Click here to switch to the map view.

The map label for this gene is yceA [C]

Identifier: 158334256

GI number: 158334256

Start: 1044484

End: 1045416

Strand: Reverse

Name: yceA [C]

Synonym: AM1_1075

Alternate gene names: 158334256

Gene position: 1045416-1044484 (Counterclockwise)

Preceding gene: 158334258

Following gene: 158334255

Centisome position: 16.07

GC content: 48.87

Gene sequence:

>933_bases
ATGTCTGAATTTTTAACGGTTGCCTTCTATAAATTCGTTGAGCTGCAAGATTATGCGGAGTTGAAGGCCCCTCTTTTAGC
ATGCTGCCAAGATAATGACGTTCAAGGCACGATTCTCTTAGCGACAGAAGGAATCAATGGTGCGATCGCAGGTCTCCCCC
ACAACATTCACACGGTCCTAGATTTTCTGTGTGGAGATCCACGATTTGCAGATTTAGCACCGAAGGAATCCTGGTCGGAG
AAACGGCCCTTTTATCGCATGAAGGTCCGACTGAAAAAAGAAATCATCAAAATGGGGGTGCCAGACATTGATCCCACCCA
AACCGTTGGGGAATACGTGAAGCCAGAAGACTGGAATCAGCTACTCGCCGATCCAGATGTGGTGGTTATTGATGTACGCA
ACGACTATGAAGTAGCCATTGGCACGTTTAAAGGCGCTATCAATCCCAACACTAAAAGTTTTTCAGAGTTGCCTGAATGG
CTACAGGAACAGGCTGAATTGCAGAAGAAGCCGAAAGTTGCCATGTTCTGTACGGGCGGCATTCGCTGTGAGAAATCAAC
TGCTTTATTGCGGCATGAAGGATTTGAAGACGTTTTTCACCTGCAGGGGGGCATTCTCAGCTACCTAGAGAAAGTGCCAG
AAGATGAAAGTCTGTGGCAAGGGGATTGTTTTGTCTTTGATGAACGGGTTGCCGTCGGCCATGGCCTTAAGCCGGGACGA
TATCAGCTATGTCGAGCCTGTCGCACGCCCATTAGTCCCGAGGATATGAAGTCGGAGCACTATGTGCCTGGCCAAAGTTG
TCCCCACTGCTATGGCACCAAAACCGAAGAGCAACAACAACGATTTGCTGAACGTCAGCGGCAGATCGAGCTGGCTAAGC
AACGAAATCAAGTCCACATCGGGGCGAAATATTCCCGTCATCAACCCGGCTAA

Upstream 100 bases:

>100_bases
TGTATGGGGATGTCCTAACATAGGAAACAGCTTGACGCATTAAACCTTCAGGGTGAAGGGTTTTGCCTCGCTTATTCCTC
GATATTTTCAATTAACATTA

Downstream 100 bases:

>100_bases
TTTCCATGGCAACCTATCCTATCTTGTATTCCTTTCGCCGCTGTCCCTATGCCATGCGGGCGCGATTGGCTTTAACCGTT
AGCCAACAGATCTGTGAACT

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSEFLTVAFYKFVELQDYAELKAPLLACCQDNDVQGTILLATEGINGAIAGLPHNIHTVLDFLCGDPRFADLAPKESWSE
KRPFYRMKVRLKKEIIKMGVPDIDPTQTVGEYVKPEDWNQLLADPDVVVIDVRNDYEVAIGTFKGAINPNTKSFSELPEW
LQEQAELQKKPKVAMFCTGGIRCEKSTALLRHEGFEDVFHLQGGILSYLEKVPEDESLWQGDCFVFDERVAVGHGLKPGR
YQLCRACRTPISPEDMKSEHYVPGQSCPHCYGTKTEEQQQRFAERQRQIELAKQRNQVHIGAKYSRHQPG

Sequences:

>Translated_310_residues
MSEFLTVAFYKFVELQDYAELKAPLLACCQDNDVQGTILLATEGINGAIAGLPHNIHTVLDFLCGDPRFADLAPKESWSE
KRPFYRMKVRLKKEIIKMGVPDIDPTQTVGEYVKPEDWNQLLADPDVVVIDVRNDYEVAIGTFKGAINPNTKSFSELPEW
LQEQAELQKKPKVAMFCTGGIRCEKSTALLRHEGFEDVFHLQGGILSYLEKVPEDESLWQGDCFVFDERVAVGHGLKPGR
YQLCRACRTPISPEDMKSEHYVPGQSCPHCYGTKTEEQQQRFAERQRQIELAKQRNQVHIGAKYSRHQPG
>Mature_309_residues
SEFLTVAFYKFVELQDYAELKAPLLACCQDNDVQGTILLATEGINGAIAGLPHNIHTVLDFLCGDPRFADLAPKESWSEK
RPFYRMKVRLKKEIIKMGVPDIDPTQTVGEYVKPEDWNQLLADPDVVVIDVRNDYEVAIGTFKGAINPNTKSFSELPEWL
QEQAELQKKPKVAMFCTGGIRCEKSTALLRHEGFEDVFHLQGGILSYLEKVPEDESLWQGDCFVFDERVAVGHGLKPGRY
QLCRACRTPISPEDMKSEHYVPGQSCPHCYGTKTEEQQQRFAERQRQIELAKQRNQVHIGAKYSRHQPG

Specific function: Unknown. [C]

COG id: COG1054

COG function: function code R; Predicted sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain

Homologues:

Organism=Homo sapiens, GI111038120, Length=271, Percent_Identity=30.2583025830258, Blast_Score=128, Evalue=8e-30,
Organism=Escherichia coli, GI1787294, Length=252, Percent_Identity=33.3333333333333, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1075_ACAM1 (B0C1U8)

Other databases:

- EMBL:   CP000828
- RefSeq:   YP_001515428.1
- ProteinModelPortal:   B0C1U8
- GeneID:   5679900
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_1075
- HOGENOM:   HBG366219
- OMA:   ARNDYEY
- ProtClustDB:   CLSK951359
- BioCyc:   AMAR329726:AM1_1075-MONOMER
- HAMAP:   MF_00469
- InterPro:   IPR001763
- InterPro:   IPR020936
- Gene3D:   G3DSA:3.40.250.10
- SMART:   SM00450

Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like

EC number: NA

Molecular weight: Translated: 35203; Mature: 35072

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS50206 RHODANESE_3

Important sites: ACT_SITE 177-177

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFLTVAFYKFVELQDYAELKAPLLACCQDNDVQGTILLATEGINGAIAGLPHNIHTVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEECCCCHHHHHH
DFLCGDPRFADLAPKESWSEKRPFYRMKVRLKKEIIKMGVPDIDPTQTVGEYVKPEDWNQ
HHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHH
LLADPDVVVIDVRNDYEVAIGTFKGAINPNTKSFSELPEWLQEQAELQKKPKVAMFCTGG
HHCCCCEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCC
IRCEKSTALLRHEGFEDVFHLQGGILSYLEKVPEDESLWQGDCFVFDERVAVGHGLKPGR
EEECHHHHHHHHCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEECHHHHCCCCCCCH
YQLCRACRTPISPEDMKSEHYVPGQSCPHCYGTKTEEQQQRFAERQRQIELAKQRNQVHI
HHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEE
GAKYSRHQPG
CCCCCCCCCC
>Mature Secondary Structure 
SEFLTVAFYKFVELQDYAELKAPLLACCQDNDVQGTILLATEGINGAIAGLPHNIHTVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEECCCCHHHHHH
DFLCGDPRFADLAPKESWSEKRPFYRMKVRLKKEIIKMGVPDIDPTQTVGEYVKPEDWNQ
HHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHH
LLADPDVVVIDVRNDYEVAIGTFKGAINPNTKSFSELPEWLQEQAELQKKPKVAMFCTGG
HHCCCCEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCC
IRCEKSTALLRHEGFEDVFHLQGGILSYLEKVPEDESLWQGDCFVFDERVAVGHGLKPGR
EEECHHHHHHHHCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEECHHHHCCCCCCCH
YQLCRACRTPISPEDMKSEHYVPGQSCPHCYGTKTEEQQQRFAERQRQIELAKQRNQVHI
HHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEE
GAKYSRHQPG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA