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The map label for this gene is rfaB [C]

Identifier: 158334206

GI number: 158334206

Start: 992805

End: 993929

Strand: Reverse

Name: rfaB [C]

Synonym: AM1_1024

Alternate gene names: 158334206

Gene position: 993929-992805 (Counterclockwise)

Preceding gene: 158334212

Following gene: 158334205

Centisome position: 15.28

GC content: 47.11

Gene sequence:

>1125_bases
TTGCAAGTGTCCCATCCATCCACAACGATTTCGTTCTTCCTAACTTATTTCGGCGGCGGCGGAGCCGAGCGAGTACTCAT
CAATCTAGCCAATGGATTTGTTAAAAGTGGGTATCAGGTTGACTTTGTTCTAGGGCAAGCTTGGGGGCCCCATCTCAAAA
AAATCCCGTCTGAAATAACGGTGGTTGATTTGAAGGCTGCTGGCAGTTTTGCCAGTATCAGAAAGCTAGCCCAGTACCTC
AAGCACAAAGAACCCCAAGCTTTAATTTCTGGCATGCACTTTGCGAACGAAGTGGCGATTCTAGCAAAACGGCTCGTCAA
GACAAACACTGTTGTCATCGCGACAGAACACAACACGCTCACCCACTCCCTCAGGCACAATAAGAACCGCAAGAAAAGGA
TCATTCCTTTTGCCATTCGCTTGTTATATCCCTGGGCAGATCGTGTCGTCACCGTATCCCAAGGAGCAACTGCCTCCCTA
ACAGAAATCAGCAGTATATCTCCAGATAAAATTACAACGATTTATAATCCAGTCATTGCCCCTGACCTTTTTTCCAAAGC
CAATGCTGATATTGATCATCCCTGGTTCCAACCTGGAGAACCACCGGTCATTATTGGGGTAGGAAAACTCGAACCCCAGA
AGGATTTCCCCACATTAATCCGAGCCTTTGCTAGGGTCCGCAAACAACTCTCCTGTCGATTGGTCATTTTGGGATGGGGA
CCCGATTTAGAAAAACTAAAAGAATTTACAGCCGAAATGGGTGTCCAAGACGATGTTGACTTAATGGGGTATGTGGATAA
TCCTTACCCCTATATGGCTCGTGCTCAGGTATTCACTTTGTCATCCGCATGGGAAGGACTACCCACGGTTTTAATTGAGG
CTTTGGCCTTAGGGAAGCCCGTCGTTTCGACGGATTGTCCCAGTGGCCCTAGGGAAATTTTACAAGGGGGGAAATATGGG
GCATTGACCCCTGTGGGTGATGATGTAGCTTTGGCAGCAGCCATTGGTGATGTTCTTGGACAGCAGTCTCAAAGCGATGT
GTCTGAATGGTTACATCAGTTTTCCATAGAAGCTTCAACCAACCAATATCTGGATTTAATCAACACGCTCAAAACGGCTG
CTTGA

Upstream 100 bases:

>100_bases
ACAAATGCTTAAACGAACCACAAAATCCGCTTGCTGTGTGGAAGATCACATTACAAATTGCGGATGTGTTTAATGATACA
GGTATATCGCCTGGAGTAGC

Downstream 100 bases:

>100_bases
TGATTTTTATATGTTTTGTGTGGGGGTAAACTGTGATTATGAAAAACTCTAAACCTCTTGTTAGCGTTATCATCCCCACT
TTTAATCGAGCTAACCTACT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MQVSHPSTTISFFLTYFGGGGAERVLINLANGFVKSGYQVDFVLGQAWGPHLKKIPSEITVVDLKAAGSFASIRKLAQYL
KHKEPQALISGMHFANEVAILAKRLVKTNTVVIATEHNTLTHSLRHNKNRKKRIIPFAIRLLYPWADRVVTVSQGATASL
TEISSISPDKITTIYNPVIAPDLFSKANADIDHPWFQPGEPPVIIGVGKLEPQKDFPTLIRAFARVRKQLSCRLVILGWG
PDLEKLKEFTAEMGVQDDVDLMGYVDNPYPYMARAQVFTLSSAWEGLPTVLIEALALGKPVVSTDCPSGPREILQGGKYG
ALTPVGDDVALAAAIGDVLGQQSQSDVSEWLHQFSIEASTNQYLDLINTLKTAA

Sequences:

>Translated_374_residues
MQVSHPSTTISFFLTYFGGGGAERVLINLANGFVKSGYQVDFVLGQAWGPHLKKIPSEITVVDLKAAGSFASIRKLAQYL
KHKEPQALISGMHFANEVAILAKRLVKTNTVVIATEHNTLTHSLRHNKNRKKRIIPFAIRLLYPWADRVVTVSQGATASL
TEISSISPDKITTIYNPVIAPDLFSKANADIDHPWFQPGEPPVIIGVGKLEPQKDFPTLIRAFARVRKQLSCRLVILGWG
PDLEKLKEFTAEMGVQDDVDLMGYVDNPYPYMARAQVFTLSSAWEGLPTVLIEALALGKPVVSTDCPSGPREILQGGKYG
ALTPVGDDVALAAAIGDVLGQQSQSDVSEWLHQFSIEASTNQYLDLINTLKTAA
>Mature_374_residues
MQVSHPSTTISFFLTYFGGGGAERVLINLANGFVKSGYQVDFVLGQAWGPHLKKIPSEITVVDLKAAGSFASIRKLAQYL
KHKEPQALISGMHFANEVAILAKRLVKTNTVVIATEHNTLTHSLRHNKNRKKRIIPFAIRLLYPWADRVVTVSQGATASL
TEISSISPDKITTIYNPVIAPDLFSKANADIDHPWFQPGEPPVIIGVGKLEPQKDFPTLIRAFARVRKQLSCRLVILGWG
PDLEKLKEFTAEMGVQDDVDLMGYVDNPYPYMARAQVFTLSSAWEGLPTVLIEALALGKPVVSTDCPSGPREILQGGKYG
ALTPVGDDVALAAAIGDVLGQQSQSDVSEWLHQFSIEASTNQYLDLINTLKTAA

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=281, Percent_Identity=25.9786476868327, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 40858; Mature: 40858

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVSHPSTTISFFLTYFGGGGAERVLINLANGFVKSGYQVDFVLGQAWGPHLKKIPSEIT
CCCCCCCHHHHHHHHHHCCCCHHHEEEEHHHHHHHCCCEEEEEECCCCCHHHHHCCCCEE
VVDLKAAGSFASIRKLAQYLKHKEPQALISGMHFANEVAILAKRLVKTNTVVIATEHNTL
EEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHH
THSLRHNKNRKKRIIPFAIRLLYPWADRVVTVSQGATASLTEISSISPDKITTIYNPVIA
HHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCCCCCHHHHHHCCCCC
PDLFSKANADIDHPWFQPGEPPVIIGVGKLEPQKDFPTLIRAFARVRKQLSCRLVILGWG
CHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECC
PDLEKLKEFTAEMGVQDDVDLMGYVDNPYPYMARAQVFTLSSAWEGLPTVLIEALALGKP
CCHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHEEEEEEHHHHCCHHHHHHHHHHCCCC
VVSTDCPSGPREILQGGKYGALTPVGDDVALAAAIGDVLGQQSQSDVSEWLHQFSIEAST
CCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCH
NQYLDLINTLKTAA
HHHHHHHHHHHHCC
>Mature Secondary Structure
MQVSHPSTTISFFLTYFGGGGAERVLINLANGFVKSGYQVDFVLGQAWGPHLKKIPSEIT
CCCCCCCHHHHHHHHHHCCCCHHHEEEEHHHHHHHCCCEEEEEECCCCCHHHHHCCCCEE
VVDLKAAGSFASIRKLAQYLKHKEPQALISGMHFANEVAILAKRLVKTNTVVIATEHNTL
EEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHH
THSLRHNKNRKKRIIPFAIRLLYPWADRVVTVSQGATASLTEISSISPDKITTIYNPVIA
HHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCCCCCHHHHHHCCCCC
PDLFSKANADIDHPWFQPGEPPVIIGVGKLEPQKDFPTLIRAFARVRKQLSCRLVILGWG
CHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECC
PDLEKLKEFTAEMGVQDDVDLMGYVDNPYPYMARAQVFTLSSAWEGLPTVLIEALALGKP
CCHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHEEEEEEHHHHCCHHHHHHHHHHCCCC
VVSTDCPSGPREILQGGKYGALTPVGDDVALAAAIGDVLGQQSQSDVSEWLHQFSIEAST
CCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCH
NQYLDLINTLKTAA
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]