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The map label for this gene is ychJ [H]

Identifier: 158334447

GI number: 158334447

Start: 1256141

End: 1256641

Strand: Reverse

Name: ychJ [H]

Synonym: AM1_1268

Alternate gene names: 158334447

Gene position: 1256641-1256141 (Counterclockwise)

Preceding gene: 158334448

Following gene: 158334446

Centisome position: 19.32

GC content: 47.9

Gene sequence:

>501_bases
ATGCTGATCTCTGGCGATCGCAACACCTTGATGCCTTGCCCCTGTGGCAGTCAAAAGTTATTCAACCAGTGCTGCGGTGT
TTATTTACAAGGGTCACGCCCTGCTCCCACCGCTGAAACACTGATGCGATCTCGCTACGTTGCCTATTGCCTCAAGAATA
TCGATTACCTATTCAATACCGAACATCCCAATCATCGCCAACCCAATAGCCGACAATTGATCGCTGCCACTGCCAATAAT
TTGACTTGGTTGGGTTTAACTGTGCTTGCCACTAAAGCTGGACAACCTGAAGATAAAACCGGGATTGTTGAGTTCTTTGC
GGTGTACCAAGAAGGGAACTCTGCAGCCCAACTCCACGAGCGATCGCGCTTTATCAAAGAAAAAGGCCAATGGCTTTACA
CCGATGGAGATAGGTTACCGCCCTTCCAGCCGAAAAAGAATGAACCCTGTTGGTGTAAAAGCGGCAAAAAGTTCAAACAG
TGCCACCGCAAGAAAAACTAA

Upstream 100 bases:

>100_bases
CTTATGAACAAATGGCTTCTATGATCAATGATGGTGCTCGGCTTTGACCTATTACACCTAATGAGATTGAAGATCTAGCG
TTATCTGTCGAAATTAAATC

Downstream 100 bases:

>100_bases
AAGCTCTAACGTCTACAATCACCCAGCGGCGACAAGGGCTTGTCTATGCAAAATACGCTCAATTTATTTGCTCGATTGTG
TTGTGTTGTTAGGTGGCCCA

Product: SecC motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MLISGDRNTLMPCPCGSQKLFNQCCGVYLQGSRPAPTAETLMRSRYVAYCLKNIDYLFNTEHPNHRQPNSRQLIAATANN
LTWLGLTVLATKAGQPEDKTGIVEFFAVYQEGNSAAQLHERSRFIKEKGQWLYTDGDRLPPFQPKKNEPCWCKSGKKFKQ
CHRKKN

Sequences:

>Translated_166_residues
MLISGDRNTLMPCPCGSQKLFNQCCGVYLQGSRPAPTAETLMRSRYVAYCLKNIDYLFNTEHPNHRQPNSRQLIAATANN
LTWLGLTVLATKAGQPEDKTGIVEFFAVYQEGNSAAQLHERSRFIKEKGQWLYTDGDRLPPFQPKKNEPCWCKSGKKFKQ
CHRKKN
>Mature_166_residues
MLISGDRNTLMPCPCGSQKLFNQCCGVYLQGSRPAPTAETLMRSRYVAYCLKNIDYLFNTEHPNHRQPNSRQLIAATANN
LTWLGLTVLATKAGQPEDKTGIVEFFAVYQEGNSAAQLHERSRFIKEKGQWLYTDGDRLPPFQPKKNEPCWCKSGKKFKQ
CHRKKN

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=149, Percent_Identity=45.6375838926174, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 18927; Mature: 18927

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISGDRNTLMPCPCGSQKLFNQCCGVYLQGSRPAPTAETLMRSRYVAYCLKNIDYLFNT
CEECCCCCCCCCCCCCCHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECC
EHPNHRQPNSRQLIAATANNLTWLGLTVLATKAGQPEDKTGIVEFFAVYQEGNSAAQLHE
CCCCCCCCCCCEEEEEECCCEEEEHHHEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHH
RSRFIKEKGQWLYTDGDRLPPFQPKKNEPCWCKSGKKFKQCHRKKN
HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLISGDRNTLMPCPCGSQKLFNQCCGVYLQGSRPAPTAETLMRSRYVAYCLKNIDYLFNT
CEECCCCCCCCCCCCCCHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECC
EHPNHRQPNSRQLIAATANNLTWLGLTVLATKAGQPEDKTGIVEFFAVYQEGNSAAQLHE
CCCCCCCCCCCEEEEEECCCEEEEHHHEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHH
RSRFIKEKGQWLYTDGDRLPPFQPKKNEPCWCKSGKKFKQCHRKKN
HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA