| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158334228
Identifier: 158334228
GI number: 158334228
Start: 1013667
End: 1014251
Strand: Direct
Name: 158334228
Synonym: AM1_1046
Alternate gene names: NA
Gene position: 1013667-1014251 (Clockwise)
Preceding gene: 158334227
Following gene: 158334229
Centisome position: 15.59
GC content: 40.34
Gene sequence:
>585_bases ATGAATATCGGAATTTACATTTATGATGAAGCTGAAGTTCTGGATTTTTCAGGCCCGTTTGAAGTGTTCTCAACGGCAGC AAGAGTTTCAGGAACAGCCGATATTTTTAGCGTTTTTCTGGTGAGTGAAACAGGCAGTATAGTTACAGCCCGTGGAAATT ACAAAGTACAGCCTCATTACGGCTTTTTAAATCATCCATCAATTGATGTTCTTATAATCGTAGGTGGTGTTCATACTAAG GAACTCGAAAAACAACAGGTACTGAGCTGGATTAAAGAGCAGTCTAAAAATGCGCAGCTTGTTGCTTCAGTTTGCACTGG TGTATTTCTATTAGCTGAAGCCCAGGTGCTTTCTAGTCAAAAAGTGACAACGCACTGGGAAGATATTCCAGACCTGCGAA CATCGTATCCAAACTTAGAAGTTATTGACAATCAGCGGTGGGTAGATGAGGACGAAGTCATTACGTCTGGCGGTATATCT GCAGGCATTGATATGAGTCTCCACTTAGTCAGTAAAATTTGCAGCCCAGAATTGGCAGAAAAAACAGCGAAACAAATGGA TTATAAATGGACAAAAAACACATAA
Upstream 100 bases:
>100_bases CCATGATTGTTAAAGAACTTGAAGATGAAGCCAAATGGGATGATGCTGACTCGAAAATATGTACCAACGCTGAAACCAAA GCCGTTATGTGAAAAACAAT
Downstream 100 bases:
>100_bases CAAGTACGGTCAGCAGGACAAACCTAGGCTATGCTCCGGTTTGCCTCTGCTGTAGGCGTTAGGCGCACATGGCAGAGTAT CTGATCCGACAGGCGGTCCC
Product: DJ-1/PfpI family protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain-Containing Protein; Transcriptional Regulator; Transcriptional Regulator AraC Family; ThiJ/PfpI Domain Protein; ThiJ/PfpI; ThiJ/PfpI Family Protein; AraC Family Transcription Regulator; DJ-1/PfpI Family Protein; DJ-1/PfpI Family; AraC-Family Transcriptional Regulator; Transcriptional Activator FtrA; AraC Family Regulatory Helix-Turn-Helix Protein; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein; Transcriptional Regulator Arac Family; ThiH/PfpI Family Amidotransferase; ADPA Family Transcriptional Regulator; Intracellular Protease/Amidase; AraC Family Regulatory Protein; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulator DarR; Regulatory Protein; Transcription Regulator Protein; GATase1_AraC_1 Family Transcriptional Regulator; Transcription Regulator; AraC Family Regulatory Helix-Turn-Helix; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; ThiJ Family Protein; Isonitrile Hydratase; AraC Family Transcription Regulator Protein; Inosine/Uridine-Preferring Nucleoside Hydrolase; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNIGIYIYDEAEVLDFSGPFEVFSTAARVSGTADIFSVFLVSETGSIVTARGNYKVQPHYGFLNHPSIDVLIIVGGVHTK ELEKQQVLSWIKEQSKNAQLVASVCTGVFLLAEAQVLSSQKVTTHWEDIPDLRTSYPNLEVIDNQRWVDEDEVITSGGIS AGIDMSLHLVSKICSPELAEKTAKQMDYKWTKNT
Sequences:
>Translated_194_residues MNIGIYIYDEAEVLDFSGPFEVFSTAARVSGTADIFSVFLVSETGSIVTARGNYKVQPHYGFLNHPSIDVLIIVGGVHTK ELEKQQVLSWIKEQSKNAQLVASVCTGVFLLAEAQVLSSQKVTTHWEDIPDLRTSYPNLEVIDNQRWVDEDEVITSGGIS AGIDMSLHLVSKICSPELAEKTAKQMDYKWTKNT >Mature_194_residues MNIGIYIYDEAEVLDFSGPFEVFSTAARVSGTADIFSVFLVSETGSIVTARGNYKVQPHYGFLNHPSIDVLIIVGGVHTK ELEKQQVLSWIKEQSKNAQLVASVCTGVFLLAEAQVLSSQKVTTHWEDIPDLRTSYPNLEVIDNQRWVDEDEVITSGGIS AGIDMSLHLVSKICSPELAEKTAKQMDYKWTKNT
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21498; Mature: 21498
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIGIYIYDEAEVLDFSGPFEVFSTAARVSGTADIFSVFLVSETGSIVTARGNYKVQPHY CCEEEEEECCCEEEECCCCHHHHHHHHHCCCCHHHHEEEEEECCCCEEEECCCEEECCCC GFLNHPSIDVLIIVGGVHTKELEKQQVLSWIKEQSKNAQLVASVCTGVFLLAEAQVLSSQ CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC KVTTHWEDIPDLRTSYPNLEVIDNQRWVDEDEVITSGGISAGIDMSLHLVSKICSPELAE CCCCCHHCCCHHHHCCCCEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCHHHHH KTAKQMDYKWTKNT HHHHHCCCEECCCC >Mature Secondary Structure MNIGIYIYDEAEVLDFSGPFEVFSTAARVSGTADIFSVFLVSETGSIVTARGNYKVQPHY CCEEEEEECCCEEEECCCCHHHHHHHHHCCCCHHHHEEEEEECCCCEEEECCCEEECCCC GFLNHPSIDVLIIVGGVHTKELEKQQVLSWIKEQSKNAQLVASVCTGVFLLAEAQVLSSQ CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC KVTTHWEDIPDLRTSYPNLEVIDNQRWVDEDEVITSGGISAGIDMSLHLVSKICSPELAE CCCCCHHCCCHHHHCCCCEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCHHHHH KTAKQMDYKWTKNT HHHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA