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The map label for this gene is ychE [H]

Identifier: 158334269

GI number: 158334269

Start: 1059332

End: 1059982

Strand: Reverse

Name: ychE [H]

Synonym: AM1_1088

Alternate gene names: 158334269

Gene position: 1059982-1059332 (Counterclockwise)

Preceding gene: 158334270

Following gene: 158334268

Centisome position: 16.3

GC content: 46.7

Gene sequence:

>651_bases
GTGTTTGACTTGCCAGAATATCTGAAATTAGTGGCGGGTCTCGCATCAATCGTTAATCCTGTGGGTGTCATCCCTATTTT
CCTAAGCTTGACAGAGGGGCAAGGCTCTAGCCAAAGGCGTCTTATTGCCTTTCAATCCTCAATTGCTTTAAGTATTGTTC
TGTTAGTGGCTCTTGTCGCCGGAGAAGCCATTCTCAGCTTTTTTAGCATTAGCCTACCGTCCTTCCGAGTCGCAGGAGGC
TTATTAATACTGCTAACAGCATTATCCATGTTACGGGCAGAAACCATCGAATCACGCCAACTCACAGAAACAGGTACCGT
CGATCCGAATGAACCACCGACATTACCGGATGCTCCTGTTGCCGTTGTCCCCATTGCCATTCCTCTACTCGGCGGCCCTG
GTGCCATCAGTACCGTCATTGTTTATGCGCATACCCAGGAATCTATAGAACATACCATTCTCGTTGGTTTAGCAATTCTG
AGTGTCTCTGTAATTGCCTTGGTGGGATTACTCATTGCCCCTCTAATGGATACTGTGATGGGTAAAACAGGTATGAATGT
GATTAGTCGGGTCATGGGATTAATCATCACCGCTATTTCCATCGAGTTCATTGCCGATGGTGTCAAAGAACTCCTACCTG
GATTAGGCTAA

Upstream 100 bases:

>100_bases
GATTGAACTATACGTCCTAGGAGAGAATCGGGTTGCGATCGCAACTCGCACCGTAGATTTACCTTAATCCACAGAACCGT
TAGCGAGGACTATCCATATT

Downstream 100 bases:

>100_bases
CAAGAGTGAGTATCGATTCCTAAAGCTTTCAAGTGCACCTGCATCAAAGCATTGGCCATTACTAGCTGATCTGCAAAAAT
CAAAATTTTTTATCTGATTG

Product: multiple antibiotic resistance (MarC)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MFDLPEYLKLVAGLASIVNPVGVIPIFLSLTEGQGSSQRRLIAFQSSIALSIVLLVALVAGEAILSFFSISLPSFRVAGG
LLILLTALSMLRAETIESRQLTETGTVDPNEPPTLPDAPVAVVPIAIPLLGGPGAISTVIVYAHTQESIEHTILVGLAIL
SVSVIALVGLLIAPLMDTVMGKTGMNVISRVMGLIITAISIEFIADGVKELLPGLG

Sequences:

>Translated_216_residues
MFDLPEYLKLVAGLASIVNPVGVIPIFLSLTEGQGSSQRRLIAFQSSIALSIVLLVALVAGEAILSFFSISLPSFRVAGG
LLILLTALSMLRAETIESRQLTETGTVDPNEPPTLPDAPVAVVPIAIPLLGGPGAISTVIVYAHTQESIEHTILVGLAIL
SVSVIALVGLLIAPLMDTVMGKTGMNVISRVMGLIITAISIEFIADGVKELLPGLG
>Mature_216_residues
MFDLPEYLKLVAGLASIVNPVGVIPIFLSLTEGQGSSQRRLIAFQSSIALSIVLLVALVAGEAILSFFSISLPSFRVAGG
LLILLTALSMLRAETIESRQLTETGTVDPNEPPTLPDAPVAVVPIAIPLLGGPGAISTVIVYAHTQESIEHTILVGLAIL
SVSVIALVGLLIAPLMDTVMGKTGMNVISRVMGLIITAISIEFIADGVKELLPGLG

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=217, Percent_Identity=37.7880184331797, Blast_Score=158, Evalue=3e-40,
Organism=Escherichia coli, GI1787809, Length=202, Percent_Identity=29.7029702970297, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI1789842, Length=199, Percent_Identity=29.1457286432161, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22428; Mature: 22428

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDLPEYLKLVAGLASIVNPVGVIPIFLSLTEGQGSSQRRLIAFQSSIALSIVLLVALVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GEAILSFFSISLPSFRVAGGLLILLTALSMLRAETIESRQLTETGTVDPNEPPTLPDAPV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
AVVPIAIPLLGGPGAISTVIVYAHTQESIEHTILVGLAILSVSVIALVGLLIAPLMDTVM
HHHHHHHHHCCCCCHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKTGMNVISRVMGLIITAISIEFIADGVKELLPGLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFDLPEYLKLVAGLASIVNPVGVIPIFLSLTEGQGSSQRRLIAFQSSIALSIVLLVALVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GEAILSFFSISLPSFRVAGGLLILLTALSMLRAETIESRQLTETGTVDPNEPPTLPDAPV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
AVVPIAIPLLGGPGAISTVIVYAHTQESIEHTILVGLAILSVSVIALVGLLIAPLMDTVM
HHHHHHHHHCCCCCHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKTGMNVISRVMGLIITAISIEFIADGVKELLPGLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]