| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158334747
Identifier: 158334747
GI number: 158334747
Start: 1563778
End: 1564458
Strand: Reverse
Name: 158334747
Synonym: AM1_1581
Alternate gene names: NA
Gene position: 1564458-1563778 (Counterclockwise)
Preceding gene: 158334748
Following gene: 158334744
Centisome position: 24.05
GC content: 35.39
Gene sequence:
>681_bases ATGACTTCATTACTTTCAGGTAAACGAGGTGTAGGGTCATTTGAATATAACGGAAGTACTATTTTTGTCAAGGAACATGT TGAGGCTGTTTCTCATTCTTTAAGCAATAAACGGCATGCAAACTGTTGGCAGAAAAATGTAATTTGCCAAGAAATTGAAT TAACTGAACAATGTTTTTTTGTATTTCGTTTTAAGGGACATTCTTGGACGAATGTTATAGCTAGAGATCCCAGTGGATTG GATTTTGTGACTACCAAAGAGACAAATCAAATTAATGAGGAAATACTTAAGCAGGAAATGGAGAAAGTTTATAGTCTGTG TTTAAATGAAGAAGATGCTTATTTACTCTCAATGGACCTCAAAACACGTACTATCTTTTATGGTGTCAGCGATACGATCT TAGCTTTGGGTTACCGCATCTATGAGAATGGAGAGTTGCTAGAAAAATTTGAAACAGATGAAGGATATGAAATTCTTGAA TGGGAGTCAAACATTCATGATGACAGAATTGATATAAAGGCAGAAGAGTGGGTAGATCAGTTATTTCGTCAACAAGATAT ATTTGAACCTAGCATTAACTTTAGACGTTGGGTTGGTTATGCAATGCATAAGCCGGGAGATAAAATCACTCTTAGCGACC CAAAGGGTTATTTAGAGAGAGTCGATTTTGTTGCATTATAA
Upstream 100 bases:
>100_bases TACTATTTTTTAACAAAAATATCTATCTTGTGAGCCTAAAATTATTTCTAGAGCTAGACTAGTTAATGTGTCATTATGGC AAAATGTGAAGAAGAAAAAA
Downstream 100 bases:
>100_bases ATAGCTAATTAGTCAATATATTTATTTGTAGTTATTTCTGAATGATAGGACTTGAATCAACTTCTTCCTATCATTTGGTT TAACTGGACAATTGTATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MTSLLSGKRGVGSFEYNGSTIFVKEHVEAVSHSLSNKRHANCWQKNVICQEIELTEQCFFVFRFKGHSWTNVIARDPSGL DFVTTKETNQINEEILKQEMEKVYSLCLNEEDAYLLSMDLKTRTIFYGVSDTILALGYRIYENGELLEKFETDEGYEILE WESNIHDDRIDIKAEEWVDQLFRQQDIFEPSINFRRWVGYAMHKPGDKITLSDPKGYLERVDFVAL
Sequences:
>Translated_226_residues MTSLLSGKRGVGSFEYNGSTIFVKEHVEAVSHSLSNKRHANCWQKNVICQEIELTEQCFFVFRFKGHSWTNVIARDPSGL DFVTTKETNQINEEILKQEMEKVYSLCLNEEDAYLLSMDLKTRTIFYGVSDTILALGYRIYENGELLEKFETDEGYEILE WESNIHDDRIDIKAEEWVDQLFRQQDIFEPSINFRRWVGYAMHKPGDKITLSDPKGYLERVDFVAL >Mature_225_residues TSLLSGKRGVGSFEYNGSTIFVKEHVEAVSHSLSNKRHANCWQKNVICQEIELTEQCFFVFRFKGHSWTNVIARDPSGLD FVTTKETNQINEEILKQEMEKVYSLCLNEEDAYLLSMDLKTRTIFYGVSDTILALGYRIYENGELLEKFETDEGYEILEW ESNIHDDRIDIKAEEWVDQLFRQQDIFEPSINFRRWVGYAMHKPGDKITLSDPKGYLERVDFVAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26403; Mature: 26272
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLLSGKRGVGSFEYNGSTIFVKEHVEAVSHSLSNKRHANCWQKNVICQEIELTEQCFF CCCCCCCCCCCCCEEECCEEEEHHHHHHHHHHHHCCCHHCCHHHHCCHHHHHHHHHEEEE VFRFKGHSWTNVIARDPSGLDFVTTKETNQINEEILKQEMEKVYSLCLNEEDAYLLSMDL EEEECCCCEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC KTRTIFYGVSDTILALGYRIYENGELLEKFETDEGYEILEWESNIHDDRIDIKAEEWVDQ CEEEEEECCHHHHHHHHHHEECCCHHHHHHCCCCCCEEEEECCCCCCCEEEEEHHHHHHH LFRQQDIFEPSINFRRWVGYAMHKPGDKITLSDPKGYLERVDFVAL HHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCC >Mature Secondary Structure TSLLSGKRGVGSFEYNGSTIFVKEHVEAVSHSLSNKRHANCWQKNVICQEIELTEQCFF CCCCCCCCCCCCEEECCEEEEHHHHHHHHHHHHCCCHHCCHHHHCCHHHHHHHHHEEEE VFRFKGHSWTNVIARDPSGLDFVTTKETNQINEEILKQEMEKVYSLCLNEEDAYLLSMDL EEEECCCCEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC KTRTIFYGVSDTILALGYRIYENGELLEKFETDEGYEILEWESNIHDDRIDIKAEEWVDQ CEEEEEECCHHHHHHHHHHEECCCHHHHHHCCCCCCEEEEECCCCCCCEEEEEHHHHHHH LFRQQDIFEPSINFRRWVGYAMHKPGDKITLSDPKGYLERVDFVAL HHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA