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The map label for this gene is yjcF [C]

Identifier: 158335006

GI number: 158335006

Start: 1833818

End: 1834474

Strand: Reverse

Name: yjcF [C]

Synonym: AM1_1843

Alternate gene names: 158335006

Gene position: 1834474-1833818 (Counterclockwise)

Preceding gene: 158335007

Following gene: 158335004

Centisome position: 28.21

GC content: 47.95

Gene sequence:

>657_bases
ATGGCTAATGCAGAACATCTCGACTTGATCAAGCAAGGCATTGAAGTGTGGAACAATTGGCGAGGACAAAATCTTTTGGT
CCGCCCTGATTTGGAGGGGGCGAACTTAAGTGGATGTATCCTCGAAGCAGCCAATCTGGGACAGGCCAACTTGACCTATG
CCAATCTGGAAGGGGCCGATCTCAGGCAAGCCAACTTGCAGCGAGCCAGCTTACAAGGGGCTAACTTGCGAATGGCTGAT
CTGATCCATGCCAACCTTGAATCGGCTAATCTGGAATGCGCCAATTTGGAAGGGGCTGATTTGTATAAAACAAACCTGTC
TCAATCTAAATGCCATAAAGCCAATTTATCCAAAGCCATCATCCGACGAGCGAGCCTAGTCGGTGCCAATCTGAAAGCAA
CAGAGAACTCTCTCACCGATTATTTCCAGGCCAATATGATGCGGGTGAACTTCTATATGGCCAACGCCAATCAGGCCAAC
TTAGAAGGAGCCAATCTGATTGAAGCGAATTTAGGCTTGGCCAATTTTCTGGAGGCCAATCTGCGTAAAGCGAATCTGTG
CCGTGCCAATTTGTACCGCGCCAATTTATGTCGTGCGAATCCTTATGAAGCCTTGTTAAAAGGGACAACCATGCCAGATG
GCACCATTCATGACTAA

Upstream 100 bases:

>100_bases
AGTCTGGCCTGATTGAAACCAGTTATTCCCGGAAAAAAAAGCGTTAACTTACCTACGTCCGGCATTAATTTTGCCCTCCT
CACTGAGAACGTCCTAGCTC

Downstream 100 bases:

>100_bases
GCAGGCAACCGCAGTAATTGCTGCAAACGATTTAAAAACCCTTCTGCCAAAAGCGCCAACCCAGCAACTGGGATAGCCCC
TACCAACAAAATCGCTGGTT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MANAEHLDLIKQGIEVWNNWRGQNLLVRPDLEGANLSGCILEAANLGQANLTYANLEGADLRQANLQRASLQGANLRMAD
LIHANLESANLECANLEGADLYKTNLSQSKCHKANLSKAIIRRASLVGANLKATENSLTDYFQANMMRVNFYMANANQAN
LEGANLIEANLGLANFLEANLRKANLCRANLYRANLCRANPYEALLKGTTMPDGTIHD

Sequences:

>Translated_218_residues
MANAEHLDLIKQGIEVWNNWRGQNLLVRPDLEGANLSGCILEAANLGQANLTYANLEGADLRQANLQRASLQGANLRMAD
LIHANLESANLECANLEGADLYKTNLSQSKCHKANLSKAIIRRASLVGANLKATENSLTDYFQANMMRVNFYMANANQAN
LEGANLIEANLGLANFLEANLRKANLCRANLYRANLCRANPYEALLKGTTMPDGTIHD
>Mature_217_residues
ANAEHLDLIKQGIEVWNNWRGQNLLVRPDLEGANLSGCILEAANLGQANLTYANLEGADLRQANLQRASLQGANLRMADL
IHANLESANLECANLEGADLYKTNLSQSKCHKANLSKAIIRRASLVGANLKATENSLTDYFQANMMRVNFYMANANQANL
EGANLIEANLGLANFLEANLRKANLCRANLYRANLCRANPYEALLKGTTMPDGTIHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

Organism=Drosophila melanogaster, GI221377802, Length=161, Percent_Identity=34.1614906832298, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 23854; Mature: 23723

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANAEHLDLIKQGIEVWNNWRGQNLLVRPDLEGANLSGCILEAANLGQANLTYANLEGAD
CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCEEEECCCCCC
LRQANLQRASLQGANLRMADLIHANLESANLECANLEGADLYKTNLSQSKCHKANLSKAI
HHHHHHHHHHCCCCCEEHHHHHHHCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHH
IRRASLVGANLKATENSLTDYFQANMMRVNFYMANANQANLEGANLIEANLGLANFLEAN
HHHHHHHCCCCCCCHHHHHHHHHHCEEEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHH
LRKANLCRANLYRANLCRANPYEALLKGTTMPDGTIHD
CCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ANAEHLDLIKQGIEVWNNWRGQNLLVRPDLEGANLSGCILEAANLGQANLTYANLEGAD
CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCEEEECCCCCC
LRQANLQRASLQGANLRMADLIHANLESANLECANLEGADLYKTNLSQSKCHKANLSKAI
HHHHHHHHHHCCCCCEEHHHHHHHCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHH
IRRASLVGANLKATENSLTDYFQANMMRVNFYMANANQANLEGANLIEANLGLANFLEAN
HHHHHHHCCCCCCCHHHHHHHHHHCEEEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHH
LRKANLCRANLYRANLCRANPYEALLKGTTMPDGTIHD
CCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]