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The map label for this gene is yqjB [H]

Identifier: 158334241

GI number: 158334241

Start: 1027754

End: 1028359

Strand: Reverse

Name: yqjB [H]

Synonym: AM1_1058

Alternate gene names: 158334241

Gene position: 1028359-1027754 (Counterclockwise)

Preceding gene: 158334243

Following gene: 158334239

Centisome position: 15.81

GC content: 47.85

Gene sequence:

>606_bases
TTGGGGAACTATTGTTTTAACGTCTCTAATGCATCTTCTGCTGTTTTAATTTCTCCCATGAAAACTGAATTTATTAAAAT
TGCCTGTGTAGTAATTTCTGTCGGCACAATAGCTTCATTTGATGTCGCTCAAGCAGCAGAACAAAATATTCCTGAAACAC
CTTTGCCAGGTTTGGATCAACCTCGAAATTATTTGCCAAGTGCCCATGGGACTCGCCGATTAGAACTCAGCATTAGTCGT
CGCCAGGTGACCCTATTTCAGGGGGATCAGGTCCTAAAATCCTATCCGGTAGCGGTAGGAAAAGCCGGATGGCCCACCCC
TGTCGGAGATTTCGAAGTTCAAACAAAAGTTCGTAATCCCTCCTGGCAAAACCCTTTTCAGGGTAAAGGCTACGTCATTC
CAGGGGGTGCTCCCGATAATCCCCTCAGTACCCGTTGGTTAGGATTTTGGACCAATGGCAAAAACTGGATCGGGTTTCAT
GGCACCCCTAATCGGGCTTCCGTCGGCTCCGCCGCGTCTCACGGTTGTGTGCGCATGTATGACGAACATATTCAGGAGCT
GTTTGAATTGGTAGCGGTGGGGACTCCCGTTAAGGTGACTCGTTAG

Upstream 100 bases:

>100_bases
AAAAAAAGGAATAAAGTAGAACCTCTTTGATTGAATTATATTCACAAACAAAATAAATATTGCTCTTCAAATTTTCATGA
GCTAGATTTGAGGCAGATAT

Downstream 100 bases:

>100_bases
ACCATAGGTCTGTAACGTCATAACCTAGCTCTGTTATCATTTGCCGCAGTAACGGCAGACTTAGACCAATCACATTGCTA
TGGCAACCTCTGATCTGCTC

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MGNYCFNVSNASSAVLISPMKTEFIKIACVVISVGTIASFDVAQAAEQNIPETPLPGLDQPRNYLPSAHGTRRLELSISR
RQVTLFQGDQVLKSYPVAVGKAGWPTPVGDFEVQTKVRNPSWQNPFQGKGYVIPGGAPDNPLSTRWLGFWTNGKNWIGFH
GTPNRASVGSAASHGCVRMYDEHIQELFELVAVGTPVKVTR

Sequences:

>Translated_201_residues
MGNYCFNVSNASSAVLISPMKTEFIKIACVVISVGTIASFDVAQAAEQNIPETPLPGLDQPRNYLPSAHGTRRLELSISR
RQVTLFQGDQVLKSYPVAVGKAGWPTPVGDFEVQTKVRNPSWQNPFQGKGYVIPGGAPDNPLSTRWLGFWTNGKNWIGFH
GTPNRASVGSAASHGCVRMYDEHIQELFELVAVGTPVKVTR
>Mature_200_residues
GNYCFNVSNASSAVLISPMKTEFIKIACVVISVGTIASFDVAQAAEQNIPETPLPGLDQPRNYLPSAHGTRRLELSISRR
QVTLFQGDQVLKSYPVAVGKAGWPTPVGDFEVQTKVRNPSWQNPFQGKGYVIPGGAPDNPLSTRWLGFWTNGKNWIGFHG
TPNRASVGSAASHGCVRMYDEHIQELFELVAVGTPVKVTR

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=123, Percent_Identity=37.3983739837398, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 21884; Mature: 21753

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNYCFNVSNASSAVLISPMKTEFIKIACVVISVGTIASFDVAQAAEQNIPETPLPGLDQ
CCCEEEEECCCCCEEEEECCHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCC
PRNYLPSAHGTRRLELSISRRQVTLFQGDQVLKSYPVAVGKAGWPTPVGDFEVQTKVRNP
CHHHCCCCCCCEEEEEEEECEEEEEEECCHHHHHCCCEECCCCCCCCCCCEEEEEEECCC
SWQNPFQGKGYVIPGGAPDNPLSTRWLGFWTNGKNWIGFHGTPNRASVGSAASHGCVRMY
CCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHH
DEHIQELFELVAVGTPVKVTR
HHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
GNYCFNVSNASSAVLISPMKTEFIKIACVVISVGTIASFDVAQAAEQNIPETPLPGLDQ
CCEEEEECCCCCEEEEECCHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCC
PRNYLPSAHGTRRLELSISRRQVTLFQGDQVLKSYPVAVGKAGWPTPVGDFEVQTKVRNP
CHHHCCCCCCCEEEEEEEECEEEEEEECCHHHHHCCCEECCCCCCCCCCCEEEEEEECCC
SWQNPFQGKGYVIPGGAPDNPLSTRWLGFWTNGKNWIGFHGTPNRASVGSAASHGCVRMY
CCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHH
DEHIQELFELVAVGTPVKVTR
HHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]