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The map label for this gene is ynhG [C]

Identifier: 158334425

GI number: 158334425

Start: 1232185

End: 1232727

Strand: Reverse

Name: ynhG [C]

Synonym: AM1_1246

Alternate gene names: 158334425

Gene position: 1232727-1232185 (Counterclockwise)

Preceding gene: 158334426

Following gene: 158334423

Centisome position: 18.95

GC content: 54.14

Gene sequence:

>543_bases
ATGCGTCATTCTTCGATAAAACTGATTGCCCTGAGCGTGGTGGCAGGTGCTTTAGCCCTGGGCCAGCCGGTACGAGCCGT
AGAAGAAATTGCGATCGCACCGCCGTTGCCGGGCCTCGACAATGTGACGGATCATTTGCCTCCCGCTGTTGACCCTATGC
GGTTGGAGCTAAATTTGTCCAAGCGGCGAGTGACAGTGTATCAGCATGACCAAGCCGTTAAGTCGTATCCCGTTGCGATT
GGACGAGCTGGTTGGGCAACCCCGGCAGGGGATTTTGAGGTTAAAACGAAATACCGCAATCCACCCTGGCTTCATCCTTT
TAAGGGCTATGTGATTCCTGGGGGTGATCCAGAAAATCCCCTCGGTCGTCGGTGGATGGGATTCTGGACCGATGGTAATA
ACTGGATTGGCTTTCACGGTACGCCCAATCGTGATTCCGTGGGTCGATCTGCCTCTCACGGCTGCGTCCGGATGTATGAC
GAGGACATTGAAGAAATGTATGAACTCGTCGCCGTGGGGACGCCTGTAAAGGTGATTCGCTAA

Upstream 100 bases:

>100_bases
GGGAAATCTAAAGGTTGGGAACAGAATCGGTCTTTTTCTATTCGCTAGAATAGAATAGCCATTCTAAAACTTGGCTTGCT
GAAGATAATCGATCTGGATC

Downstream 100 bases:

>100_bases
CGAGACAATTAATCTTGAGAGCATTAACCCTGCCCTAACTGGGCAGGGTTGGCGCTTTTTTAGCCCAGTCGTTTTTCGAT
TTCAGCTTTGACGGCATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Spore protein YkuD homolog [H]

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRHSSIKLIALSVVAGALALGQPVRAVEEIAIAPPLPGLDNVTDHLPPAVDPMRLELNLSKRRVTVYQHDQAVKSYPVAI
GRAGWATPAGDFEVKTKYRNPPWLHPFKGYVIPGGDPENPLGRRWMGFWTDGNNWIGFHGTPNRDSVGRSASHGCVRMYD
EDIEEMYELVAVGTPVKVIR

Sequences:

>Translated_180_residues
MRHSSIKLIALSVVAGALALGQPVRAVEEIAIAPPLPGLDNVTDHLPPAVDPMRLELNLSKRRVTVYQHDQAVKSYPVAI
GRAGWATPAGDFEVKTKYRNPPWLHPFKGYVIPGGDPENPLGRRWMGFWTDGNNWIGFHGTPNRDSVGRSASHGCVRMYD
EDIEEMYELVAVGTPVKVIR
>Mature_180_residues
MRHSSIKLIALSVVAGALALGQPVRAVEEIAIAPPLPGLDNVTDHLPPAVDPMRLELNLSKRRVTVYQHDQAVKSYPVAI
GRAGWATPAGDFEVKTKYRNPPWLHPFKGYVIPGGDPENPLGRRWMGFWTDGNNWIGFHGTPNRDSVGRSASHGCVRMYD
EDIEEMYELVAVGTPVKVIR

Specific function: Probable enzyme that may play an important role in cell wall biology [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Spore wall. Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=137, Percent_Identity=37.956204379562, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 19888; Mature: 19888

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHSSIKLIALSVVAGALALGQPVRAVEEIAIAPPLPGLDNVTDHLPPAVDPMRLELNLS
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEEEECC
KRRVTVYQHDQAVKSYPVAIGRAGWATPAGDFEVKTKYRNPPWLHPFKGYVIPGGDPENP
CCEEEEEECCCHHHHCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCC
LGRRWMGFWTDGNNWIGFHGTPNRDSVGRSASHGCVRMYDEDIEEMYELVAVGTPVKVIR
CCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEECC
>Mature Secondary Structure
MRHSSIKLIALSVVAGALALGQPVRAVEEIAIAPPLPGLDNVTDHLPPAVDPMRLELNLS
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEEEECC
KRRVTVYQHDQAVKSYPVAIGRAGWATPAGDFEVKTKYRNPPWLHPFKGYVIPGGDPENP
CCEEEEEECCCHHHHCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCC
LGRRWMGFWTDGNNWIGFHGTPNRDSVGRSASHGCVRMYDEDIEEMYELVAVGTPVKVIR
CCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA