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The map label for this gene is 158334855

Identifier: 158334855

GI number: 158334855

Start: 1671270

End: 1672883

Strand: Reverse

Name: 158334855

Synonym: AM1_1692

Alternate gene names: NA

Gene position: 1672883-1671270 (Counterclockwise)

Preceding gene: 158334856

Following gene: 158334854

Centisome position: 25.72

GC content: 48.27

Gene sequence:

>1614_bases
ATGCGAGTTTTACTAATTTACCCCCTCTTTCCAAAAAGTTTTTGGTCATTTGAGAAAACCTTGTCCTTAGTTGACAAAAA
AGCATTATTGCCGCCTTTGGGGTTAGTGACGGTAGCCGCAATTTTGCCCCAGGAGTGGGAGTTTCGGCTAATTGACCGCA
ATGTTGAAGCCGTGCCTGAGTCAGATTGGGACTGGGCTGAGATGGTGATTCTATCCGGCATGATTGTTCAGAAAGAAGAC
ATGCTGAACCTTGTGGGAGAATCCCATCGCCGCGGGAAGAAAGTTGCGGTGGGTGGACCCTTTGCTACATCTGTTCCTGA
AGATTTGCAGGCGGTTGGTGCAGACTACTTGATCTTGGACGAAGGGGAAATCACCCTGCCCATGTTTATCGAAGCGATAG
AGCGGGGCGATGAAAGCGGTGTCTATCGTGCGACCGAGAAACCTGCGGTGACTGAGACCCCCATTCCTCGCTTTGACCTG
CTGAAATTTCCGGCTTACGACAATATGTCGGTGCAGTTTTCCCGGGGATGTCCCTTTCAATGTGAATTTTGCGACATTAT
CGTCCTCTATGGGCGTAAGCCTAGGACTAAAACCCCCCAGCAGCTCATTGCTGAGCTCGATCGGTTGTGTGAGCTAGGGT
GGCGTGGCTCTGTGTTTATGGTCGATGACAACTTTATTGGCAATAAGCGGAATGTGAAGCTATTGCTAGCTGAGTTGCGG
GAATGGATTGCGGAGAAAAATTACCCCTTTACCTTTGCTACAGAGGCTTCCGTCGATTTGGCTCAGGATGAGGAATTGAT
GGATCTGATGATCGAGTGCAACTTTAACAGCGTGTTTTTGGGGATTGAAACCCCGGATGAAGACAGCTTAAAGGTAACCA
AAAAGTTCCAGAATACCCGTGACTCCCTTAGCGAATCCATCGATACCATGTCTGAGAAAGGGCTGCGGATCATGGCTGGG
TTCATTATTGGGTTTGATGGAGAAAAGAAGGGAGCAGGCGATCGCATTACCCGTTTCGTCGAAAAGACGAACATTCCCAT
TGCCCTGTTTAGCATGTTGCAAGCCTTGCCCAATACAGCGCTTTGGCATCGCCTAGAAAAAGAAGGTCGTCTTATCCAAG
GTCAAGAAGGCACGGGTAATCAAACCTCATTGATGAACTATGTGCCGACTCGTCCCATCGATGAAATTGCCAATGAATAT
GTCGAGGCCTTCTGTAATATTTACGATCCGGTGAAATATCTGGATCGCACCTTCCGTCACTTTATGAGTATGAATATTCG
TCCCAAGTATGGGGGGTCGGGTAAGAGCTCCGTTAAGGTGAGCTGGGTTGATATTCGAGCCTTATCTACCTTGGCTTGGC
GCCAAGGCGTAGTGCGAAAGACGCGCTGGAAATTTTGGATTAACTTGTTCCGGATCATCCAAAAGAATCCGCAGGTTCTG
ACTCGGTATCTGTCTGCTTCTGCGTTTATTGAACACTTTATGGAATACCGGCAAATTGTCCGGGAGGAAATTGAGTCGCA
GTTAGCCGTACATTTGGCTAATCATCCTCGGGTGGTGGTCAAACCGGTAGAAGAGTCGTCTCAGCCAGAACAAATTCCAG
CTAAAACGGCTTAA

Upstream 100 bases:

>100_bases
ATTAAATTGAGTCAATGTCTAAGGTTAAATCTACTCTCAGCAAGAAAAGTGAATTAGCGGTAAGATTTGAGGTATTTGGA
TTAGGAGATGTGGCTTCTCT

Downstream 100 bases:

>100_bases
TGACAGCAGCTAAAGCATTTCTAGCGGTTGTGATTTCATCTACCCACCATGTCTAACGTATCTTTGTCTGAGCAAGCCTG
GTCCTTAGACCATGGTGCTT

Product: radical SAM domain/B12 binding domain-containing protein

Products: NA

Alternate protein names: ORF N [H]

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MRVLLIYPLFPKSFWSFEKTLSLVDKKALLPPLGLVTVAAILPQEWEFRLIDRNVEAVPESDWDWAEMVILSGMIVQKED
MLNLVGESHRRGKKVAVGGPFATSVPEDLQAVGADYLILDEGEITLPMFIEAIERGDESGVYRATEKPAVTETPIPRFDL
LKFPAYDNMSVQFSRGCPFQCEFCDIIVLYGRKPRTKTPQQLIAELDRLCELGWRGSVFMVDDNFIGNKRNVKLLLAELR
EWIAEKNYPFTFATEASVDLAQDEELMDLMIECNFNSVFLGIETPDEDSLKVTKKFQNTRDSLSESIDTMSEKGLRIMAG
FIIGFDGEKKGAGDRITRFVEKTNIPIALFSMLQALPNTALWHRLEKEGRLIQGQEGTGNQTSLMNYVPTRPIDEIANEY
VEAFCNIYDPVKYLDRTFRHFMSMNIRPKYGGSGKSSVKVSWVDIRALSTLAWRQGVVRKTRWKFWINLFRIIQKNPQVL
TRYLSASAFIEHFMEYRQIVREEIESQLAVHLANHPRVVVKPVEESSQPEQIPAKTA

Sequences:

>Translated_537_residues
MRVLLIYPLFPKSFWSFEKTLSLVDKKALLPPLGLVTVAAILPQEWEFRLIDRNVEAVPESDWDWAEMVILSGMIVQKED
MLNLVGESHRRGKKVAVGGPFATSVPEDLQAVGADYLILDEGEITLPMFIEAIERGDESGVYRATEKPAVTETPIPRFDL
LKFPAYDNMSVQFSRGCPFQCEFCDIIVLYGRKPRTKTPQQLIAELDRLCELGWRGSVFMVDDNFIGNKRNVKLLLAELR
EWIAEKNYPFTFATEASVDLAQDEELMDLMIECNFNSVFLGIETPDEDSLKVTKKFQNTRDSLSESIDTMSEKGLRIMAG
FIIGFDGEKKGAGDRITRFVEKTNIPIALFSMLQALPNTALWHRLEKEGRLIQGQEGTGNQTSLMNYVPTRPIDEIANEY
VEAFCNIYDPVKYLDRTFRHFMSMNIRPKYGGSGKSSVKVSWVDIRALSTLAWRQGVVRKTRWKFWINLFRIIQKNPQVL
TRYLSASAFIEHFMEYRQIVREEIESQLAVHLANHPRVVVKPVEESSQPEQIPAKTA
>Mature_537_residues
MRVLLIYPLFPKSFWSFEKTLSLVDKKALLPPLGLVTVAAILPQEWEFRLIDRNVEAVPESDWDWAEMVILSGMIVQKED
MLNLVGESHRRGKKVAVGGPFATSVPEDLQAVGADYLILDEGEITLPMFIEAIERGDESGVYRATEKPAVTETPIPRFDL
LKFPAYDNMSVQFSRGCPFQCEFCDIIVLYGRKPRTKTPQQLIAELDRLCELGWRGSVFMVDDNFIGNKRNVKLLLAELR
EWIAEKNYPFTFATEASVDLAQDEELMDLMIECNFNSVFLGIETPDEDSLKVTKKFQNTRDSLSESIDTMSEKGLRIMAG
FIIGFDGEKKGAGDRITRFVEKTNIPIALFSMLQALPNTALWHRLEKEGRLIQGQEGTGNQTSLMNYVPTRPIDEIANEY
VEAFCNIYDPVKYLDRTFRHFMSMNIRPKYGGSGKSSVKVSWVDIRALSTLAWRQGVVRKTRWKFWINLFRIIQKNPQVL
TRYLSASAFIEHFMEYRQIVREEIESQLAVHLANHPRVVVKPVEESSQPEQIPAKTA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 61384; Mature: 61384

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLIYPLFPKSFWSFEKTLSLVDKKALLPPLGLVTVAAILPQEWEFRLIDRNVEAVPE
CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCC
SDWDWAEMVILSGMIVQKEDMLNLVGESHRRGKKVAVGGPFATSVPEDLQAVGADYLILD
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCCEEEEE
EGEITLPMFIEAIERGDESGVYRATEKPAVTETPIPRFDLLKFPAYDNMSVQFSRGCPFQ
CCCEEHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHEECCCCCCCEEEECCCCCCE
CEFCDIIVLYGRKPRTKTPQQLIAELDRLCELGWRGSVFMVDDNFIGNKRNVKLLLAELR
ECCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHH
EWIAEKNYPFTFATEASVDLAQDEELMDLMIECNFNSVFLGIETPDEDSLKVTKKFQNTR
HHHHCCCCCEEEEECCCCCCCCCHHHHHHHEEECCCEEEEEECCCCCCCHHHHHHHHHHH
DSLSESIDTMSEKGLRIMAGFIIGFDGEKKGAGDRITRFVEKTNIPIALFSMLQALPNTA
HHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHH
LWHRLEKEGRLIQGQEGTGNQTSLMNYVPTRPIDEIANEYVEAFCNIYDPVKYLDRTFRH
HHHHHHHCCCEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMSMNIRPKYGGSGKSSVKVSWVDIRALSTLAWRQGVVRKTRWKFWINLFRIIQKNPQVL
HHCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TRYLSASAFIEHFMEYRQIVREEIESQLAVHLANHPRVVVKPVEESSQPEQIPAKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVLLIYPLFPKSFWSFEKTLSLVDKKALLPPLGLVTVAAILPQEWEFRLIDRNVEAVPE
CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCC
SDWDWAEMVILSGMIVQKEDMLNLVGESHRRGKKVAVGGPFATSVPEDLQAVGADYLILD
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCCEEEEE
EGEITLPMFIEAIERGDESGVYRATEKPAVTETPIPRFDLLKFPAYDNMSVQFSRGCPFQ
CCCEEHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHEECCCCCCCEEEECCCCCCE
CEFCDIIVLYGRKPRTKTPQQLIAELDRLCELGWRGSVFMVDDNFIGNKRNVKLLLAELR
ECCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHH
EWIAEKNYPFTFATEASVDLAQDEELMDLMIECNFNSVFLGIETPDEDSLKVTKKFQNTR
HHHHCCCCCEEEEECCCCCCCCCHHHHHHHEEECCCEEEEEECCCCCCCHHHHHHHHHHH
DSLSESIDTMSEKGLRIMAGFIIGFDGEKKGAGDRITRFVEKTNIPIALFSMLQALPNTA
HHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHH
LWHRLEKEGRLIQGQEGTGNQTSLMNYVPTRPIDEIANEYVEAFCNIYDPVKYLDRTFRH
HHHHHHHCCCEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMSMNIRPKYGGSGKSSVKVSWVDIRALSTLAWRQGVVRKTRWKFWINLFRIIQKNPQVL
HHCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TRYLSASAFIEHFMEYRQIVREEIESQLAVHLANHPRVVVKPVEESSQPEQIPAKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231; 8467083 [H]