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The map label for this gene is yjcF [C]

Identifier: 158334666

GI number: 158334666

Start: 1484157

End: 1485035

Strand: Direct

Name: yjcF [C]

Synonym: AM1_1498

Alternate gene names: 158334666

Gene position: 1484157-1485035 (Clockwise)

Preceding gene: 158334665

Following gene: 158334667

Centisome position: 22.82

GC content: 45.85

Gene sequence:

>879_bases
ATGAATCTCAAATCCTTAAACCAAGTATCAGATGCTAGCCAGGCCCCTCAAGACGATGGGCCAACAACAAAAACTCCTCT
CTCAGGTCATCAAGACCAATTATTACAGCTGGCTCAACAGCGTAACCTGGAAGCTCTGACAACACTCATCGATCAGAAGC
TAGCAGATCAGGTCGTGAAGGTCGCTGAAATTGAGTTTAAAAATGATTTGCTACAGCTCAGTGTAGAGTCCTCTGAAGTT
CCTGAACAGTCCGTGACTGTACCTCTGATACGAGATTTTTTGAGTCAATTACGATTGCCTGAAGTAACAGCAGTGACCAT
TTATGGCCAAAAATTGGGTCAAGAGCTGCCGTTTTGGATGGAAGAGGTAGCTTTGGATTTGCTGATTCTGGATACGCAAG
CCTTAATGCCTCAAACTATGGCTGCAGGAAGTGCTGAAGTTACAGATGAAGAGCCCTCCCCTTTACCTGAGGCAGCACCA
TTACCCAGTGAAACTGCCCTGGATATAACAGCAAAGTATGAAGCAGGTGAACGCAATTTTGCCCGAATCAATCTCAAGGA
TGAGGCATTGCCGGGTATTAATCTGACCTTAGCGGACTTACAAGAAGCTAATTTTGTATGGTGCAATCTAAGGGAATCGA
GTTTAAGCCATGCCAACCTTACGAGTGCCCAGTTGCGTCATGCAGATTTAACAAATGCCAATCTGCAGGGTGCAAAGTTA
CAGGGAACGGATTTGCAAGGGGCCAAGCTACAAGGGGCCAACTTAAGCTGGGCTGTTTTACGAGGCACCAACTTAACCGA
TGCAGATCTAACGGATGTTAATTTGCAAAATGCCACCCTAGAGCGTGTGATTATGCCCGATGGCACTATGCTTGATTAG

Upstream 100 bases:

>100_bases
ACAGATGATGTCATTATTTTCTAGTGAAGTAAAAGCCTTCTCTATAGATAGACGGGGATGTTTCACGCGTTAGAAAAATG
AGTGCAATTGTGCCAACCCT

Downstream 100 bases:

>100_bases
ATTATTTTGGGGCTTTACCCCCTTGTTTCTTAATAGCTATTACTCAATTTATAGGGATCTTGGATTTTCATTTATCAATG
AAATTTCAGGTACCCGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MNLKSLNQVSDASQAPQDDGPTTKTPLSGHQDQLLQLAQQRNLEALTTLIDQKLADQVVKVAEIEFKNDLLQLSVESSEV
PEQSVTVPLIRDFLSQLRLPEVTAVTIYGQKLGQELPFWMEEVALDLLILDTQALMPQTMAAGSAEVTDEEPSPLPEAAP
LPSETALDITAKYEAGERNFARINLKDEALPGINLTLADLQEANFVWCNLRESSLSHANLTSAQLRHADLTNANLQGAKL
QGTDLQGAKLQGANLSWAVLRGTNLTDADLTDVNLQNATLERVIMPDGTMLD

Sequences:

>Translated_292_residues
MNLKSLNQVSDASQAPQDDGPTTKTPLSGHQDQLLQLAQQRNLEALTTLIDQKLADQVVKVAEIEFKNDLLQLSVESSEV
PEQSVTVPLIRDFLSQLRLPEVTAVTIYGQKLGQELPFWMEEVALDLLILDTQALMPQTMAAGSAEVTDEEPSPLPEAAP
LPSETALDITAKYEAGERNFARINLKDEALPGINLTLADLQEANFVWCNLRESSLSHANLTSAQLRHADLTNANLQGAKL
QGTDLQGAKLQGANLSWAVLRGTNLTDADLTDVNLQNATLERVIMPDGTMLD
>Mature_292_residues
MNLKSLNQVSDASQAPQDDGPTTKTPLSGHQDQLLQLAQQRNLEALTTLIDQKLADQVVKVAEIEFKNDLLQLSVESSEV
PEQSVTVPLIRDFLSQLRLPEVTAVTIYGQKLGQELPFWMEEVALDLLILDTQALMPQTMAAGSAEVTDEEPSPLPEAAP
LPSETALDITAKYEAGERNFARINLKDEALPGINLTLADLQEANFVWCNLRESSLSHANLTSAQLRHADLTNANLQGAKL
QGTDLQGAKLQGANLSWAVLRGTNLTDADLTDVNLQNATLERVIMPDGTMLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 31800; Mature: 31800

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKSLNQVSDASQAPQDDGPTTKTPLSGHQDQLLQLAQQRNLEALTTLIDQKLADQVVK
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VAEIEFKNDLLQLSVESSEVPEQSVTVPLIRDFLSQLRLPEVTAVTIYGQKLGQELPFWM
HHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECHHHCCCCCHHH
EEVALDLLILDTQALMPQTMAAGSAEVTDEEPSPLPEAAPLPSETALDITAKYEAGERNF
HHHHHHHHEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCE
ARINLKDEALPGINLTLADLQEANFVWCNLRESSLSHANLTSAQLRHADLTNANLQGAKL
EEEEECCCCCCCCCEEHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCEE
QGTDLQGAKLQGANLSWAVLRGTNLTDADLTDVNLQNATLERVIMPDGTMLD
ECCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MNLKSLNQVSDASQAPQDDGPTTKTPLSGHQDQLLQLAQQRNLEALTTLIDQKLADQVVK
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VAEIEFKNDLLQLSVESSEVPEQSVTVPLIRDFLSQLRLPEVTAVTIYGQKLGQELPFWM
HHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECHHHCCCCCHHH
EEVALDLLILDTQALMPQTMAAGSAEVTDEEPSPLPEAAPLPSETALDITAKYEAGERNF
HHHHHHHHEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCE
ARINLKDEALPGINLTLADLQEANFVWCNLRESSLSHANLTSAQLRHADLTNANLQGAKL
EEEEECCCCCCCCCEEHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCEE
QGTDLQGAKLQGANLSWAVLRGTNLTDADLTDVNLQNATLERVIMPDGTMLD
ECCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]