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The map label for this gene is 158334768

Identifier: 158334768

GI number: 158334768

Start: 1578092

End: 1579267

Strand: Reverse

Name: 158334768

Synonym: AM1_1602

Alternate gene names: NA

Gene position: 1579267-1578092 (Counterclockwise)

Preceding gene: 158334769

Following gene: 158334767

Centisome position: 24.28

GC content: 49.91

Gene sequence:

>1176_bases
ATGGTTTCTATCGCCCGCAAAAATTTATTCCAGGACTTGCCTCGCTTTATTGTTGCCCAAGCCGGCATCATGTTCTCCGT
TGGGTTAGTCACCATTCAAATTGGCATCCTCAACGGATTTACCCGTTCGTCCACCGTCCTAATCGAAAATGCGGATGCAG
ATATCTGGGTGACTTCCGAAGAACTACGCCATTTGGCCTTAACCCTACCTTTGGAATACAAACAGCTGGCTGAAGCGAAA
GAGGTAGAAGGAGTCGATCGGGCAGAACCCCTAATTGCCCAATCCACGGTGTGGCGGGATAAGTCCAATCAGATTGCCCC
CATTCGGATTATTGGCTTTGACCCTGAAGATACCTTGTTTCGACCACGTACGCTTCTGGAAGGAACCCTGAAGGATATCC
AGCAGCCCTATAAAATCTTTGTGGATCAAGCCGATCTCAAACTCCTGGATGTCTCGGCAGTAGGTGATCGGGCTGAAATT
GGCTCCTATGAAGGAGAGATTAAAGGGATTACGGCCGGCACTCGCTCGATTGTGGCGAGTCCTTATATTTTTACGTCTTT
ACCCAACGCTACGGCCTATCTGAATTCTCCCATCGCTACACCGAATGAGACTCCACCCGACCCGCCTGATTTAACGGATC
AAAACCGGATTACCTATATTCTGGTCAAAGCGAAATCCGGTGAAAACCTATCCGCTCTGAAAGACCGCCTAGAAGAGGCA
TTACCCGGTACCAAAGCCTTTACGCAAGCTGAACTCACAGAATTAACCCAAACCTATTGGCAGCAGAGTACTGGGGTTGG
CTATATCTTGGGTTTAGGTGCAGTGGTGGGCATTGTGGTCGGAACCGTTGTGGTGGGCCAAATTCTCTATTCTTCCGTCA
CGGACCATCTTCGAGAGTTTGGCACCATGAAGGCCATGGGATCGTCTGATTGGTATATCTATCGCGTCATCTTAGAGCAG
GCGCTGTGGATGGCGGTGTTGGGATATTTGCCGGGTATGGGACTTTGCTTAGGCTTAGGTGCTTGGACGATTCAGGCTCA
AGCGATTCAGATCTTGATTAGTCCAGCAACGGCAGCCGGAGTCTTCGTCGTCACCGTCGCCATGTGTAGTGGAGCAGCGA
TCTTTGCCATTCAAAAAGTAACTCGACTCGATCCAGCCCTCGTCTTCAAGTCGTAA

Upstream 100 bases:

>100_bases
TACTGTTAGGTGCGAAAAAAGAGTTTGCTTCCACCTAATTGAGATGATTTAAGTCCACTGGTGAGCCATTGCTCCCTAAA
TCTCCCCCCGACGTAAACGA

Downstream 100 bases:

>100_bases
ACTCATTTGGAAACAAAACTGACTCAACTGGGAAACCTGTCAAGAGAGATACACCTGATGCAACTTGCTTTTCGCCAACG
ACCTCAACCGATGACATTGA

Product: ABC transporter permease

Products: NA

Alternate protein names: ABC Transporter Permease; ABC-Transporter Membrane Spanning Component; ABC Transporter Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; ABC-Transporter Permease Protein; Efflux ABC Transporter Permease Protein; DevC-Like ABC Transporter Permease Component; Glycolipid ABC Exporter Family Permease Protein; ABC Transporter Membrane Protein; ABC-Transporter DevC-Like-Protein; ABC-Type Export System Membrane Protein; Antimicrobial Peptide ABC Transporter Permease; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC-Type Transport System Permease Component; ABC Transporter Permease Component; ABC-Transporter DevC Family Protein

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MVSIARKNLFQDLPRFIVAQAGIMFSVGLVTIQIGILNGFTRSSTVLIENADADIWVTSEELRHLALTLPLEYKQLAEAK
EVEGVDRAEPLIAQSTVWRDKSNQIAPIRIIGFDPEDTLFRPRTLLEGTLKDIQQPYKIFVDQADLKLLDVSAVGDRAEI
GSYEGEIKGITAGTRSIVASPYIFTSLPNATAYLNSPIATPNETPPDPPDLTDQNRITYILVKAKSGENLSALKDRLEEA
LPGTKAFTQAELTELTQTYWQQSTGVGYILGLGAVVGIVVGTVVVGQILYSSVTDHLREFGTMKAMGSSDWYIYRVILEQ
ALWMAVLGYLPGMGLCLGLGAWTIQAQAIQILISPATAAGVFVVTVAMCSGAAIFAIQKVTRLDPALVFKS

Sequences:

>Translated_391_residues
MVSIARKNLFQDLPRFIVAQAGIMFSVGLVTIQIGILNGFTRSSTVLIENADADIWVTSEELRHLALTLPLEYKQLAEAK
EVEGVDRAEPLIAQSTVWRDKSNQIAPIRIIGFDPEDTLFRPRTLLEGTLKDIQQPYKIFVDQADLKLLDVSAVGDRAEI
GSYEGEIKGITAGTRSIVASPYIFTSLPNATAYLNSPIATPNETPPDPPDLTDQNRITYILVKAKSGENLSALKDRLEEA
LPGTKAFTQAELTELTQTYWQQSTGVGYILGLGAVVGIVVGTVVVGQILYSSVTDHLREFGTMKAMGSSDWYIYRVILEQ
ALWMAVLGYLPGMGLCLGLGAWTIQAQAIQILISPATAAGVFVVTVAMCSGAAIFAIQKVTRLDPALVFKS
>Mature_391_residues
MVSIARKNLFQDLPRFIVAQAGIMFSVGLVTIQIGILNGFTRSSTVLIENADADIWVTSEELRHLALTLPLEYKQLAEAK
EVEGVDRAEPLIAQSTVWRDKSNQIAPIRIIGFDPEDTLFRPRTLLEGTLKDIQQPYKIFVDQADLKLLDVSAVGDRAEI
GSYEGEIKGITAGTRSIVASPYIFTSLPNATAYLNSPIATPNETPPDPPDLTDQNRITYILVKAKSGENLSALKDRLEEA
LPGTKAFTQAELTELTQTYWQQSTGVGYILGLGAVVGIVVGTVVVGQILYSSVTDHLREFGTMKAMGSSDWYIYRVILEQ
ALWMAVLGYLPGMGLCLGLGAWTIQAQAIQILISPATAAGVFVVTVAMCSGAAIFAIQKVTRLDPALVFKS

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42467; Mature: 42467

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSIARKNLFQDLPRFIVAQAGIMFSVGLVTIQIGILNGFTRSSTVLIENADADIWVTSE
CCCHHHHHHHHHHHHHHHHHCCHHHEEHHHEEEEEECCCCCCCCEEEEECCCCCEEEEHH
ELRHLALTLPLEYKQLAEAKEVEGVDRAEPLIAQSTVWRDKSNQIAPIRIIGFDPEDTLF
HHHHEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCC
RPRTLLEGTLKDIQQPYKIFVDQADLKLLDVSAVGDRAEIGSYEGEIKGITAGTRSIVAS
CCHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCCCHHHCCCCCCCEEEEECCCHHHHCC
PYIFTSLPNATAYLNSPIATPNETPPDPPDLTDQNRITYILVKAKSGENLSALKDRLEEA
CCCEECCCCCHHEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
LPGTKAFTQAELTELTQTYWQQSTGVGYILGLGAVVGIVVGTVVVGQILYSSVTDHLREF
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTMKAMGSSDWYIYRVILEQALWMAVLGYLPGMGLCLGLGAWTIQAQAIQILISPATAAG
CCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHEEEEEEEEEEEECCHHHH
VFVVTVAMCSGAAIFAIQKVTRLDPALVFKS
HHHHHHHHHCCCHHHHHHHHHHCCCHHEECC
>Mature Secondary Structure
MVSIARKNLFQDLPRFIVAQAGIMFSVGLVTIQIGILNGFTRSSTVLIENADADIWVTSE
CCCHHHHHHHHHHHHHHHHHCCHHHEEHHHEEEEEECCCCCCCCEEEEECCCCCEEEEHH
ELRHLALTLPLEYKQLAEAKEVEGVDRAEPLIAQSTVWRDKSNQIAPIRIIGFDPEDTLF
HHHHEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCC
RPRTLLEGTLKDIQQPYKIFVDQADLKLLDVSAVGDRAEIGSYEGEIKGITAGTRSIVAS
CCHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCCCHHHCCCCCCCEEEEECCCHHHHCC
PYIFTSLPNATAYLNSPIATPNETPPDPPDLTDQNRITYILVKAKSGENLSALKDRLEEA
CCCEECCCCCHHEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
LPGTKAFTQAELTELTQTYWQQSTGVGYILGLGAVVGIVVGTVVVGQILYSSVTDHLREF
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTMKAMGSSDWYIYRVILEQALWMAVLGYLPGMGLCLGLGAWTIQAQAIQILISPATAAG
CCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHEEEEEEEEEEEECCHHHH
VFVVTVAMCSGAAIFAIQKVTRLDPALVFKS
HHHHHHHHHCCCHHHHHHHHHHCCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA