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The map label for this gene is ylbC [H]

Identifier: 158334824

GI number: 158334824

Start: 1638488

End: 1639192

Strand: Reverse

Name: ylbC [H]

Synonym: AM1_1661

Alternate gene names: 158334824

Gene position: 1639192-1638488 (Counterclockwise)

Preceding gene: 158334825

Following gene: 158334823

Centisome position: 25.2

GC content: 51.49

Gene sequence:

>705_bases
ATGGCTAAGTCCAGCTTATCTCGGGTGTCGTTGACGGCGTTGGAACAGGATGAGGTTGGGAACAAGGGACAACGCACCCG
GCTAGGTGCTCAAAAGTCATTGTCTTGGTTATTGGTGGGGTGTATCGCTCTCCCCATTAAATTGCCGTTTCCGGTCCCTT
TTGAATGTAAAACGCCCCGACAAACGCCGACCATTCGTCGACAGCCCCGACGGCGAAAGTCAGTCCCTCGTCCTGCCCCA
GAACCTGTCTTAGAAGCGCCTGAGCCGATTCCTTCTCAGAAAACGAGGCGCGATTCAACAGCTGTTGCTCAAAGCAATTT
ATCCCAGCTGATTTATACAGAAGTGAATGATATTCGCCAGTCCTATGGTCTACAGCCCCTCCAGTGGAATGGAGATGTTG
CTAAAGTGGCTCGCAGACATAGCCAAAATATGGCAGCCAACAACTTCTTTAGCCATGCTGATCCCCAAGGCAATACGGCA
TTGGAACGCTTATTGAATGCCGGGGTTCGGTTCAATCTGGTGGCCGAAAATTTGGCTTTGAATGAAAATGCGCCAGATCC
AGTGGCCCAGGCGATTATGGGATGGTGGGATAGCCCTGGCCATCGACGGAATATGCTACGGGCGGAAGTCACAGAAACGG
GGGTAGGCGTTATCCGCCAGGGGGAGGAATATTTCTTTACACAGGTCTTTATTCGCCAACCTTAA

Upstream 100 bases:

>100_bases
TTGACGTCTGCCTAAGCGTAATACTCAGCAATATCTCAGGTGGGTTCACGGTTTATTGGGTAAAATAATTCCCAATTCAT
TACGTGCGCGACCCATTCCT

Downstream 100 bases:

>100_bases
ATGATTAAAAGAGTCTAGATATCAGGCTTTGAGAGGCTTCTATTAAGTAACATTGTTTGAAGTTTCCTCTCATTTTTGTC
GAAGTGGCAAATGCGCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MAKSSLSRVSLTALEQDEVGNKGQRTRLGAQKSLSWLLVGCIALPIKLPFPVPFECKTPRQTPTIRRQPRRRKSVPRPAP
EPVLEAPEPIPSQKTRRDSTAVAQSNLSQLIYTEVNDIRQSYGLQPLQWNGDVAKVARRHSQNMAANNFFSHADPQGNTA
LERLLNAGVRFNLVAENLALNENAPDPVAQAIMGWWDSPGHRRNMLRAEVTETGVGVIRQGEEYFFTQVFIRQP

Sequences:

>Translated_234_residues
MAKSSLSRVSLTALEQDEVGNKGQRTRLGAQKSLSWLLVGCIALPIKLPFPVPFECKTPRQTPTIRRQPRRRKSVPRPAP
EPVLEAPEPIPSQKTRRDSTAVAQSNLSQLIYTEVNDIRQSYGLQPLQWNGDVAKVARRHSQNMAANNFFSHADPQGNTA
LERLLNAGVRFNLVAENLALNENAPDPVAQAIMGWWDSPGHRRNMLRAEVTETGVGVIRQGEEYFFTQVFIRQP
>Mature_233_residues
AKSSLSRVSLTALEQDEVGNKGQRTRLGAQKSLSWLLVGCIALPIKLPFPVPFECKTPRQTPTIRRQPRRRKSVPRPAPE
PVLEAPEPIPSQKTRRDSTAVAQSNLSQLIYTEVNDIRQSYGLQPLQWNGDVAKVARRHSQNMAANNFFSHADPQGNTAL
ERLLNAGVRFNLVAENLALNENAPDPVAQAIMGWWDSPGHRRNMLRAEVTETGVGVIRQGEEYFFTQVFIRQP

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 26199; Mature: 26068

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSSLSRVSLTALEQDEVGNKGQRTRLGAQKSLSWLLVGCIALPIKLPFPVPFECKTPR
CCCCHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC
QTPTIRRQPRRRKSVPRPAPEPVLEAPEPIPSQKTRRDSTAVAQSNLSQLIYTEVNDIRQ
CCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYGLQPLQWNGDVAKVARRHSQNMAANNFFSHADPQGNTALERLLNAGVRFNLVAENLAL
HHCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEEHHHCC
NENAPDPVAQAIMGWWDSPGHRRNMLRAEVTETGVGVIRQGEEYFFTQVFIRQP
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHCCCHHEEEEEEEECC
>Mature Secondary Structure 
AKSSLSRVSLTALEQDEVGNKGQRTRLGAQKSLSWLLVGCIALPIKLPFPVPFECKTPR
CCCHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC
QTPTIRRQPRRRKSVPRPAPEPVLEAPEPIPSQKTRRDSTAVAQSNLSQLIYTEVNDIRQ
CCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYGLQPLQWNGDVAKVARRHSQNMAANNFFSHADPQGNTALERLLNAGVRFNLVAENLAL
HHCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEEHHHCC
NENAPDPVAQAIMGWWDSPGHRRNMLRAEVTETGVGVIRQGEEYFFTQVFIRQP
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHCCCHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]