| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158334892
Identifier: 158334892
GI number: 158334892
Start: 1715564
End: 1716556
Strand: Direct
Name: 158334892
Synonym: AM1_1729
Alternate gene names: NA
Gene position: 1715564-1716556 (Clockwise)
Preceding gene: 158334887
Following gene: 158334893
Centisome position: 26.38
GC content: 50.15
Gene sequence:
>993_bases ATGCCCAGTCAAGTTGAATATAAAACAACACGCCGGTTTATGAATATTTGGGTCTACTTGGCCCTCGGCGCCGTTGGCAT GATCATTTTGGCAGGATTGAGTTCCATTTTTTTCGTCAAACCGTTAGCCTCCAAAACCCTGCAGGCTCGGGAAGGTCAAC CTGCACGATTACAGCCGTTTAAAGTTAAACCTCAAGCCATTGGAGCGGTCAGAGTAGATGTCACGGCCCGAATCCCCACC AATCGCTACCTCGCCTATGAGGTGCAAATTCGAGACCAACAAGACAAAATCTTGGCAGCCGGCCTCAAAAATGCCTGGAA TGAGTCAGGGATTTGGCGAGAAGAAGGGCAAACAGGCACCTGGCAAGAAGATGATTTAGACGCAGGTTTAGATGTCAGTA GTGCCAAAGCGGAACCCCTAACTGTTGTGGTCGAGGTGCTGGAGTATGGCACCTCTCGTAACCAGACCCTCACCGAGTCC GTTTCCTTCCGCATTAAAGTCAATCAAGGCATTATCGACACCCGCTATTTATGGCCTGGTTTTTGGGGTGGCTTACTGAT GGCAGGTTTAACCTGTCTATTTTCCAAGTCGGCTGGAGCCACCTTAAGCGATAAAAGCATTGGGGATAGTGACTTAGGGG ACCGAGTCAATGCCGGGGGGCCAAACAAACTCATCAAAGTCATCGTCAAAACTGTGGCCGACGAAACCTCTCCTCCTTCT CTCAACTGCCGACTAATGGTCAGGGACGGCAATGGTGACGAGCTGTTTAATGCCTCGGAAGTGATGCCCCTCAAATTCAA GCGAGATGAAGACGGCGATATCGACAGTACCCACGGTCAAGCCACCTTTTTTATGGTGCTGGAAAAACCCAGTTCCTACG GGTTTTATGTTGAAGTCACCCCCGATGCTCCTGTCGATTCAACTCGGCTGATTATCAAGCAAGGTGCTGTGACTTTAGGG GCCGTCAAAGTCGCTCATATTGGCGCAGCCTAA
Upstream 100 bases:
>100_bases CTTCGTCAAATTGTTAGTCTTCTAGCCAAGCTATACTGGCCTGCAAGTCCACCGTCCTGAAGCAAACCGAGCCTCTTACT GTTACCCGTCATCCATACCC
Downstream 100 bases:
>100_bases ATCCAGCTCCCTTCCCAAAGATGCAACTCGATTTTTTCTCATTTAGGATGGCAGTAGAAACCTTTTAAACTATGCTGACA AAACTTTTTTCAGTCGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MPSQVEYKTTRRFMNIWVYLALGAVGMIILAGLSSIFFVKPLASKTLQAREGQPARLQPFKVKPQAIGAVRVDVTARIPT NRYLAYEVQIRDQQDKILAAGLKNAWNESGIWREEGQTGTWQEDDLDAGLDVSSAKAEPLTVVVEVLEYGTSRNQTLTES VSFRIKVNQGIIDTRYLWPGFWGGLLMAGLTCLFSKSAGATLSDKSIGDSDLGDRVNAGGPNKLIKVIVKTVADETSPPS LNCRLMVRDGNGDELFNASEVMPLKFKRDEDGDIDSTHGQATFFMVLEKPSSYGFYVEVTPDAPVDSTRLIIKQGAVTLG AVKVAHIGAA
Sequences:
>Translated_330_residues MPSQVEYKTTRRFMNIWVYLALGAVGMIILAGLSSIFFVKPLASKTLQAREGQPARLQPFKVKPQAIGAVRVDVTARIPT NRYLAYEVQIRDQQDKILAAGLKNAWNESGIWREEGQTGTWQEDDLDAGLDVSSAKAEPLTVVVEVLEYGTSRNQTLTES VSFRIKVNQGIIDTRYLWPGFWGGLLMAGLTCLFSKSAGATLSDKSIGDSDLGDRVNAGGPNKLIKVIVKTVADETSPPS LNCRLMVRDGNGDELFNASEVMPLKFKRDEDGDIDSTHGQATFFMVLEKPSSYGFYVEVTPDAPVDSTRLIIKQGAVTLG AVKVAHIGAA >Mature_329_residues PSQVEYKTTRRFMNIWVYLALGAVGMIILAGLSSIFFVKPLASKTLQAREGQPARLQPFKVKPQAIGAVRVDVTARIPTN RYLAYEVQIRDQQDKILAAGLKNAWNESGIWREEGQTGTWQEDDLDAGLDVSSAKAEPLTVVVEVLEYGTSRNQTLTESV SFRIKVNQGIIDTRYLWPGFWGGLLMAGLTCLFSKSAGATLSDKSIGDSDLGDRVNAGGPNKLIKVIVKTVADETSPPSL NCRLMVRDGNGDELFNASEVMPLKFKRDEDGDIDSTHGQATFFMVLEKPSSYGFYVEVTPDAPVDSTRLIIKQGAVTLGA VKVAHIGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35989; Mature: 35857
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSQVEYKTTRRFMNIWVYLALGAVGMIILAGLSSIFFVKPLASKTLQAREGQPARLQPF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHCCCCCCCCCCE KVKPQAIGAVRVDVTARIPTNRYLAYEVQIRDQQDKILAAGLKNAWNESGIWREEGQTGT EECHHHCEEEEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCC WQEDDLDAGLDVSSAKAEPLTVVVEVLEYGTSRNQTLTESVSFRIKVNQGIIDTRYLWPG CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCEEEEEEECCCEEECEEECCH FWGGLLMAGLTCLFSKSAGATLSDKSIGDSDLGDRVNAGGPNKLIKVIVKTVADETSPPS HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC LNCRLMVRDGNGDELFNASEVMPLKFKRDEDGDIDSTHGQATFFMVLEKPSSYGFYVEVT CEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEC PDAPVDSTRLIIKQGAVTLGAVKVAHIGAA CCCCCCCCEEEEECCCEEEEEEEEEEECCC >Mature Secondary Structure PSQVEYKTTRRFMNIWVYLALGAVGMIILAGLSSIFFVKPLASKTLQAREGQPARLQPF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHCCCCCCCCCCE KVKPQAIGAVRVDVTARIPTNRYLAYEVQIRDQQDKILAAGLKNAWNESGIWREEGQTGT EECHHHCEEEEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCC WQEDDLDAGLDVSSAKAEPLTVVVEVLEYGTSRNQTLTESVSFRIKVNQGIIDTRYLWPG CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCEEEEEEECCCEEECEEECCH FWGGLLMAGLTCLFSKSAGATLSDKSIGDSDLGDRVNAGGPNKLIKVIVKTVADETSPPS HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC LNCRLMVRDGNGDELFNASEVMPLKFKRDEDGDIDSTHGQATFFMVLEKPSSYGFYVEVT CEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEC PDAPVDSTRLIIKQGAVTLGAVKVAHIGAA CCCCCCCCEEEEECCCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA