| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is tap [C]
Identifier: 158334285
GI number: 158334285
Start: 1080104
End: 1082194
Strand: Reverse
Name: tap [C]
Synonym: AM1_1104
Alternate gene names: 158334285
Gene position: 1082194-1080104 (Counterclockwise)
Preceding gene: 158334286
Following gene: 158334284
Centisome position: 16.64
GC content: 48.06
Gene sequence:
>2091_bases ATGAATTCTGATCAACTTCAGTCCGGCACATTGGATCAAGTCTTACCGATCGATTCTTCTCCTTCTCTTATACACCACGT TCAACAGTTTGTCAGAAAAAACTTGGTGGCAACTCTCTCAGCAACGATTGCCACGAGTCTAATTGTTACTGCAGGCTGTG GGGTCAGTATCTGGAACAGTTCCCGCAATCTAGAACAGATAGTTGAGCGCGAACTTAAGCTGCAAAAAAATACTGGGGAA ATTGCCCTTTACGATGAAGTGCTAACCATGTCTGCACGAATGGCTGCTAGCACCGGCGATTTGAAATGGCTACAACGGTA TGAGCGATATGTTCCTTTATTGGACAAAGCGATTGCCCAAACCCTTGGCAATGTTCCCGAGGAAATCAGGATTGAAGCGA GTAAGACGGATAAAGCCAATAAAAGACTAATCGAGCTGGAAGAACAGGCGTTTGGCTTGGTTAAAGCAAACAAGGCTGAA GAAGCTCAAACGATCTTGGAGGGGGATGAATACGGGCTGCTTAAGGCTCAATATTCGGAAGGCAATCGACAGGTTACTCA GCTCATTGAGTACTTTATCGACGAGCAGCTTGAGGCGTATCAAAGCCAGCTCCAAGCATCTATTGGCTTTGCGGGTTTAG TGGCTTTACCCATCCTATTAGCCAGTTGGATTTTGGTCTTAACTGCCGTCCGCGACTATGTCCGCGACAGACAAGAATTC CAGGATAAGGTGAATCAATCCCAGCTAGAACAATTGGTTTTGAATAGTCAACTTCAGGAAGAAATTGAGTCTCGGAAACA ACAAGAAGAAGAGGCTCGCCAAGATAATGACCAGCTGCAGGGAGATATTCTTGAGCTGCTGGATGTGGTTGCCAATATTG AGGAAGGAGATTTTACAACCCAAGCAACGGTGAATGATCGAGCCACGGGTTTAATTGCAGATACGCTCAATCGCTTAATT GAAGAATTGGGCAATATTCTCAAACAAGTATCAGCAACGTCGCGTCAAGTTTCGGCGAGCAGTACCCGCCAAAAAGATAT TACAGAGGTTGTAGCTCGAAACACCGATCAGCAATCACAAGAAGTTATGCAGGTTTTGGGCTTGATCAATAACGTCCGCT CTTTTGCAACCAACGCAGCCCAGCAACTTGCAACGACCAACCAATCCTTGGTGACCCTCAATACGGCTGTGGCCCAGGGT CAAGTTGAGATCGGTTCGTTGAGAGAAGAAATCGAAGTGCTGCAACAGGGTAGCGATCGCATCGTGCAGCAGATGAAAAC TCTAGGAGAATTCGTGGGTTTGACAGATCAGTTTGTGCAGGACCAGGGGGACATTGCTGAACAAACACAGATGTTGGCGT TGAATGCAGCGTTGGTAGCAGCAAGAGCCTCCGAACAATCCGATCCGAAAAAGTTTGCCCAGGTGGCGCAAGAATTTGAA TCGATTGCTAACCAGGTGAGTCAATTGGCTCAACAAACCAACGACGGTCTCGGTTCTCTAGAACAACGGAGCGCTCAGAT TCACCGGGTTGTGACCGATGTAGACGCCGATGTGCAACGACTAGGCGGCGTGGTGGATGACTTTACCCAAGGGGTTCGAC ATACCCAATCCGTGTTCCAAAAGGTACAAGATGTGACCGGACAAGCGGTGGCATCTGGTGAGACCGTAGCCAAGACCAGT GAAGACATTGTTCAAACCTCAGAGCAAACGGCCATGACGATGGAGGCCATTGCCCAACTCTCGGCCCAAATTGCAGGTCA GTCGGACGATGCGCAACAGTTAGCAGACACCATGAATCAGCTTTCTGATGACTTGTTAGGGAAAGTCAAAGTCTTCACTT TGCCCGAAGAAGATTTCACCCTACTCCAAACGGCTCCCTCTGAACAACTCGAGAAATTGAATGCTGATTCACAATCCGAA GGATCCTTGTCTGCTGAGCCATCCGACGAGTTAATTCCTGCCGAAGAATCCGAGGAACTCACGCCTGCTGCGGAATCCGA AGAATCCACGCTTGCGAAACACTCTGAAGACTCTGCTTCTGCTGAAGAATCTGAGGAATCCGCATCATCTGAGTCAGCAC TTGCTGTCTAG
Upstream 100 bases:
>100_bases GCAGCATAGCCCCCGATTTTCTCCAATCCCTTCTACATCCTAAAGACAGCTTGTGATGTCTTATTGATGGCCTTTTACTT ACTGTAAACAGCTTGCGCTT
Downstream 100 bases:
>100_bases ATTCACATCATTCATTCCCAATTATTTGGTCCACTGACACTAGGTACACATGATGACTACTGGCCCATCCCTCTCTCCCC TATCTGAAGATGCTCCTATC
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 696; Mature: 696
Protein sequence:
>696_residues MNSDQLQSGTLDQVLPIDSSPSLIHHVQQFVRKNLVATLSATIATSLIVTAGCGVSIWNSSRNLEQIVERELKLQKNTGE IALYDEVLTMSARMAASTGDLKWLQRYERYVPLLDKAIAQTLGNVPEEIRIEASKTDKANKRLIELEEQAFGLVKANKAE EAQTILEGDEYGLLKAQYSEGNRQVTQLIEYFIDEQLEAYQSQLQASIGFAGLVALPILLASWILVLTAVRDYVRDRQEF QDKVNQSQLEQLVLNSQLQEEIESRKQQEEEARQDNDQLQGDILELLDVVANIEEGDFTTQATVNDRATGLIADTLNRLI EELGNILKQVSATSRQVSASSTRQKDITEVVARNTDQQSQEVMQVLGLINNVRSFATNAAQQLATTNQSLVTLNTAVAQG QVEIGSLREEIEVLQQGSDRIVQQMKTLGEFVGLTDQFVQDQGDIAEQTQMLALNAALVAARASEQSDPKKFAQVAQEFE SIANQVSQLAQQTNDGLGSLEQRSAQIHRVVTDVDADVQRLGGVVDDFTQGVRHTQSVFQKVQDVTGQAVASGETVAKTS EDIVQTSEQTAMTMEAIAQLSAQIAGQSDDAQQLADTMNQLSDDLLGKVKVFTLPEEDFTLLQTAPSEQLEKLNADSQSE GSLSAEPSDELIPAEESEELTPAAESEESTLAKHSEDSASAEESEESASSESALAV
Sequences:
>Translated_696_residues MNSDQLQSGTLDQVLPIDSSPSLIHHVQQFVRKNLVATLSATIATSLIVTAGCGVSIWNSSRNLEQIVERELKLQKNTGE IALYDEVLTMSARMAASTGDLKWLQRYERYVPLLDKAIAQTLGNVPEEIRIEASKTDKANKRLIELEEQAFGLVKANKAE EAQTILEGDEYGLLKAQYSEGNRQVTQLIEYFIDEQLEAYQSQLQASIGFAGLVALPILLASWILVLTAVRDYVRDRQEF QDKVNQSQLEQLVLNSQLQEEIESRKQQEEEARQDNDQLQGDILELLDVVANIEEGDFTTQATVNDRATGLIADTLNRLI EELGNILKQVSATSRQVSASSTRQKDITEVVARNTDQQSQEVMQVLGLINNVRSFATNAAQQLATTNQSLVTLNTAVAQG QVEIGSLREEIEVLQQGSDRIVQQMKTLGEFVGLTDQFVQDQGDIAEQTQMLALNAALVAARASEQSDPKKFAQVAQEFE SIANQVSQLAQQTNDGLGSLEQRSAQIHRVVTDVDADVQRLGGVVDDFTQGVRHTQSVFQKVQDVTGQAVASGETVAKTS EDIVQTSEQTAMTMEAIAQLSAQIAGQSDDAQQLADTMNQLSDDLLGKVKVFTLPEEDFTLLQTAPSEQLEKLNADSQSE GSLSAEPSDELIPAEESEELTPAAESEESTLAKHSEDSASAEESEESASSESALAV >Mature_696_residues MNSDQLQSGTLDQVLPIDSSPSLIHHVQQFVRKNLVATLSATIATSLIVTAGCGVSIWNSSRNLEQIVERELKLQKNTGE IALYDEVLTMSARMAASTGDLKWLQRYERYVPLLDKAIAQTLGNVPEEIRIEASKTDKANKRLIELEEQAFGLVKANKAE EAQTILEGDEYGLLKAQYSEGNRQVTQLIEYFIDEQLEAYQSQLQASIGFAGLVALPILLASWILVLTAVRDYVRDRQEF QDKVNQSQLEQLVLNSQLQEEIESRKQQEEEARQDNDQLQGDILELLDVVANIEEGDFTTQATVNDRATGLIADTLNRLI EELGNILKQVSATSRQVSASSTRQKDITEVVARNTDQQSQEVMQVLGLINNVRSFATNAAQQLATTNQSLVTLNTAVAQG QVEIGSLREEIEVLQQGSDRIVQQMKTLGEFVGLTDQFVQDQGDIAEQTQMLALNAALVAARASEQSDPKKFAQVAQEFE SIANQVSQLAQQTNDGLGSLEQRSAQIHRVVTDVDADVQRLGGVVDDFTQGVRHTQSVFQKVQDVTGQAVASGETVAKTS EDIVQTSEQTAMTMEAIAQLSAQIAGQSDDAQQLADTMNQLSDDLLGKVKVFTLPEEDFTLLQTAPSEQLEKLNADSQSE GSLSAEPSDELIPAEESEELTPAAESEESTLAKHSEDSASAEESEESASSESALAV
Specific function: Mediates Taxis Toward Dipeptides VIa An Interaction With The Periplasmic Dipeptide-Binding Protein. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Transduce A Signal From The Outsid
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003018 - InterPro: IPR003660 - InterPro: IPR016132 [H]
Pfam domain/function: PF01590 GAF; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 76144; Mature: 76144
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSDQLQSGTLDQVLPIDSSPSLIHHVQQFVRKNLVATLSATIATSLIVTAGCGVSIWNS CCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC SRNLEQIVERELKLQKNTGEIALYDEVLTMSARMAASTGDLKWLQRYERYVPLLDKAIAQ CCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH TLGNVPEEIRIEASKTDKANKRLIELEEQAFGLVKANKAEEAQTILEGDEYGLLKAQYSE HHCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEHHCC GNRQVTQLIEYFIDEQLEAYQSQLQASIGFAGLVALPILLASWILVLTAVRDYVRDRQEF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDKVNQSQLEQLVLNSQLQEEIESRKQQEEEARQDNDQLQGDILELLDVVANIEEGDFTT HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE QATVNDRATGLIADTLNRLIEELGNILKQVSATSRQVSASSTRQKDITEVVARNTDQQSQ EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH EVMQVLGLINNVRSFATNAAQQLATTNQSLVTLNTAVAQGQVEIGSLREEIEVLQQGSDR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHCCHHH IVQQMKTLGEFVGLTDQFVQDQGDIAEQTQMLALNAALVAARASEQSDPKKFAQVAQEFE HHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SIANQVSQLAQQTNDGLGSLEQRSAQIHRVVTDVDADVQRLGGVVDDFTQGVRHTQSVFQ HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KVQDVTGQAVASGETVAKTSEDIVQTSEQTAMTMEAIAQLSAQIAGQSDDAQQLADTMNQ HHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LSDDLLGKVKVFTLPEEDFTLLQTAPSEQLEKLNADSQSEGSLSAEPSDELIPAEESEEL HHHHHHCCEEEEECCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPAAESEESTLAKHSEDSASAEESEESASSESALAV CCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure MNSDQLQSGTLDQVLPIDSSPSLIHHVQQFVRKNLVATLSATIATSLIVTAGCGVSIWNS CCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC SRNLEQIVERELKLQKNTGEIALYDEVLTMSARMAASTGDLKWLQRYERYVPLLDKAIAQ CCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH TLGNVPEEIRIEASKTDKANKRLIELEEQAFGLVKANKAEEAQTILEGDEYGLLKAQYSE HHCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEHHCC GNRQVTQLIEYFIDEQLEAYQSQLQASIGFAGLVALPILLASWILVLTAVRDYVRDRQEF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDKVNQSQLEQLVLNSQLQEEIESRKQQEEEARQDNDQLQGDILELLDVVANIEEGDFTT HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE QATVNDRATGLIADTLNRLIEELGNILKQVSATSRQVSASSTRQKDITEVVARNTDQQSQ EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH EVMQVLGLINNVRSFATNAAQQLATTNQSLVTLNTAVAQGQVEIGSLREEIEVLQQGSDR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHCCHHH IVQQMKTLGEFVGLTDQFVQDQGDIAEQTQMLALNAALVAARASEQSDPKKFAQVAQEFE HHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SIANQVSQLAQQTNDGLGSLEQRSAQIHRVVTDVDADVQRLGGVVDDFTQGVRHTQSVFQ HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KVQDVTGQAVASGETVAKTSEDIVQTSEQTAMTMEAIAQLSAQIAGQSDDAQQLADTMNQ HHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LSDDLLGKVKVFTLPEEDFTLLQTAPSEQLEKLNADSQSEGSLSAEPSDELIPAEESEEL HHHHHHCCEEEEECCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPAAESEESTLAKHSEDSASAEESEESASSESALAV CCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]