| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is fdx [C]
Identifier: 158334725
GI number: 158334725
Start: 1539495
End: 1539977
Strand: Reverse
Name: fdx [C]
Synonym: AM1_1559
Alternate gene names: 158334725
Gene position: 1539977-1539495 (Counterclockwise)
Preceding gene: 158334728
Following gene: 158334724
Centisome position: 23.68
GC content: 49.07
Gene sequence:
>483_bases ATGTCAAAGGTCGTCAGACTGGACCCGATTGGCCAAGAAGCAACTGTGAGTACCAACGATCATTTGCTGTCGGTGTTACT AAAGCAAGAATTGCAGGTCTTACAGGAATGTGGGGGCAGGGGCATGTGTGCAACTTGCCATATCTTCATCAAAGAGGGGA TGGAGCATTTATCGCCAGTGAGTCGCCGGGAACGCCGCACATTGGGGGTAATTGCAACATGCCAGCATCAGTCCCGCCTG GCTTGCCAAAGTAAGGTCGTCGGCGAAGGTGTGGTCGTAGAGCTTCCATCTGGCATGTATCTCAGTGAGATGAGTGAGAT TGAAAATCTGATTGGTCGTCGCACTGAGGAGAATATCTTGCATCCTCTTGATGGCCGAGTCCTAGTGGAGACGGGAAAAT TGATTACTCGATCCATGATTACTCAACTGAAAGAAACCCAAAGTGAAGTTGCCACTCAAGTTGCAACTTCCCAGCTGAAT TAA
Upstream 100 bases:
>100_bases CTGGCCATTGAGATAGTTCACTAGGCAATCTGTCATCACTGCTAACTAGATAGCGGCCACTGGTGAGGTTGATCAGAAAG CGATTCTGGAGAATATCTGA
Downstream 100 bases:
>100_bases ATCAATATTGATCAAGGAGATATCTCATGTTTTCACAACTCAAAAACTTGCGAATTGAAACAGATGGCCGCTATGCGACA GAACAAGAACTGGCATTCTT
Product: 2Fe-2S type ferredoxin
Products: NA
Alternate protein names: Ferredoxin 2Fe-2S Type
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSKVVRLDPIGQEATVSTNDHLLSVLLKQELQVLQECGGRGMCATCHIFIKEGMEHLSPVSRRERRTLGVIATCQHQSRL ACQSKVVGEGVVVELPSGMYLSEMSEIENLIGRRTEENILHPLDGRVLVETGKLITRSMITQLKETQSEVATQVATSQLN
Sequences:
>Translated_160_residues MSKVVRLDPIGQEATVSTNDHLLSVLLKQELQVLQECGGRGMCATCHIFIKEGMEHLSPVSRRERRTLGVIATCQHQSRL ACQSKVVGEGVVVELPSGMYLSEMSEIENLIGRRTEENILHPLDGRVLVETGKLITRSMITQLKETQSEVATQVATSQLN >Mature_159_residues SKVVRLDPIGQEATVSTNDHLLSVLLKQELQVLQECGGRGMCATCHIFIKEGMEHLSPVSRRERRTLGVIATCQHQSRLA CQSKVVGEGVVVELPSGMYLSEMSEIENLIGRRTEENILHPLDGRVLVETGKLITRSMITQLKETQSEVATQVATSQLN
Specific function: Ferredoxin Are Iron-Sulfur Proteins That Transfer Electrons In A Wide Variety Of Metabolic Reactions. Although The Function Of This Ferredoxin Is Unknown It Is Probable That It Has A Role As A Cellular Electron Transfer Protein. Involved In The In Vivo As
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17681; Mature: 17550
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVVRLDPIGQEATVSTNDHLLSVLLKQELQVLQECGGRGMCATCHIFIKEGMEHLSPV CCCCEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHH SRRERRTLGVIATCQHQSRLACQSKVVGEGVVVELPSGMYLSEMSEIENLIGRRTEENIL HHHHHHHHHHHEECCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHCC HPLDGRVLVETGKLITRSMITQLKETQSEVATQVATSQLN CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKVVRLDPIGQEATVSTNDHLLSVLLKQELQVLQECGGRGMCATCHIFIKEGMEHLSPV CCCEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHH SRRERRTLGVIATCQHQSRLACQSKVVGEGVVVELPSGMYLSEMSEIENLIGRRTEENIL HHHHHHHHHHHEECCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHCC HPLDGRVLVETGKLITRSMITQLKETQSEVATQVATSQLN CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: 2Fe-2S Cluster. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA