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The map label for this gene is hspC2 [H]

Identifier: 158334634

GI number: 158334634

Start: 1454103

End: 1454567

Strand: Reverse

Name: hspC2 [H]

Synonym: AM1_1464

Alternate gene names: 158334634

Gene position: 1454567-1454103 (Counterclockwise)

Preceding gene: 158334635

Following gene: 158334633

Centisome position: 22.37

GC content: 52.47

Gene sequence:

>465_bases
ATGATTCGTTACTGGAATCCGATTGAAGAAGCAGATGCGATCCGTCATCAACTCGATCGCCTCTTTGACGGTATGTTGGA
TACGGACACGTCCACCGTCAATTGGTCCCCTGCAATTGAAGTCTGGGACCAAGGCAATGCCCTGGTCCTCAAAGCCTTCT
TGCCAGGGGTTAAGGCGGACGATTTGGATATTCAGGTGACTCGAAAGTCCGTTTCCCTGTCAGGTCAGCGCCATGCCGAG
GACCTACCAGAAGATGCCAAGCGCCTCTACTCTGACATCCGTTATGGACAGTTCCAACGGGCCACCAAGCTGCCGGTGGA
AGTGCAAAACACCAAAGTAGATGCATCCTTTGAGCAAGGTTTGCTCACCCTCACCCTGCCCAAGGTTGAAGCCGAACAAC
ACAAAGTGGTGAAGGTTAACTTGACTGGCGAGTCACCTGCGATTGATGCAGCTGACGATGCCTAA

Upstream 100 bases:

>100_bases
TTCGATCACCCCTTGGGTATTGCATATTGGATGTAACGAAACAAACAGAGCGGTTGTTACCGCTTCACTGATAACAGCCA
ATGCGAGGTACAAAACTATG

Downstream 100 bases:

>100_bases
CCGCCAGCTCTCTCTCTTGGGTCTAACGATTGACTGGACCGAGTTCTAGTAATACCTGCCTCGAGGGGTAAAATGCTCCT
CGAGGTTTTTTTTGCGTGAA

Product: heat shock protein (HSP20) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIRYWNPIEEADAIRHQLDRLFDGMLDTDTSTVNWSPAIEVWDQGNALVLKAFLPGVKADDLDIQVTRKSVSLSGQRHAE
DLPEDAKRLYSDIRYGQFQRATKLPVEVQNTKVDASFEQGLLTLTLPKVEAEQHKVVKVNLTGESPAIDAADDA

Sequences:

>Translated_154_residues
MIRYWNPIEEADAIRHQLDRLFDGMLDTDTSTVNWSPAIEVWDQGNALVLKAFLPGVKADDLDIQVTRKSVSLSGQRHAE
DLPEDAKRLYSDIRYGQFQRATKLPVEVQNTKVDASFEQGLLTLTLPKVEAEQHKVVKVNLTGESPAIDAADDA
>Mature_154_residues
MIRYWNPIEEADAIRHQLDRLFDGMLDTDTSTVNWSPAIEVWDQGNALVLKAFLPGVKADDLDIQVTRKSVSLSGQRHAE
DLPEDAKRLYSDIRYGQFQRATKLPVEVQNTKVDASFEQGLLTLTLPKVEAEQHKVVKVNLTGESPAIDAADDA

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17231; Mature: 17231

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRYWNPIEEADAIRHQLDRLFDGMLDTDTSTVNWSPAIEVWDQGNALVLKAFLPGVKAD
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEECCCCEEEEEEECCCCCCC
DLDIQVTRKSVSLSGQRHAEDLPEDAKRLYSDIRYGQFQRATKLPVEVQNTKVDASFEQG
CCEEEEEECEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCEEEECCEECCHHHCC
LLTLTLPKVEAEQHKVVKVNLTGESPAIDAADDA
EEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MIRYWNPIEEADAIRHQLDRLFDGMLDTDTSTVNWSPAIEVWDQGNALVLKAFLPGVKAD
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEECCCCEEEEEEECCCCCCC
DLDIQVTRKSVSLSGQRHAEDLPEDAKRLYSDIRYGQFQRATKLPVEVQNTKVDASFEQG
CCEEEEEECEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCEEEECCEECCHHHCC
LLTLTLPKVEAEQHKVVKVNLTGESPAIDAADDA
EEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA