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The map label for this gene is yjcR [C]

Identifier: 158334984

GI number: 158334984

Start: 1807476

End: 1808660

Strand: Reverse

Name: yjcR [C]

Synonym: AM1_1821

Alternate gene names: 158334984

Gene position: 1808660-1807476 (Counterclockwise)

Preceding gene: 158334987

Following gene: 158334983

Centisome position: 27.81

GC content: 46.24

Gene sequence:

>1185_bases
GTGGGCGATAAACCCTTTCTAAAGTCATCTGGTAAATGGATGATCTCTGGAGCCGTTGTTTTAGCTCTGGGGTTCGGAGG
GGTTGGTGTTTTCCAAGCTTTTCAGCAGCAACCCAACCCCGCTAATAACGATTCAAAGTCCGCTTCTGAGAAATCCAGCG
CTATTTCTGCTCTTGGTCGCATTGAACCTGCAGGGCAGGTCCTTCAAGTTGGTGGTCCTACTGGGGAAAGAGTTCTTCAA
CTATTAGTGAAAGAAGGTCAACAGCTAGAGAAGGGTGAAACGATTGCCTTTTTAGAAAGCTACCCTGAGCGGCAAGCTGA
AGTTAAATTGGCTGCTAGCCGCTTACTCGAAGCCCAAAACCGATTTATTGCAGAGCGTGAATTAGGTAAAGCTCAAGGAC
AAGAAGCAAGAACGCGCCGGAATCAAGCGGAAACGCCTAAGATGAGAGAAATTGCGGCTCAAGATGCCTTAGTCAAGCAA
TCTAAGGTGGAGTATGAACAAGCCAAGATTACCCTGAAGAGGTATGAGTTTTTACAAAAGGCAGGGGCGGTCTCTAAGCA
AGAACTAGATGATCGTTTTCTCTCTTTTCGTAGTAAACAGCAGCAGCTCAATAATGCGATCGCAACGTTGGCGATGCTGC
AAGAAGAGCTACAAACCAATAGCAATAACGCCAGAGCTCAAATTAATCGAACTAAAGTAGGGACGTTGCGATCGCAAGCT
CAAATCGACTTAGCGTCTGCCAAAAGTAACCTTGAGCTGGCTAAGGCTCGCATGACCCGTACGATTATTCGTGCTCCCAA
TGCAGGGCAAATTTTAAAAGTCCATATTCGCCAAGGCGAGGCCATCCCCGCTGTCTCTACTTCTGGTAGTGAGGTTCAAA
AAGGGATTGTGGAAATGGGCAATACCCGGCAAATGTATGTTGTGGCTGAAGTGTATGAAACGGATATCAATCAGATCCAA
ATTGGCCAGCTTGCCAAGATTAATAGTCCCGTCATTAAAGGTGAGATCGAGGGAACTGTCGACAAAATTGGTTTAAAAAT
TGGAAAGAATGACGTAGTGGGGACAGATCCGGCAGCGAATACTGATTCTCGCGTGGTGGAAGTTAAGGTGCGTCTTCACA
ATAGTATTGCCGTTTCCGGATTGACCAACCTACAAGTGAATGTGGCGATTCAAACTGAAAGTTAG

Upstream 100 bases:

>100_bases
CGAATTTTGCCTGGGTAAAGATATTTAATTTAAGAGAATGAAAACAGATTATTGGGGAAAAATTCTTTACAATTGGGAGG
TGTTGAATTGAGCCATCAGT

Downstream 100 bases:

>100_bases
GCGGCGAAAATGTTGCTGGCTATCCCCCTCGCATGGTTACAGCTAGCCCGAGAAAAAGTACGGTTATTTGTAGCGTTGGC
AGGCATTGGGTTTGCCGTGA

Product: membrane fusion protein

Products: NA

Alternate protein names: DevB Family ABC Exporter Membrane Fusion Protein; Secretion Protein HlyD; DevB-Like Secretion Protein; Secretion Protein HlyD Family Protein; ABC Transporter; Auxiliary Transport Protein MFP Family; Transporter MFP Family; ABC-Transporter Membrane Fusion Protein; Membrane Fusion Protein Family Protein; Efflux Transporter RND Family MFP Subunit; Glycolipid ABC Transporter Membrane Protein; ABC-Transporter DevB Family Protein; Secretion Protein HlyD Family Protein DevB; Multidrug Resistance Efflux Pump-Like; Membrane Fusion Protein; ABC-Transporter DevB-Like Protein; DevB-Like ABC Transporter Membrane Fusion Protein; ABC-Transporter DevB-Like-Protein; ABC-Transporter Component; Membrane Fusion Protein DevB; RTX Secretion Protein D; Multidrug Resistance Efflux Pump; Permease Protein DevB-Like Protein

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MGDKPFLKSSGKWMISGAVVLALGFGGVGVFQAFQQQPNPANNDSKSASEKSSAISALGRIEPAGQVLQVGGPTGERVLQ
LLVKEGQQLEKGETIAFLESYPERQAEVKLAASRLLEAQNRFIAERELGKAQGQEARTRRNQAETPKMREIAAQDALVKQ
SKVEYEQAKITLKRYEFLQKAGAVSKQELDDRFLSFRSKQQQLNNAIATLAMLQEELQTNSNNARAQINRTKVGTLRSQA
QIDLASAKSNLELAKARMTRTIIRAPNAGQILKVHIRQGEAIPAVSTSGSEVQKGIVEMGNTRQMYVVAEVYETDINQIQ
IGQLAKINSPVIKGEIEGTVDKIGLKIGKNDVVGTDPAANTDSRVVEVKVRLHNSIAVSGLTNLQVNVAIQTES

Sequences:

>Translated_394_residues
MGDKPFLKSSGKWMISGAVVLALGFGGVGVFQAFQQQPNPANNDSKSASEKSSAISALGRIEPAGQVLQVGGPTGERVLQ
LLVKEGQQLEKGETIAFLESYPERQAEVKLAASRLLEAQNRFIAERELGKAQGQEARTRRNQAETPKMREIAAQDALVKQ
SKVEYEQAKITLKRYEFLQKAGAVSKQELDDRFLSFRSKQQQLNNAIATLAMLQEELQTNSNNARAQINRTKVGTLRSQA
QIDLASAKSNLELAKARMTRTIIRAPNAGQILKVHIRQGEAIPAVSTSGSEVQKGIVEMGNTRQMYVVAEVYETDINQIQ
IGQLAKINSPVIKGEIEGTVDKIGLKIGKNDVVGTDPAANTDSRVVEVKVRLHNSIAVSGLTNLQVNVAIQTES
>Mature_393_residues
GDKPFLKSSGKWMISGAVVLALGFGGVGVFQAFQQQPNPANNDSKSASEKSSAISALGRIEPAGQVLQVGGPTGERVLQL
LVKEGQQLEKGETIAFLESYPERQAEVKLAASRLLEAQNRFIAERELGKAQGQEARTRRNQAETPKMREIAAQDALVKQS
KVEYEQAKITLKRYEFLQKAGAVSKQELDDRFLSFRSKQQQLNNAIATLAMLQEELQTNSNNARAQINRTKVGTLRSQAQ
IDLASAKSNLELAKARMTRTIIRAPNAGQILKVHIRQGEAIPAVSTSGSEVQKGIVEMGNTRQMYVVAEVYETDINQIQI
GQLAKINSPVIKGEIEGTVDKIGLKIGKNDVVGTDPAANTDSRVVEVKVRLHNSIAVSGLTNLQVNVAIQTES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42854; Mature: 42723

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDKPFLKSSGKWMISGAVVLALGFGGVGVFQAFQQQPNPANNDSKSASEKSSAISALGR
CCCCCCCCCCCCEEEECEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC
IEPAGQVLQVGGPTGERVLQLLVKEGQQLEKGETIAFLESYPERQAEVKLAASRLLEAQN
CCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHH
RFIAERELGKAQGQEARTRRNQAETPKMREIAAQDALVKQSKVEYEQAKITLKRYEFLQK
HHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAVSKQELDDRFLSFRSKQQQLNNAIATLAMLQEELQTNSNNARAQINRTKVGTLRSQA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
QIDLASAKSNLELAKARMTRTIIRAPNAGQILKVHIRQGEAIPAVSTSGSEVQKGIVEMG
HEEHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCC
NTRQMYVVAEVYETDINQIQIGQLAKINSPVIKGEIEGTVDKIGLKIGKNDVVGTDPAAN
CCCEEEEEEEHHHCCCCEEECCCHHHCCCCEEECCCCCCHHHHHEEECCCCCCCCCCCCC
TDSRVVEVKVRLHNSIAVSGLTNLQVNVAIQTES
CCCEEEEEEEEECCCEEEECCCEEEEEEEEEECC
>Mature Secondary Structure 
GDKPFLKSSGKWMISGAVVLALGFGGVGVFQAFQQQPNPANNDSKSASEKSSAISALGR
CCCCCCCCCCCEEEECEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC
IEPAGQVLQVGGPTGERVLQLLVKEGQQLEKGETIAFLESYPERQAEVKLAASRLLEAQN
CCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHH
RFIAERELGKAQGQEARTRRNQAETPKMREIAAQDALVKQSKVEYEQAKITLKRYEFLQK
HHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAVSKQELDDRFLSFRSKQQQLNNAIATLAMLQEELQTNSNNARAQINRTKVGTLRSQA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
QIDLASAKSNLELAKARMTRTIIRAPNAGQILKVHIRQGEAIPAVSTSGSEVQKGIVEMG
HEEHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCC
NTRQMYVVAEVYETDINQIQIGQLAKINSPVIKGEIEGTVDKIGLKIGKNDVVGTDPAAN
CCCEEEEEEEHHHCCCCEEECCCHHHCCCCEEECCCCCCHHHHHEEECCCCCCCCCCCCC
TDSRVVEVKVRLHNSIAVSGLTNLQVNVAIQTES
CCCEEEEEEEEECCCEEEECCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA