPKGRRILGDLQQLMSDLKAA

Sequences:

>Translated_502_residues
MRIRKSNHTADAFFSTKHLQGNLKQRAVRGGATTITAQGLKFTLTLVANVVLGRFLTPNDYGLVGMVTAVMGFVTIFKDL
GLSMATVQKEDINHEQVSTLFWINVSFSLGVAILAACLSPLIAGFYNEPRLTLITIALAGGIVMGGLGVQHTALLQRQMS
YNALAFNDIFAQLSGVSAAFLCVGLGWGYWSLIALSLVTISVNTLGIWIACRWVPGLPTWNTEMRSLMVFGSNITGFSIV
NYLSLNLDNVLIGKFWGSQQLGLYAKAYQLLLLPISQINAPITNVAVPVLSRLVDNPHRYRQVYLRILEKLMLLTLPIIL
FMISASDWLIQVLLGSQWLGASAIFALLGISGLMRPIANSVGWLFITQDRTDDLFRWGILSSTITVFSFGVGLPWQALGV
AISYSSIALGITMPLLFFVVGRQGPVKTKDFYVTIAPLGFATIWTLLALGTLRYFVQPQPFWGCCVAFVVTVFSFFTALV
ALPKGRRILGDLQQLMSDLKAA
>Mature_502_residues
MRIRKSNHTADAFFSTKHLQGNLKQRAVRGGATTITAQGLKFTLTLVANVVLGRFLTPNDYGLVGMVTAVMGFVTIFKDL
GLSMATVQKEDINHEQVSTLFWINVSFSLGVAILAACLSPLIAGFYNEPRLTLITIALAGGIVMGGLGVQHTALLQRQMS
YNALAFNDIFAQLSGVSAAFLCVGLGWGYWSLIALSLVTISVNTLGIWIACRWVPGLPTWNTEMRSLMVFGSNITGFSIV
NYLSLNLDNVLIGKFWGSQQLGLYAKAYQLLLLPISQINAPITNVAVPVLSRLVDNPHRYRQVYLRILEKLMLLTLPIIL
FMISASDWLIQVLLGSQWLGASAIFALLGISGLMRPIANSVGWLFITQDRTDDLFRWGILSSTITVFSFGVGLPWQALGV
AISYSSIALGITMPLLFFVVGRQGPVKTKDFYVTIAPLGFATIWTLLALGTLRYFVQPQPFWGCCVAFVVTVFSFFTALV
ALPKGRRILGDLQQLMSDLKAA

Specific function: Might be involved in the translocation of teichuronic acid repeating units from the inner to the outer surface of the membrane [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788359, Length=367, Percent_Identity=25.3405994550409, Blast_Score=143, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 54921; Mature: 54921

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS00334 MYB_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRKSNHTADAFFSTKHLQGNLKQRAVRGGATTITAQGLKFTLTLVANVVLGRFLTPND
CCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCC
YGLVGMVTAVMGFVTIFKDLGLSMATVQKEDINHEQVSTLFWINVSFSLGVAILAACLSP
CCHHHHHHHHHHHHHHHHHHCCHHEEHHHHCCCHHHEEEEEEEEEHHHHHHHHHHHHHHH
LIAGFYNEPRLTLITIALAGGIVMGGLGVQHTALLQRQMSYNALAFNDIFAQLSGVSAAF
HHHHHCCCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHH
LCVGLGWGYWSLIALSLVTISVNTLGIWIACRWVPGLPTWNTEMRSLMVFGSNITGFSIV
HHHHCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHEEECCCCCHHHHH
NYLSLNLDNVLIGKFWGSQQLGLYAKAYQLLLLPISQINAPITNVAVPVLSRLVDNPHRY
HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHEEHHHCCCCHHHHHHHHHHHHHCCHHHH
RQVYLRILEKLMLLTLPIILFMISASDWLIQVLLGSQWLGASAIFALLGISGLMRPIANS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
VGWLFITQDRTDDLFRWGILSSTITVFSFGVGLPWQALGVAISYSSIALGITMPLLFFVV
CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEHHHHHHHHHHHHHHHHH
GRQGPVKTKDFYVTIAPLGFATIWTLLALGTLRYFVQPQPFWGCCVAFVVTVFSFFTALV
CCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ALPKGRRILGDLQQLMSDLKAA
HCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIRKSNHTADAFFSTKHLQGNLKQRAVRGGATTITAQGLKFTLTLVANVVLGRFLTPND
CCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCC
YGLVGMVTAVMGFVTIFKDLGLSMATVQKEDINHEQVSTLFWINVSFSLGVAILAACLSP
CCHHHHHHHHHHHHHHHHHHCCHHEEHHHHCCCHHHEEEEEEEEEHHHHHHHHHHHHHHH
LIAGFYNEPRLTLITIALAGGIVMGGLGVQHTALLQRQMSYNALAFNDIFAQLSGVSAAF
HHHHHCCCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHH
LCVGLGWGYWSLIALSLVTISVNTLGIWIACRWVPGLPTWNTEMRSLMVFGSNITGFSIV
HHHHCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHEEECCCCCHHHHH
NYLSLNLDNVLIGKFWGSQQLGLYAKAYQLLLLPISQINAPITNVAVPVLSRLVDNPHRY
HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHEEHHHCCCCHHHHHHHHHHHHHCCHHHH
RQVYLRILEKLMLLTLPIILFMISASDWLIQVLLGSQWLGASAIFALLGISGLMRPIANS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
VGWLFITQDRTDDLFRWGILSSTITVFSFGVGLPWQALGVAISYSSIALGITMPLLFFVV
CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEHHHHHHHHHHHHHHHHH
GRQGPVKTKDFYVTIAPLGFATIWTLLALGTLRYFVQPQPFWGCCVAFVVTVFSFFTALV
CCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ALPKGRRILGDLQQLMSDLKAA
HCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10048024; 9384377 [H]