| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158334636
Identifier: 158334636
GI number: 158334636
Start: 1454915
End: 1455640
Strand: Reverse
Name: 158334636
Synonym: AM1_1466
Alternate gene names: NA
Gene position: 1455640-1454915 (Counterclockwise)
Preceding gene: 158334637
Following gene: 158334635
Centisome position: 22.38
GC content: 47.93
Gene sequence:
>726_bases ATGTCAAAGCACATCTTAATGATCGTTTCTAACTCAGCTACCAGCACCACCGGCAAACCTGTGGGGATTTGGGCTGCTGA ACTGATCCATCCTTACGATGTGTTCAAAGCTGCTGGCTGTCAGGTAACCATCGCCAGTTCCCAGGGTGGTCCTGTTGAAC TTGACGCCCTGAGTGACCCCCGTGATTCATCGGGATTCTCATCGTTAGATATCCTCTCAGCAAAATACCTAACGCAATCG ACGTTTACGGATCAGCTATCGAATACCCCTGCGATCGCAGATCTCAATACGCACGACTATGATGCCATCTTTGTTTGTGG CGGTCAGGGAACCCTCTACACTTTCCCGGAAGACCAGGCTTTAACCGATTTATTTGTCAGCTTTTACCAAGACGAGAAAC CGAGCGCGACCCTCTGTCGAGGTGCTTGCTTACTCCTAAATGCCACCTTGGATAATGGCGAACCGTTGATTCAAGGCAAA ATGATCACGGGATTCTCCAAGAAAGAAGAGCAGTGGATGGATCAAAACGTTGGCCCGATGATGGTTCCTTTCGTTCTAGA AGAGGAGGCCAAAAAACGCGGTGCAAAATTTGTGGCGAGTTCTGCTTTCACACCATTTGCAATGCAGGACGGAAACTTGA TTACTGGCCAGCAAAGAAATTCTGGTTTCCAAACGGCGGGTTTAGTCTTAAAGGCGTTGGATTTAGACTTTGATGATTCA CACTAA
Upstream 100 bases:
>100_bases ATTCGTCAAAACATAACTAACTCAAAAAGAATTGCTGAAATAACTATTTGAACCACTGTTCAGAACTAACCCATCAACCC TATCCCCATTACTTTTCAAA
Downstream 100 bases:
>100_bases AGGCGATTCACCTTCCATTGTTCAGGCTCCTCCCTTTCATGGGGTAGGAAGAGAGTGATGGCGATTGGACAGCACTGTTC ACTTGATCATGCGGTCAAAG
Product: DJ-1/PfpI family protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; DJ-1/PfpI Family; NonF-Related Protein; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase-Like Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; Intracellular Protease/Amidase-Like; C56 Family Peptidase; Amidotransferase; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; ThiJ Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Amidotransferase/Amidase; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSKHILMIVSNSATSTTGKPVGIWAAELIHPYDVFKAAGCQVTIASSQGGPVELDALSDPRDSSGFSSLDILSAKYLTQS TFTDQLSNTPAIADLNTHDYDAIFVCGGQGTLYTFPEDQALTDLFVSFYQDEKPSATLCRGACLLLNATLDNGEPLIQGK MITGFSKKEEQWMDQNVGPMMVPFVLEEEAKKRGAKFVASSAFTPFAMQDGNLITGQQRNSGFQTAGLVLKALDLDFDDS H
Sequences:
>Translated_241_residues MSKHILMIVSNSATSTTGKPVGIWAAELIHPYDVFKAAGCQVTIASSQGGPVELDALSDPRDSSGFSSLDILSAKYLTQS TFTDQLSNTPAIADLNTHDYDAIFVCGGQGTLYTFPEDQALTDLFVSFYQDEKPSATLCRGACLLLNATLDNGEPLIQGK MITGFSKKEEQWMDQNVGPMMVPFVLEEEAKKRGAKFVASSAFTPFAMQDGNLITGQQRNSGFQTAGLVLKALDLDFDDS H >Mature_240_residues SKHILMIVSNSATSTTGKPVGIWAAELIHPYDVFKAAGCQVTIASSQGGPVELDALSDPRDSSGFSSLDILSAKYLTQST FTDQLSNTPAIADLNTHDYDAIFVCGGQGTLYTFPEDQALTDLFVSFYQDEKPSATLCRGACLLLNATLDNGEPLIQGKM ITGFSKKEEQWMDQNVGPMMVPFVLEEEAKKRGAKFVASSAFTPFAMQDGNLITGQQRNSGFQTAGLVLKALDLDFDDSH
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320742, Length=241, Percent_Identity=27.8008298755187, Blast_Score=84, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6324967, Length=220, Percent_Identity=27.7272727272727, Blast_Score=80, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6324975, Length=220, Percent_Identity=27.7272727272727, Blast_Score=80, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323984, Length=220, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26008; Mature: 25877
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHILMIVSNSATSTTGKPVGIWAAELIHPYDVFKAAGCQVTIASSQGGPVELDALSDP CCCEEEEEEECCCCCCCCCCCEEHHHHHHCHHHHHHHCCCEEEEECCCCCCEEEECCCCC RDSSGFSSLDILSAKYLTQSTFTDQLSNTPAIADLNTHDYDAIFVCGGQGTLYTFPEDQA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCCEEEECCCCHH LTDLFVSFYQDEKPSATLCRGACLLLNATLDNGEPLIQGKMITGFSKKEEQWMDQNVGPM HHHHHHHHHCCCCCCHHHHCCEEEEEEEECCCCCCEEEEEEEECCCHHHHHHHHCCCCCE MVPFVLEEEAKKRGAKFVASSAFTPFAMQDGNLITGQQRNSGFQTAGLVLKALDLDFDDS EEHHEEHHHHHHCCHHEEHHCCCCCEEECCCCEEECCCCCCCCCHHHEEEEEEECCCCCC H C >Mature Secondary Structure SKHILMIVSNSATSTTGKPVGIWAAELIHPYDVFKAAGCQVTIASSQGGPVELDALSDP CCEEEEEEECCCCCCCCCCCEEHHHHHHCHHHHHHHCCCEEEEECCCCCCEEEECCCCC RDSSGFSSLDILSAKYLTQSTFTDQLSNTPAIADLNTHDYDAIFVCGGQGTLYTFPEDQA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCCEEEECCCCHH LTDLFVSFYQDEKPSATLCRGACLLLNATLDNGEPLIQGKMITGFSKKEEQWMDQNVGPM HHHHHHHHHCCCCCCHHHHCCEEEEEEEECCCCCCEEEEEEEECCCHHHHHHHHCCCCCE MVPFVLEEEAKKRGAKFVASSAFTPFAMQDGNLITGQQRNSGFQTAGLVLKALDLDFDDS EEHHEEHHHHHHCCHHEEHHCCCCCEEECCCCEEECCCCCCCCCHHHEEEEEEECCCCCC H C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA