Click here to switch to the map view.

The map label for this gene is ccb2

Identifier: 158334726

GI number: 158334726

Start: 1540688

End: 1541350

Strand: Direct

Name: ccb2

Synonym: AM1_1560

Alternate gene names: NA

Gene position: 1540688-1541350 (Clockwise)

Preceding gene: 158334722

Following gene: 158334727

Centisome position: 23.69

GC content: 49.02

Gene sequence:

>663_bases
ATGACCAAGTCTGATCCCAATCGAATATTACGTTTACTGCCCTTTGCAGTTGGGGGGCTAGGCGGAACCCTACTCATGCT
GAACCGCCTACTGACCCCAAATTTAACGACATCCCAAGCTCGCTCCGATGCAGTTGGCGTCATTATCAGTGCTGTACTGA
TATTGACAGGGTTACTCTGGCAACGAGTTCAACCGCGATCACCTGAAGCGGTCGAACTGATTGGAGAACAGGGCTTTGAA
CTCGCACCTCACTTACCAGAATCCATGCAAACGGAGTTGGCTTGGGCCTCTCACATTTTGCTCACCAATACCGTTACCAA
ATCTGTGGTGATTTGGTATCGCGATCAGGTATTGCTCCGACGAGGAGTCTTAGGACCGACCTCAACGGTGAAACCTGGTG
CCATTGTTGAGCGGGTTTTGAATACTGGAAAAGCGGTCTATTTAGTAGCCCTGAAGCTTTATCCAGGCAGGGTTGAGTTC
AATTATCTCCCTGAAAATACTCAGGGTGTAATCTGCCAGCCCATTGGTCAGGAAGGCGTTCTTATTTTAGGTGCCAATGT
CCCTCGCAGCTACACCAACCAGGATGAAGCATGGGTGAGTGCGATCGCAGATAAATTAGACAATACCCTCAGCCAACAAG
AATCAACCCCCATTTCTGGATAA

Upstream 100 bases:

>100_bases
AACGCTGCACATCAATTTCAACAGAGCTATTTGTGAAGCACAACACTCTCTCCCCAACGGATTACTATAAAGATAGTCCT
GCAGTATCCACCCAAAAGGG

Downstream 100 bases:

>100_bases
TGTCTGTGGACTTTCTAAGCACTCTTCAAGACCAGCAAATCATTCTGTATTGGATCCTTATCGCCGTCATGATCATCGGC
GTTATCGGCTCCGTTGTCCC

Product: cytochrome c biogenesis protein Ccb2

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTKSDPNRILRLLPFAVGGLGGTLLMLNRLLTPNLTTSQARSDAVGVIISAVLILTGLLWQRVQPRSPEAVELIGEQGFE
LAPHLPESMQTELAWASHILLTNTVTKSVVIWYRDQVLLRRGVLGPTSTVKPGAIVERVLNTGKAVYLVALKLYPGRVEF
NYLPENTQGVICQPIGQEGVLILGANVPRSYTNQDEAWVSAIADKLDNTLSQQESTPISG

Sequences:

>Translated_220_residues
MTKSDPNRILRLLPFAVGGLGGTLLMLNRLLTPNLTTSQARSDAVGVIISAVLILTGLLWQRVQPRSPEAVELIGEQGFE
LAPHLPESMQTELAWASHILLTNTVTKSVVIWYRDQVLLRRGVLGPTSTVKPGAIVERVLNTGKAVYLVALKLYPGRVEF
NYLPENTQGVICQPIGQEGVLILGANVPRSYTNQDEAWVSAIADKLDNTLSQQESTPISG
>Mature_219_residues
TKSDPNRILRLLPFAVGGLGGTLLMLNRLLTPNLTTSQARSDAVGVIISAVLILTGLLWQRVQPRSPEAVELIGEQGFEL
APHLPESMQTELAWASHILLTNTVTKSVVIWYRDQVLLRRGVLGPTSTVKPGAIVERVLNTGKAVYLVALKLYPGRVEFN
YLPENTQGVICQPIGQEGVLILGANVPRSYTNQDEAWVSAIADKLDNTLSQQESTPISG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23918; Mature: 23787

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSDPNRILRLLPFAVGGLGGTLLMLNRLLTPNLTTSQARSDAVGVIISAVLILTGLLW
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QRVQPRSPEAVELIGEQGFELAPHLPESMQTELAWASHILLTNTVTKSVVIWYRDQVLLR
HHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHH
RGVLGPTSTVKPGAIVERVLNTGKAVYLVALKLYPGRVEFNYLPENTQGVICQPIGQEGV
HCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCEEEEEECCCCCCCEEEEECCCCCE
LILGANVPRSYTNQDEAWVSAIADKLDNTLSQQESTPISG
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TKSDPNRILRLLPFAVGGLGGTLLMLNRLLTPNLTTSQARSDAVGVIISAVLILTGLLW
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QRVQPRSPEAVELIGEQGFELAPHLPESMQTELAWASHILLTNTVTKSVVIWYRDQVLLR
HHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHH
RGVLGPTSTVKPGAIVERVLNTGKAVYLVALKLYPGRVEFNYLPENTQGVICQPIGQEGV
HCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCEEEEEECCCCCCCEEEEECCCCCE
LILGANVPRSYTNQDEAWVSAIADKLDNTLSQQESTPISG
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA