Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158334902

Identifier: 158334902

GI number: 158334902

Start: 1727909

End: 1728412

Strand: Reverse

Name: 158334902

Synonym: AM1_1739

Alternate gene names: NA

Gene position: 1728412-1727909 (Counterclockwise)

Preceding gene: 158334903

Following gene: 158334901

Centisome position: 26.58

GC content: 50.79

Gene sequence:

>504_bases
ATGACTGATTTAAAAAATGCTGGCGTCCCCGACGGGACGCCAAAATCTACTCAACCTGCTTCCTCACGCTCAGGCCTAGA
GCCTGAACTGGGGGGTGGGTTTCGTACTGAAAATGAGCGTACTGGTCTAGAACCTGAGCTGGGCGGTGTGATTCGCCAGA
AAGGGGTTTATGTTGATGAACCCACCTGTATTGGCTGTAAGCATTGTGCCCATGTCGCTCGAAACACGTTTTATATCGAG
CCAGGGTATGGGCGGTCACGGGTGTTTCGACAGGATGGCGATGCGTTTGAGATTGTCCAAGAAGCGATTGATACTTGCCC
TGTAGATTGTATTCATTGGGTCGATTATACGCAGCTGCAGCAGCTAGAAGCCGATCGGAAATATCAGCAGGTGAATATTC
TCGGCTCCCAAATTCCGGCTACCTATACTAAACGGGTGGTACCCAAAAAAGCAGGACGCAAACCTCGTCCAATTTCCTTG
GATGAGTCGGGGCCAGGTCTCTGA

Upstream 100 bases:

>100_bases
CTGTGATTAATACCACTGCTCAGCAAGGCTTCCAGGTCGCCGAGCAAGTCAATAATGAAGATGGCTCCATTCGTCTAGTG
GTTCAGCGCTGGAATGCGTG

Downstream 100 bases:

>100_bases
GTCCTTCCGTTCGTTTCTAATGGCTGCTCTCATTGTTTTCATCTTTAATTAGTCGTTACGAGCGATTTGGTATCCATCTG
GGCTTAGAGCGGATTCAGTA

Product: 4Fe-4S type ferredoxin

Products: NA

Alternate protein names: 3Fe-4S Ferredoxin; Ferredoxin-Like Protein; Ferredoxin 4Fe-4S Type; Ferrodoxin I

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MTDLKNAGVPDGTPKSTQPASSRSGLEPELGGGFRTENERTGLEPELGGVIRQKGVYVDEPTCIGCKHCAHVARNTFYIE
PGYGRSRVFRQDGDAFEIVQEAIDTCPVDCIHWVDYTQLQQLEADRKYQQVNILGSQIPATYTKRVVPKKAGRKPRPISL
DESGPGL

Sequences:

>Translated_167_residues
MTDLKNAGVPDGTPKSTQPASSRSGLEPELGGGFRTENERTGLEPELGGVIRQKGVYVDEPTCIGCKHCAHVARNTFYIE
PGYGRSRVFRQDGDAFEIVQEAIDTCPVDCIHWVDYTQLQQLEADRKYQQVNILGSQIPATYTKRVVPKKAGRKPRPISL
DESGPGL
>Mature_166_residues
TDLKNAGVPDGTPKSTQPASSRSGLEPELGGGFRTENERTGLEPELGGVIRQKGVYVDEPTCIGCKHCAHVARNTFYIEP
GYGRSRVFRQDGDAFEIVQEAIDTCPVDCIHWVDYTQLQQLEADRKYQQVNILGSQIPATYTKRVVPKKAGRKPRPISLD
ESGPGL

Specific function: Unknown

COG id: COG1141

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18374; Mature: 18243

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLKNAGVPDGTPKSTQPASSRSGLEPELGGGFRTENERTGLEPELGGVIRQKGVYVDE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEECC
PTCIGCKHCAHVARNTFYIEPGYGRSRVFRQDGDAFEIVQEAIDTCPVDCIHWVDYTQLQ
CCCCCHHHHHHHHHCEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHCCHHHHH
QLEADRKYQQVNILGSQIPATYTKRVVPKKAGRKPRPISLDESGPGL
HHHHHHHHHHHHHHHCCCCHHHHHHHCCHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDLKNAGVPDGTPKSTQPASSRSGLEPELGGGFRTENERTGLEPELGGVIRQKGVYVDE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEECC
PTCIGCKHCAHVARNTFYIEPGYGRSRVFRQDGDAFEIVQEAIDTCPVDCIHWVDYTQLQ
CCCCCHHHHHHHHHCEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHCCHHHHH
QLEADRKYQQVNILGSQIPATYTKRVVPKKAGRKPRPISLDESGPGL
HHHHHHHHHHHHHHHCCCCHHHHHHHCCHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA