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The map label for this gene is yjdA [C]

Identifier: 158334596

GI number: 158334596

Start: 1417396

End: 1419477

Strand: Reverse

Name: yjdA [C]

Synonym: AM1_1426

Alternate gene names: 158334596

Gene position: 1419477-1417396 (Counterclockwise)

Preceding gene: 158334597

Following gene: 158334594

Centisome position: 21.83

GC content: 46.21

Gene sequence:

>2082_bases
ATGAGTAATCCCGTCGAAACCGCTAGTTTCCTGGAAGATTTAGATCGCATTTCACAGATCCGTCAGGAAATCGCCTCCCA
CCTATCCAGCATTGCCGAAACCTTAGAAGATGCCGAACGGGCTGGAGAGTCCGCCTCTGGATCATTGCAGCTTCAACAAG
AAATTGAAGACGTGAGTGTCGCCTGCCGCAATTTAAAGCAGGGAGTTTTTCGGTTGATGGTTCTAGGAGATATGAAGCGA
GGGAAAAGCACCTTCCTCAACGCTTTGATTGGAGAAAACTTACTGCCCAGTGACGTCAATCCCTGTACAGCCCTGCTGAC
CATCTTGCGATATGGTCCCGATAAAACTGTAACCGTCCACTTCAATGATGGTAAATCCCCCGAACAAATTGACTTTGCTA
GCTTTAAAGACCGCTACACCATTGACCCAGAAGAAGCAAAGCAGCTAGAAGAACAAAAGCAGATTGCCTTCCCAGATGTG
AGCCATGCCGTGGTCGAGTATCCGCTGCCGTTGTTAGAGAAAGGGGTTGAGATTGTCGATAGCCCAGGCTTAAACGATAC
GGAAGCCAGAAACGATCTCTCCTTAGGTTTTATCCAAAATTGTCATGCCATTCTCTTTGTACTGCGAGCCACTCAGCCTT
GCACCCTGGCTGAACGCCGCTACCTCGAAAACTACATCAAAGATCGGGGACTGTCGATCTTCTTTTTAATTAATGCTTGG
GATCAAATTAAGGAAAGTCTGATTGACCCAGATGATCCAGAAGAACTAGAAGATGCCACTCGTAAACTCCATAAAGTCTT
CCATGCCAATCTTGCAGAATACTGCCAAATCGACGGCTATGACCTCTATGAAGAGCGGGTATTTCCCATCTCAGCTTTGC
AGGCCCTCCGTAAGCGAGTTAAAGATACGGATGCTAACCTAGAGGGCACTGGTTTTCCTGACTTTTTGTCCTCACTTAAT
ACCTTTCTGACTCAAGAACGAGCGATTGCTGAATTGCGACAAGCCCGGACCCTAGCTCGTCAAGCTCTTAATCGAGTTGA
GGATGCTACAGCTCGACGAATTCCCCTTTTAGATCAGAGCGTTCAGGAATTAGAACAACGGATTGAGTCTGTAGAACCAG
AATTTGGAGATTTGAAAGAAATTGGTGAGAACTTTAAAGAAGATATTCATCGGATGCGAGATCAGCGATCGCGTTCGATT
GCCGATTCATTTCGCACCTATATATTCGATTTAGAAACTACTTTCGATCAAGACTTCCTGAAATATCAACCCCCCGATCT
AGAGCTGCTGGATCTATTCAGCCAAGGACGACGGGAAGCCTTTAACGCTGCTTTTCAACAAGCTTTTCAGCAATATGTCA
ATGATAAGTTCTTTGCCTGGAGCATCCGAGCTGAGCGCGATCTCAAATATGCCTTCGAAGAACTGTCTAGAAGCGCTGAG
CAATACGGTAACTCCTATGCCAGAATTACCGACCGAATTACCGAAAAATTGACGGGGCAAAATATGAATGCTCGTGGTCC
CAAACACCAATCCAATGACAATGTACCTGGATGGGCTAAATGGGCAATGGGCTTATTCTCCCTTGCCTCTGGCAATATTG
GCGGGGCAGCAATGGCAGTCACAGGATTTGACTTCCAGAGTATTATGCTCAACTTCTTTACCTCTGCTGGAATCGCTCTG
ATTGCTTCATCTGTGTTTGGCATTATGTTGGGACCCATCACCTTTGCCTTGGTGGGCTTAGGTATTGGTGCGTTGCAAGC
GGATCATGCTCGCAAACAATTGACCAAGGCGACGAAAGAAGAATTTGTAAAATGTCTACCCCAAATTGCTCAAGAAAAAT
ACCAGCCTATTTACAACTCGGTCCAAGACTGTTTTGATGCCTACAACCAAGAGGTGATGCAGCGCTTACAAGAAGATATC
CAGTCTCGCAAACAAGAGTTGGATAACCTCCTAGAGCAGAAAAACTCACGAGAGATCGATCGCCAAACGGAAGTTGCCCG
TTTAGAGAACTTAGAGCAAGCGGTTTCTACAGACTGTGAGCTGATCGAGACGGCCTATCAGAATCTATTAGCTACGGCAT
AA

Upstream 100 bases:

>100_bases
GAGTCTGCCTAGTGAAGAGTTGGTAGACCCTCTCAGACTTATCGGTGGATTTAAAAATGCAGATGGGTATGCTGAAAAAG
CAGCCTTACCTTCCTCCACT

Downstream 100 bases:

>100_bases
TGCTGGTGTTGATTCAGAATGCTGGCCTTTGGCGAGGCGGTTCTTTCCTGCCAATGCTATTTGGGCTAGCGTTCTACCGC
ACCTAAAATTTTGAGTGTCT

Product: dynamin-like protein

Products: NA

Alternate protein names: ORF6 [H]

Number of amino acids: Translated: 693; Mature: 692

Protein sequence:

>693_residues
MSNPVETASFLEDLDRISQIRQEIASHLSSIAETLEDAERAGESASGSLQLQQEIEDVSVACRNLKQGVFRLMVLGDMKR
GKSTFLNALIGENLLPSDVNPCTALLTILRYGPDKTVTVHFNDGKSPEQIDFASFKDRYTIDPEEAKQLEEQKQIAFPDV
SHAVVEYPLPLLEKGVEIVDSPGLNDTEARNDLSLGFIQNCHAILFVLRATQPCTLAERRYLENYIKDRGLSIFFLINAW
DQIKESLIDPDDPEELEDATRKLHKVFHANLAEYCQIDGYDLYEERVFPISALQALRKRVKDTDANLEGTGFPDFLSSLN
TFLTQERAIAELRQARTLARQALNRVEDATARRIPLLDQSVQELEQRIESVEPEFGDLKEIGENFKEDIHRMRDQRSRSI
ADSFRTYIFDLETTFDQDFLKYQPPDLELLDLFSQGRREAFNAAFQQAFQQYVNDKFFAWSIRAERDLKYAFEELSRSAE
QYGNSYARITDRITEKLTGQNMNARGPKHQSNDNVPGWAKWAMGLFSLASGNIGGAAMAVTGFDFQSIMLNFFTSAGIAL
IASSVFGIMLGPITFALVGLGIGALQADHARKQLTKATKEEFVKCLPQIAQEKYQPIYNSVQDCFDAYNQEVMQRLQEDI
QSRKQELDNLLEQKNSREIDRQTEVARLENLEQAVSTDCELIETAYQNLLATA

Sequences:

>Translated_693_residues
MSNPVETASFLEDLDRISQIRQEIASHLSSIAETLEDAERAGESASGSLQLQQEIEDVSVACRNLKQGVFRLMVLGDMKR
GKSTFLNALIGENLLPSDVNPCTALLTILRYGPDKTVTVHFNDGKSPEQIDFASFKDRYTIDPEEAKQLEEQKQIAFPDV
SHAVVEYPLPLLEKGVEIVDSPGLNDTEARNDLSLGFIQNCHAILFVLRATQPCTLAERRYLENYIKDRGLSIFFLINAW
DQIKESLIDPDDPEELEDATRKLHKVFHANLAEYCQIDGYDLYEERVFPISALQALRKRVKDTDANLEGTGFPDFLSSLN
TFLTQERAIAELRQARTLARQALNRVEDATARRIPLLDQSVQELEQRIESVEPEFGDLKEIGENFKEDIHRMRDQRSRSI
ADSFRTYIFDLETTFDQDFLKYQPPDLELLDLFSQGRREAFNAAFQQAFQQYVNDKFFAWSIRAERDLKYAFEELSRSAE
QYGNSYARITDRITEKLTGQNMNARGPKHQSNDNVPGWAKWAMGLFSLASGNIGGAAMAVTGFDFQSIMLNFFTSAGIAL
IASSVFGIMLGPITFALVGLGIGALQADHARKQLTKATKEEFVKCLPQIAQEKYQPIYNSVQDCFDAYNQEVMQRLQEDI
QSRKQELDNLLEQKNSREIDRQTEVARLENLEQAVSTDCELIETAYQNLLATA
>Mature_692_residues
SNPVETASFLEDLDRISQIRQEIASHLSSIAETLEDAERAGESASGSLQLQQEIEDVSVACRNLKQGVFRLMVLGDMKRG
KSTFLNALIGENLLPSDVNPCTALLTILRYGPDKTVTVHFNDGKSPEQIDFASFKDRYTIDPEEAKQLEEQKQIAFPDVS
HAVVEYPLPLLEKGVEIVDSPGLNDTEARNDLSLGFIQNCHAILFVLRATQPCTLAERRYLENYIKDRGLSIFFLINAWD
QIKESLIDPDDPEELEDATRKLHKVFHANLAEYCQIDGYDLYEERVFPISALQALRKRVKDTDANLEGTGFPDFLSSLNT
FLTQERAIAELRQARTLARQALNRVEDATARRIPLLDQSVQELEQRIESVEPEFGDLKEIGENFKEDIHRMRDQRSRSIA
DSFRTYIFDLETTFDQDFLKYQPPDLELLDLFSQGRREAFNAAFQQAFQQYVNDKFFAWSIRAERDLKYAFEELSRSAEQ
YGNSYARITDRITEKLTGQNMNARGPKHQSNDNVPGWAKWAMGLFSLASGNIGGAAMAVTGFDFQSIMLNFFTSAGIALI
ASSVFGIMLGPITFALVGLGIGALQADHARKQLTKATKEEFVKCLPQIAQEKYQPIYNSVQDCFDAYNQEVMQRLQEDIQ
SRKQELDNLLEQKNSREIDRQTEVARLENLEQAVSTDCELIETAYQNLLATA

Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. [C]

COG id: COG0699

COG function: function code R; Predicted GTPases (dynamin-related)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.genitalium MG148 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001401 [H]

Pfam domain/function: PF00350 Dynamin_N [H]

EC number: NA

Molecular weight: Translated: 78571; Mature: 78440

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPVETASFLEDLDRISQIRQEIASHLSSIAETLEDAERAGESASGSLQLQQEIEDVSV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ACRNLKQGVFRLMVLGDMKRGKSTFLNALIGENLLPSDVNPCTALLTILRYGPDKTVTVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE
FNDGKSPEQIDFASFKDRYTIDPEEAKQLEEQKQIAFPDVSHAVVEYPLPLLEKGVEIVD
ECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHCCCHHHC
SPGLNDTEARNDLSLGFIQNCHAILFVLRATQPCTLAERRYLENYIKDRGLSIFFLINAW
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCH
DQIKESLIDPDDPEELEDATRKLHKVFHANLAEYCQIDGYDLYEERVFPISALQALRKRV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHH
KDTDANLEGTGFPDFLSSLNTFLTQERAIAELRQARTLARQALNRVEDATARRIPLLDQS
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VQELEQRIESVEPEFGDLKEIGENFKEDIHRMRDQRSRSIADSFRTYIFDLETTFDQDFL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYQPPDLELLDLFSQGRREAFNAAFQQAFQQYVNDKFFAWSIRAERDLKYAFEELSRSAE
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHH
QYGNSYARITDRITEKLTGQNMNARGPKHQSNDNVPGWAKWAMGLFSLASGNIGGAAMAV
HHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHEE
TGFDFQSIMLNFFTSAGIALIASSVFGIMLGPITFALVGLGIGALQADHARKQLTKATKE
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFVKCLPQIAQEKYQPIYNSVQDCFDAYNQEVMQRLQEDIQSRKQELDNLLEQKNSREID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RQTEVARLENLEQAVSTDCELIETAYQNLLATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNPVETASFLEDLDRISQIRQEIASHLSSIAETLEDAERAGESASGSLQLQQEIEDVSV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ACRNLKQGVFRLMVLGDMKRGKSTFLNALIGENLLPSDVNPCTALLTILRYGPDKTVTVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE
FNDGKSPEQIDFASFKDRYTIDPEEAKQLEEQKQIAFPDVSHAVVEYPLPLLEKGVEIVD
ECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHCCCHHHC
SPGLNDTEARNDLSLGFIQNCHAILFVLRATQPCTLAERRYLENYIKDRGLSIFFLINAW
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCH
DQIKESLIDPDDPEELEDATRKLHKVFHANLAEYCQIDGYDLYEERVFPISALQALRKRV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHH
KDTDANLEGTGFPDFLSSLNTFLTQERAIAELRQARTLARQALNRVEDATARRIPLLDQS
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VQELEQRIESVEPEFGDLKEIGENFKEDIHRMRDQRSRSIADSFRTYIFDLETTFDQDFL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYQPPDLELLDLFSQGRREAFNAAFQQAFQQYVNDKFFAWSIRAERDLKYAFEELSRSAE
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHH
QYGNSYARITDRITEKLTGQNMNARGPKHQSNDNVPGWAKWAMGLFSLASGNIGGAAMAV
HHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHEE
TGFDFQSIMLNFFTSAGIALIASSVFGIMLGPITFALVGLGIGALQADHARKQLTKATKE
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFVKCLPQIAQEKYQPIYNSVQDCFDAYNQEVMQRLQEDIQSRKQELDNLLEQKNSREID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RQTEVARLENLEQAVSTDCELIETAYQNLLATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8920183 [H]