| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158334486
Identifier: 158334486
GI number: 158334486
Start: 1296434
End: 1296961
Strand: Reverse
Name: 158334486
Synonym: AM1_1310
Alternate gene names: NA
Gene position: 1296961-1296434 (Counterclockwise)
Preceding gene: 158334489
Following gene: 158334482
Centisome position: 19.94
GC content: 46.97
Gene sequence:
>528_bases GTGGGTAATGAAATTATCGGGGAAGGCATCATCGATAGCACAAGCCTGTCACTGTTTAAAAAAGCCATTGAAACTGCTCC AGACGCGAAGACTCTTGTCTTAAAGAATGTCGGTGGTTCAGTCAATGATGAGGCAAACCGGATATTTGCCAGCTTTGTAC ACAGTCAAGGTTTCGCAACACATGTCCCAGGTAATGGCATGGTAGCCTCTGGCGGAACAGACCTATTTCTTGCAGGTGTT TCCCGAACGATTGAAAAGGGTGCTTGTATCGGTGTTCACAGCTGGGCCGCTGGGACAAATGAGAATTCCCTTCGTGGCAA CCAAGTTCCGCGCGATCATGATCTCCATAAGCCCTATCTTACCTATTATGATTACGTAGGAATTCCTCGTTCCTTCTATT GGTTCACATTAGAAGCTGCTCCAGCTGACAGCATGCACTGGATGTCTCGGGAAAAAGTAATTGAATATAAAATGACAACG CAACCCCCTGGTGACCTGAGTAGCGATCCAATTTGCAACGAGCGCTAG
Upstream 100 bases:
>100_bases GAATAAATTGCTGACAACCATAAGCCTAGTTGCTAACTTCTCCATAACAGCATGCACCAGTTCTGAGCTTGAAGACTACG AAACCCTTGAGTTTACCGTT
Downstream 100 bases:
>100_bases TCTCGAAATGGACTTTGTTCAGAAATGGCCAAAAATGGGTAACACTCGCACGACAAATCAGGCCATCTCTAGAAATGACC AGTCCAGATTTTATTGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MGNEIIGEGIIDSTSLSLFKKAIETAPDAKTLVLKNVGGSVNDEANRIFASFVHSQGFATHVPGNGMVASGGTDLFLAGV SRTIEKGACIGVHSWAAGTNENSLRGNQVPRDHDLHKPYLTYYDYVGIPRSFYWFTLEAAPADSMHWMSREKVIEYKMTT QPPGDLSSDPICNER
Sequences:
>Translated_175_residues MGNEIIGEGIIDSTSLSLFKKAIETAPDAKTLVLKNVGGSVNDEANRIFASFVHSQGFATHVPGNGMVASGGTDLFLAGV SRTIEKGACIGVHSWAAGTNENSLRGNQVPRDHDLHKPYLTYYDYVGIPRSFYWFTLEAAPADSMHWMSREKVIEYKMTT QPPGDLSSDPICNER >Mature_174_residues GNEIIGEGIIDSTSLSLFKKAIETAPDAKTLVLKNVGGSVNDEANRIFASFVHSQGFATHVPGNGMVASGGTDLFLAGVS RTIEKGACIGVHSWAAGTNENSLRGNQVPRDHDLHKPYLTYYDYVGIPRSFYWFTLEAAPADSMHWMSREKVIEYKMTTQ PPGDLSSDPICNER
Specific function: Unknown
COG id: COG3904
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19081; Mature: 18949
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNEIIGEGIIDSTSLSLFKKAIETAPDAKTLVLKNVGGSVNDEANRIFASFVHSQGFAT CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEE HVPGNGMVASGGTDLFLAGVSRTIEKGACIGVHSWAAGTNENSLRGNQVPRDHDLHKPYL ECCCCCEEECCCCEEEEECHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH TYYDYVGIPRSFYWFTLEAAPADSMHWMSREKVIEYKMTTQPPGDLSSDPICNER HHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure GNEIIGEGIIDSTSLSLFKKAIETAPDAKTLVLKNVGGSVNDEANRIFASFVHSQGFAT CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEE HVPGNGMVASGGTDLFLAGVSRTIEKGACIGVHSWAAGTNENSLRGNQVPRDHDLHKPYL ECCCCCEEECCCCEEEEECHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH TYYDYVGIPRSFYWFTLEAAPADSMHWMSREKVIEYKMTTQPPGDLSSDPICNER HHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA