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The map label for this gene is ytfH [C]

Identifier: 158334718

GI number: 158334718

Start: 1532031

End: 1532396

Strand: Direct

Name: ytfH [C]

Synonym: AM1_1552

Alternate gene names: 158334718

Gene position: 1532031-1532396 (Clockwise)

Preceding gene: 158334715

Following gene: 158334721

Centisome position: 23.56

GC content: 49.18

Gene sequence:

>366_bases
ATGATGGACGATACCCAAAACTGTCTCAGCTCCTGCTGTCCGATTGAATATACCTTGGATAGAATTGGCGGCAAGTGGTC
TATTCCCATTTTGCGAGAACTGTTTAGCGGTCCCCAACGCACCCATCAACTCCAATCTGCATTACCTGGCATCAGTACCA
AAACCCTGATGGTACGTCTACGGGATTTAGAGGATCATGGCCTAGTCGAGCGGCAAGTGTTTGCAGAGGTTCCCTTGCAT
GTGGAATATTCCATCACCAACAAGGGGCGACAGATTCAACCTGTTTTAGCCGCCCTCTATCAAGTTGGACAGCAATGGCT
GCAGCAGGAAGAGTGCCATTGTCCCTTAAACGAAAAGGTAGGCTAG

Upstream 100 bases:

>100_bases
GGACTTCTGAACGAATTCTTAAATTTTGGATAATCTGTCCCCTATCCCTTGACGTCCCCTCTAGAACCGTCAGGATGGAA
GTGTACTGCCCCTGGGGTGA

Downstream 100 bases:

>100_bases
CTCTCTCAAGTCGATGACTGCGGGTAAAGCCTACAAATCGCTCTTGGGAATCTCTTCTTTAAAGTCAACGACTAACTGCA
TGGCTTCTAACACCAAGGCC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MMDDTQNCLSSCCPIEYTLDRIGGKWSIPILRELFSGPQRTHQLQSALPGISTKTLMVRLRDLEDHGLVERQVFAEVPLH
VEYSITNKGRQIQPVLAALYQVGQQWLQQEECHCPLNEKVG

Sequences:

>Translated_121_residues
MMDDTQNCLSSCCPIEYTLDRIGGKWSIPILRELFSGPQRTHQLQSALPGISTKTLMVRLRDLEDHGLVERQVFAEVPLH
VEYSITNKGRQIQPVLAALYQVGQQWLQQEECHCPLNEKVG
>Mature_121_residues
MMDDTQNCLSSCCPIEYTLDRIGGKWSIPILRELFSGPQRTHQLQSALPGISTKTLMVRLRDLEDHGLVERQVFAEVPLH
VEYSITNKGRQIQPVLAALYQVGQQWLQQEECHCPLNEKVG

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=93, Percent_Identity=35.4838709677419, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13775; Mature: 13775

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDDTQNCLSSCCPIEYTLDRIGGKWSIPILRELFSGPQRTHQLQSALPGISTKTLMVRL
CCCCHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH
RDLEDHGLVERQVFAEVPLHVEYSITNKGRQIQPVLAALYQVGQQWLQQEECHCPLNEKV
HHCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
G
C
>Mature Secondary Structure
MMDDTQNCLSSCCPIEYTLDRIGGKWSIPILRELFSGPQRTHQLQSALPGISTKTLMVRL
CCCCHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH
RDLEDHGLVERQVFAEVPLHVEYSITNKGRQIQPVLAALYQVGQQWLQQEECHCPLNEKV
HHCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]