| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158334329
Identifier: 158334329
GI number: 158334329
Start: 1116062
End: 1116943
Strand: Reverse
Name: 158334329
Synonym: AM1_1149
Alternate gene names: NA
Gene position: 1116943-1116062 (Counterclockwise)
Preceding gene: 158334330
Following gene: 158334328
Centisome position: 17.17
GC content: 29.59
Gene sequence:
>882_bases ATGTCAAGCCAAAATAGTTTTTTGAACATTACTCAGCAAGGTAAGAATGGATGGTTGCGTTATTTGCTTGGCATAATAAC GATTTTTGGGATAGTTCTATTGAGTCTCCTAGCTTATGGATATATCATCTATTATTTTTTTGATATGCCAATTAAAGAAT TATTTTTGCTATCAGAAAAAGATCCTATCCTTCTTCTATTTATTTTTACTTTATATTCGTTTAGTTTAGTTACTGGTATT TACATCGCGATAGAAAAAATTCACAAGAGAAAATTCAAGACTTTATTTAGTCCAAGAGGAACTATTGACTGGCTTCGAAT AGTTAGAGGTTCAGTGCTATGGCTCAGTACATACTTTGCAACTTGGATTTTATTATATATAATTAATCCTACCCGTTATC AACTAGTATTTAATATCTCTGAATGGATTCCATTAGCTTTTATTTATCTTATATCGTCTATACTTGGCTCGTTTGTAAAA ATTCTTTTTCTGTATAGTTATCTACTTCAAGGAATATACAGTTTTATTCGAAATCGTGGTCTTACCGCAATCATTTTAAG TACTGTAATTACGACACTTTCAATTGACTTGGAGTACCCTGAGTATTGGATCACTAATTTTATTTTTGCTCTATTTTTTA CTTTGATAATAATCAAAGATAATAGGATCGAATTAGCTATTGGAATGAATATTTCAAATCTTTTTCTCCATAATTCTTTC TTGGCTCCGTTGAAGAGTAACTTTGTTTTTTCAGCAGTATTTAAGGCTAATGGAGCATCAAATATATTCTTTTATTTCAT AGTCTGTATAATTAGATTCTCTTTATTTTATTTTTTAAGTTTCCATGTTTCCAAGAAACGAGGCTTACCAAACGTTAATT GA
Upstream 100 bases:
>100_bases GGGTGTTAACTTGTGGAGATAGAACCCCGGTAAATCTAGCATTAAACTAGAATTCAGAGATATTTATTTCTTATGGAAGA CTTAATTAAGTGAATTAGAT
Downstream 100 bases:
>100_bases TTAATAAAATGTAGATTTAGCTTTTTTACCCAGCAGGTTTACTTAGGAACAATCTTTTAGATATTCAGGTGTCAAATTCC CATTCAATACCAGTTTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSSQNSFLNITQQGKNGWLRYLLGIITIFGIVLLSLLAYGYIIYYFFDMPIKELFLLSEKDPILLLFIFTLYSFSLVTGI YIAIEKIHKRKFKTLFSPRGTIDWLRIVRGSVLWLSTYFATWILLYIINPTRYQLVFNISEWIPLAFIYLISSILGSFVK ILFLYSYLLQGIYSFIRNRGLTAIILSTVITTLSIDLEYPEYWITNFIFALFFTLIIIKDNRIELAIGMNISNLFLHNSF LAPLKSNFVFSAVFKANGASNIFFYFIVCIIRFSLFYFLSFHVSKKRGLPNVN
Sequences:
>Translated_293_residues MSSQNSFLNITQQGKNGWLRYLLGIITIFGIVLLSLLAYGYIIYYFFDMPIKELFLLSEKDPILLLFIFTLYSFSLVTGI YIAIEKIHKRKFKTLFSPRGTIDWLRIVRGSVLWLSTYFATWILLYIINPTRYQLVFNISEWIPLAFIYLISSILGSFVK ILFLYSYLLQGIYSFIRNRGLTAIILSTVITTLSIDLEYPEYWITNFIFALFFTLIIIKDNRIELAIGMNISNLFLHNSF LAPLKSNFVFSAVFKANGASNIFFYFIVCIIRFSLFYFLSFHVSKKRGLPNVN >Mature_292_residues SSQNSFLNITQQGKNGWLRYLLGIITIFGIVLLSLLAYGYIIYYFFDMPIKELFLLSEKDPILLLFIFTLYSFSLVTGIY IAIEKIHKRKFKTLFSPRGTIDWLRIVRGSVLWLSTYFATWILLYIINPTRYQLVFNISEWIPLAFIYLISSILGSFVKI LFLYSYLLQGIYSFIRNRGLTAIILSTVITTLSIDLEYPEYWITNFIFALFFTLIIIKDNRIELAIGMNISNLFLHNSFL APLKSNFVFSAVFKANGASNIFFYFIVCIIRFSLFYFLSFHVSKKRGLPNVN
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34193; Mature: 34062
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQNSFLNITQQGKNGWLRYLLGIITIFGIVLLSLLAYGYIIYYFFDMPIKELFLLSEK CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC DPILLLFIFTLYSFSLVTGIYIAIEKIHKRKFKTLFSPRGTIDWLRIVRGSVLWLSTYFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH TWILLYIINPTRYQLVFNISEWIPLAFIYLISSILGSFVKILFLYSYLLQGIYSFIRNRG HHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LTAIILSTVITTLSIDLEYPEYWITNFIFALFFTLIIIKDNRIELAIGMNISNLFLHNSF HHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHH LAPLKSNFVFSAVFKANGASNIFFYFIVCIIRFSLFYFLSFHVSKKRGLPNVN HHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SSQNSFLNITQQGKNGWLRYLLGIITIFGIVLLSLLAYGYIIYYFFDMPIKELFLLSEK CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC DPILLLFIFTLYSFSLVTGIYIAIEKIHKRKFKTLFSPRGTIDWLRIVRGSVLWLSTYFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH TWILLYIINPTRYQLVFNISEWIPLAFIYLISSILGSFVKILFLYSYLLQGIYSFIRNRG HHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LTAIILSTVITTLSIDLEYPEYWITNFIFALFFTLIIIKDNRIELAIGMNISNLFLHNSF HHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHH LAPLKSNFVFSAVFKANGASNIFFYFIVCIIRFSLFYFLSFHVSKKRGLPNVN HHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA