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The map label for this gene is padR [H]

Identifier: 158334450

GI number: 158334450

Start: 1259440

End: 1259973

Strand: Reverse

Name: padR [H]

Synonym: AM1_1271

Alternate gene names: 158334450

Gene position: 1259973-1259440 (Counterclockwise)

Preceding gene: 158334456

Following gene: 158334448

Centisome position: 19.37

GC content: 50.0

Gene sequence:

>534_bases
ATGAGTCTTTCCTACGCAATCTTGGCAACCTTGACGGATCTAGCCTGCAGTGGCTATGAGTTGGCGAAGCGGTTTGATGG
TTCGGTGGGCCATTTCTGGTCTGCGAGTCATCAGCAGATCTATCGAGAGCTCAACCGGTTAGAGGAACGGCAGTGGATCA
CGGGTGAGGTTATTCCCCAAACGGGACGCCCTGACAAAAAGTGCTATCACCTGACTGAAATGGGCAAGGTGGAGATGGCT
AAGTGGATTGCCCAGCCCAGTAAAAGCAGCCGCACTAAGGAAGAAATCCTCGTGAAGCTGTTTGCCGGGGATTTGGTAGA
GCCTGAGATATTGCTAGCAGAACTCCGTCGTTACCATCAGGAACATGAGCAGCAGTTGCAGATCTATCAGCAGATTGAGC
AGCAGCATTTTGCTGATCCAGAAAAATTATCCTGGGGGGCCAAGTGCCAGTATTTAACGCTACGTCAAGGTATTCGTTAT
GAGATAGATGTGATCGCTTGGTGCAAGGAAGCCTTGACTTTATTAAGGGCCTGA

Upstream 100 bases:

>100_bases
TGATCATAGGTGGGTCTCCTAGGCAACGCAGACGATGTAATATGCAACAAAGTGCATATTCTCACTATATGCAATTATTT
GAATATGTCAATCAGTGCAT

Downstream 100 bases:

>100_bases
GATCTACAACAATACTGTAAAATTCCAAAACTCAGGGGTCGAGATCAGCAATCATCTTATTCTATAGGCTTTAGGGGAAA
TAGAGGCAGAGGGCTTGGCT

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSLSYAILATLTDLACSGYELAKRFDGSVGHFWSASHQQIYRELNRLEERQWITGEVIPQTGRPDKKCYHLTEMGKVEMA
KWIAQPSKSSRTKEEILVKLFAGDLVEPEILLAELRRYHQEHEQQLQIYQQIEQQHFADPEKLSWGAKCQYLTLRQGIRY
EIDVIAWCKEALTLLRA

Sequences:

>Translated_177_residues
MSLSYAILATLTDLACSGYELAKRFDGSVGHFWSASHQQIYRELNRLEERQWITGEVIPQTGRPDKKCYHLTEMGKVEMA
KWIAQPSKSSRTKEEILVKLFAGDLVEPEILLAELRRYHQEHEQQLQIYQQIEQQHFADPEKLSWGAKCQYLTLRQGIRY
EIDVIAWCKEALTLLRA
>Mature_176_residues
SLSYAILATLTDLACSGYELAKRFDGSVGHFWSASHQQIYRELNRLEERQWITGEVIPQTGRPDKKCYHLTEMGKVEMAK
WIAQPSKSSRTKEEILVKLFAGDLVEPEILLAELRRYHQEHEQQLQIYQQIEQQHFADPEKLSWGAKCQYLTLRQGIRYE
IDVIAWCKEALTLLRA

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 20654; Mature: 20523

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSYAILATLTDLACSGYELAKRFDGSVGHFWSASHQQIYRELNRLEERQWITGEVIPQ
CCCHHHHHHHHHHHHHCHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC
TGRPDKKCYHLTEMGKVEMAKWIAQPSKSSRTKEEILVKLFAGDLVEPEILLAELRRYHQ
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EHEQQLQIYQQIEQQHFADPEKLSWGAKCQYLTLRQGIRYEIDVIAWCKEALTLLRA
HHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLSYAILATLTDLACSGYELAKRFDGSVGHFWSASHQQIYRELNRLEERQWITGEVIPQ
CCHHHHHHHHHHHHHCHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC
TGRPDKKCYHLTEMGKVEMAKWIAQPSKSSRTKEEILVKLFAGDLVEPEILLAELRRYHQ
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EHEQQLQIYQQIEQQHFADPEKLSWGAKCQYLTLRQGIRYEIDVIAWCKEALTLLRA
HHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]