Click here to switch to the map view.

The map label for this gene is ykvN [H]

Identifier: 158334775

GI number: 158334775

Start: 1582894

End: 1583166

Strand: Direct

Name: ykvN [H]

Synonym: AM1_1610

Alternate gene names: 158334775

Gene position: 1582894-1583166 (Clockwise)

Preceding gene: 158334772

Following gene: 158334777

Centisome position: 24.34

GC content: 47.25

Gene sequence:

>273_bases
ATGAGAGTTTTGGGTGGGAAATGGAAGGGGTCGATTCTCTGGCACCTAAAAAATGGTCCGGTGCGCTTTAACGACTTAGC
CCGGCAGTTGGGAGGAGCCAGTAAAAAAATGGTGGTGCAACGACTCCGAGAAATGGAGGAAGCAGGTTTGGTTAAGCGAA
AGGTGGTGAGTGATCGCCCAATTGCCGTTACTTACGAAATCACCGAGTTTGGTCAGACTGCGTTGAGTTTTCTGGAAGAA
CTTAAAAATTGGGCAGAAAAGCACCAGATTTAA

Upstream 100 bases:

>100_bases
CATCTCTCCCATGGGCACTTCTTTAGGAATCACTACCGATGCTCAAGGCCGTAAACATGTCTCAGAGCCCTGTCTAGAAC
CTTGCCCAATTGAACGAGGG

Downstream 100 bases:

>100_bases
CTACCCTCATCGGGCGATGTGTCGGTTGAGTTGTCGCGATTTTCGAGAGTCACGATTGCTTGGACGATTAGCTTCTGACT
CAAGGAACCCTGAAAGTCCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MRVLGGKWKGSILWHLKNGPVRFNDLARQLGGASKKMVVQRLREMEEAGLVKRKVVSDRPIAVTYEITEFGQTALSFLEE
LKNWAEKHQI

Sequences:

>Translated_90_residues
MRVLGGKWKGSILWHLKNGPVRFNDLARQLGGASKKMVVQRLREMEEAGLVKRKVVSDRPIAVTYEITEFGQTALSFLEE
LKNWAEKHQI
>Mature_90_residues
MRVLGGKWKGSILWHLKNGPVRFNDLARQLGGASKKMVVQRLREMEEAGLVKRKVVSDRPIAVTYEITEFGQTALSFLEE
LKNWAEKHQI

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 10320; Mature: 10320

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLGGKWKGSILWHLKNGPVRFNDLARQLGGASKKMVVQRLREMEEAGLVKRKVVSDRP
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
IAVTYEITEFGQTALSFLEELKNWAEKHQI
EEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVLGGKWKGSILWHLKNGPVRFNDLARQLGGASKKMVVQRLREMEEAGLVKRKVVSDRP
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
IAVTYEITEFGQTALSFLEELKNWAEKHQI
EEEEEEHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]