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The map label for this gene is rbcS [H]

Identifier: 158334946

GI number: 158334946

Start: 1774474

End: 1774821

Strand: Reverse

Name: rbcS [H]

Synonym: AM1_1783

Alternate gene names: 158334946

Gene position: 1774821-1774474 (Counterclockwise)

Preceding gene: 158334947

Following gene: 158334945

Centisome position: 27.29

GC content: 45.11

Gene sequence:

>348_bases
ATGAGAACTTTACCCATAGAAAGACGTTTCGAGACCTTTTCCTACTTGCCTCCCCTGAATGACGAGCAGATTCGTCGTCA
AATTCAGTACATTTTGGATCAAGGCTATATTGCAGGGATCGAGTTTAACGATTCTCCTGAGCCGACCGCATACTACTGGA
CCATGTGGAAGTTGCCTCTATTCAAAAATCCTTCTGTTCAGGATGTTTTGTATGAGATTGATGAGTGCCGCTCTGAGTAC
TCTGACAAGTATGTGCGGGTGGTTGGATTTGACAATATCCGCCAGTGCCAAGTTATGAGCTTTATTGTTCATAAGCCGGG
TAGCAATAGTGGGTACCGCCCCTACTAA

Upstream 100 bases:

>100_bases
TCTAATGGTGATGAGCTTGAAGCAGATGCTGACGAAGAGCTGGATTGAACGCCCATAAACTTTTTTGCAGTTTTTTGATG
GAAATACTACGGATAAAACC

Downstream 100 bases:

>100_bases
ACTCTAGTGTGAATAGGGTATTAGCTTTCTGAGCTGAACGGAGAGGTAGGTTAACCTACCTCTCCTCCTTTTTGTCAGGA
GTGCTGACAGGCTGACACGA

Product: ribulose bisphosphate carboxylase, small subunit RbcS

Products: NA

Alternate protein names: RuBisCO small subunit [H]

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MRTLPIERRFETFSYLPPLNDEQIRRQIQYILDQGYIAGIEFNDSPEPTAYYWTMWKLPLFKNPSVQDVLYEIDECRSEY
SDKYVRVVGFDNIRQCQVMSFIVHKPGSNSGYRPY

Sequences:

>Translated_115_residues
MRTLPIERRFETFSYLPPLNDEQIRRQIQYILDQGYIAGIEFNDSPEPTAYYWTMWKLPLFKNPSVQDVLYEIDECRSEY
SDKYVRVVGFDNIRQCQVMSFIVHKPGSNSGYRPY
>Mature_115_residues
MRTLPIERRFETFSYLPPLNDEQIRRQIQYILDQGYIAGIEFNDSPEPTAYYWTMWKLPLFKNPSVQDVLYEIDECRSEY
SDKYVRVVGFDNIRQCQVMSFIVHKPGSNSGYRPY

Specific function: RuBisCO catalyzes two reactions:the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the

COG id: COG4451

COG function: function code C; Ribulose bisphosphate carboxylase small subunit

Gene ontology:
GO:0015977: Ribulose bisphosphate carboxylase, small subunit RbcS
GO:0016984: Ribulose bisphosphate carboxylase, small subunit RbcS

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO small chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000894 [H]

Pfam domain/function: PF00101 RuBisCO_small [H]

EC number: =4.1.1.39 [H]

Molecular weight: Translated: 13774; Mature: 13774

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLPIERRFETFSYLPPLNDEQIRRQIQYILDQGYIAGIEFNDSPEPTAYYWTMWKLPL
CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEEECCC
FKNPSVQDVLYEIDECRSEYSDKYVRVVGFDNIRQCQVMSFIVHKPGSNSGYRPY
CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHEECCCCCCCCCCC
>Mature Secondary Structure
MRTLPIERRFETFSYLPPLNDEQIRRQIQYILDQGYIAGIEFNDSPEPTAYYWTMWKLPL
CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEEECCC
FKNPSVQDVLYEIDECRSEYSDKYVRVVGFDNIRQCQVMSFIVHKPGSNSGYRPY
CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA