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The map label for this gene is glgB [H]

Identifier: 158334180

GI number: 158334180

Start: 968642

End: 970951

Strand: Direct

Name: glgB [H]

Synonym: AM1_0996

Alternate gene names: 158334180

Gene position: 968642-970951 (Clockwise)

Preceding gene: 158334179

Following gene: 158334181

Centisome position: 14.89

GC content: 48.66

Gene sequence:

>2310_bases
ATGTCCACCCCTCTTACTGCCGATCAAGTTAATCGAATTGTTTGGAATCACCATCACGATCCCTTCGAGGTTCTCGGTCC
CCATCCCAGTCAAGATGGCAAATCAGGGTGGGTTGTGCGGGCATATTGGCCAAAAGCAGATGCAATTTCTGTGGTGTGTC
CCGAGCACAGACAGGAATATCCCATGCAGAGTGTTCATGATCCTCACTTTTTTGAATGTGAGGTGCCCATCCCCGGAGCG
CTCAATTACCAACTTCGAGTGAAAGAAGGGAGTCATGAGCAAGTCCTGTACGATCCCTACGCTTTCAAGTCTCCCCGAGT
CACAGAATACGATCAGCATTTGTTTGCGGAAGGGAATCACCACCGCATCTATGAAAAGCTGGGCGCACATCTCACCACTT
TAGATGGCGTTGAAGGGGTTTACTTTGCCCTTTGGGCTCCCAATGCCCGTAATGTTTCTCTCTTGGGTGATTTTAATGCC
TGGGATGGACGCCAACATCAGATGCGTAAAGGACCATCCGGCATTTGGGAATTATTCATTCCAGAATTGAGCATCGGCGA
GCACTATAAATACGAAGTCAAAAATTATGAGGGGCATATTTACGAAAAATCTGACCCCTATGGTTTTCAACAAGAAGTCC
GCCCGAAAACCGCTTCTATCGTCACCGATCTCAACTCCTATAGCTGGTCCGATGAGTCCTGGATGGAGCAGCGACGCAAT
GCGGATGCCTTAGCACAACCGATTTCGATTTACGAAGTGCATCTGGGGTCCTGGATGCATGCCTCCTCTGACGAACCTCC
GACATCAGAAGAAGGCCATCCCCTCCCTCCCGTTATTGTCTCTGAGCTGAAGCCTGGCGCTCGGTTCCTTACCTATCGAG
AGTTGGCAGAGCGATTAATTCCCTACGTTAAAGACCTAGGCTTCACCCATATAGAACTCTTGCCTGTGGCCGAGCACCCC
TTTGACGGATCTTGGGGCTATCAAGTGACAGGCTACTACGCCTGTACCTCTCGGTATGGAACTCCCGAAGACTTTATGTA
TTTCGTCGACCAATGCCACCAACAGGACATCGGCGTGATTGTCGATTGGGTCCCAGGACATTTTCCCAAAGACGGCCATG
GTTTAGCCTTTTTTGATGGCACCCATTTATATGAACATGCCGATCCCCGTAAGGGAGAGCATAAAGAATGGGGCACGCTG
GTTTTCAATTACAGCCGCAAGGAAGTCAAGAATTTCCTGATTGCGAATGCCCTCTTTTGGTTCGATAAGTACCATATCGA
TGGCATCCGTGTCGATGCTGTTGCCTCCATGCTCTATCTCAATTACTGTCGCAAGGATGGTGAGTGGGTGGCCAATGAGT
ATGGAGGGGCCGAAAATATCGAAGCGGCAGATTTCCTACGCCACCTCAATGATGTGCTCTTCAGCTACTACCCCGGTATT
CTTTCGATTGCCGAAGAATCAACCTCTTGGCCCATGGTGTCTTGGCCTACCTATGTGGGGGGCTTAGGCTTTAACCTCAA
ATGGAATATGGGATGGATGCATGACATGTTGGATTATTTCAACATGGATCCCTGGTTCCGCCAATTTCATCAAAACAATG
TCACGTTTAGCATCATGTATGCCTTTAGTGAGAACTTTATGTTGGCCCTGTCTCACGATGAAATTGTGCATGGCAAAAGC
AATATGCTGGGCAAAATGCCTGGAGATGAGTGGCAGAAATTTGCTAACTTGCGGTGTCTATACACCTTTATGTTTACCCA
TCCCGGCAAAAAGACTCTATTTATGAGCATGGAGTTTGGACAATGGAGTGAGTGGAACGTCTGGGGAGATTTGGAATGGC
AGCTCTTGCAGTATGACCCCCATCAAAATCTCAAGAAATTTGTTACCGACTTGAACCACCTTTACAAAGAATTACCGGCC
TTATTCACCAACGACTTCAGCTATGACGGTTTTGAGTGGGTCGACTGTAACGACAATCGCCATAGCGTGATCTCCTTTGT
TCGTCGTGCGAAGGACTCGGATGAGTTTGTACTCACAGTCTGCAATTTGACTCCCCAACCTCATAGCCATTACCGAGTGG
GGGTACCCGAAGCGGGCTATTACGTCGAGCGCTTTAATAGCGATGGGCGTCAATACGGCGGGAGTAACATGGGGAATTTA
GGGGGGAAATGGACAGATGAATGGGCTTTCCATAACCGCCCCTACTCTCTAGATCTCTGTTTGCCGCCTTTAGCTACTTT
GGTCTTCACCCTCGATCGGGAAAAAACGGCACAAGCCTACCAGCAACTTCCTGATTCGCAAAATCAATAG

Upstream 100 bases:

>100_bases
TTCTCAAATTCGTTGATCGGATTCTGCTGCAAAAAAGGTAAAATCGGCACTTGCCCGATGCCTTAACTCTTAGCCCTTTT
ATCCCCAGTTAGGTAATTTC

Downstream 100 bases:

>100_bases
GTGTTGCCAATTTCAAGAAACCTGTCACACTGGACTTGGGACAAACGCCTACCATAACTTAAGAAGAGGATGCCCGTATG
GGCGCTACGTTAGAGCAAAT

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 769; Mature: 768

Protein sequence:

>769_residues
MSTPLTADQVNRIVWNHHHDPFEVLGPHPSQDGKSGWVVRAYWPKADAISVVCPEHRQEYPMQSVHDPHFFECEVPIPGA
LNYQLRVKEGSHEQVLYDPYAFKSPRVTEYDQHLFAEGNHHRIYEKLGAHLTTLDGVEGVYFALWAPNARNVSLLGDFNA
WDGRQHQMRKGPSGIWELFIPELSIGEHYKYEVKNYEGHIYEKSDPYGFQQEVRPKTASIVTDLNSYSWSDESWMEQRRN
ADALAQPISIYEVHLGSWMHASSDEPPTSEEGHPLPPVIVSELKPGARFLTYRELAERLIPYVKDLGFTHIELLPVAEHP
FDGSWGYQVTGYYACTSRYGTPEDFMYFVDQCHQQDIGVIVDWVPGHFPKDGHGLAFFDGTHLYEHADPRKGEHKEWGTL
VFNYSRKEVKNFLIANALFWFDKYHIDGIRVDAVASMLYLNYCRKDGEWVANEYGGAENIEAADFLRHLNDVLFSYYPGI
LSIAEESTSWPMVSWPTYVGGLGFNLKWNMGWMHDMLDYFNMDPWFRQFHQNNVTFSIMYAFSENFMLALSHDEIVHGKS
NMLGKMPGDEWQKFANLRCLYTFMFTHPGKKTLFMSMEFGQWSEWNVWGDLEWQLLQYDPHQNLKKFVTDLNHLYKELPA
LFTNDFSYDGFEWVDCNDNRHSVISFVRRAKDSDEFVLTVCNLTPQPHSHYRVGVPEAGYYVERFNSDGRQYGGSNMGNL
GGKWTDEWAFHNRPYSLDLCLPPLATLVFTLDREKTAQAYQQLPDSQNQ

Sequences:

>Translated_769_residues
MSTPLTADQVNRIVWNHHHDPFEVLGPHPSQDGKSGWVVRAYWPKADAISVVCPEHRQEYPMQSVHDPHFFECEVPIPGA
LNYQLRVKEGSHEQVLYDPYAFKSPRVTEYDQHLFAEGNHHRIYEKLGAHLTTLDGVEGVYFALWAPNARNVSLLGDFNA
WDGRQHQMRKGPSGIWELFIPELSIGEHYKYEVKNYEGHIYEKSDPYGFQQEVRPKTASIVTDLNSYSWSDESWMEQRRN
ADALAQPISIYEVHLGSWMHASSDEPPTSEEGHPLPPVIVSELKPGARFLTYRELAERLIPYVKDLGFTHIELLPVAEHP
FDGSWGYQVTGYYACTSRYGTPEDFMYFVDQCHQQDIGVIVDWVPGHFPKDGHGLAFFDGTHLYEHADPRKGEHKEWGTL
VFNYSRKEVKNFLIANALFWFDKYHIDGIRVDAVASMLYLNYCRKDGEWVANEYGGAENIEAADFLRHLNDVLFSYYPGI
LSIAEESTSWPMVSWPTYVGGLGFNLKWNMGWMHDMLDYFNMDPWFRQFHQNNVTFSIMYAFSENFMLALSHDEIVHGKS
NMLGKMPGDEWQKFANLRCLYTFMFTHPGKKTLFMSMEFGQWSEWNVWGDLEWQLLQYDPHQNLKKFVTDLNHLYKELPA
LFTNDFSYDGFEWVDCNDNRHSVISFVRRAKDSDEFVLTVCNLTPQPHSHYRVGVPEAGYYVERFNSDGRQYGGSNMGNL
GGKWTDEWAFHNRPYSLDLCLPPLATLVFTLDREKTAQAYQQLPDSQNQ
>Mature_768_residues
STPLTADQVNRIVWNHHHDPFEVLGPHPSQDGKSGWVVRAYWPKADAISVVCPEHRQEYPMQSVHDPHFFECEVPIPGAL
NYQLRVKEGSHEQVLYDPYAFKSPRVTEYDQHLFAEGNHHRIYEKLGAHLTTLDGVEGVYFALWAPNARNVSLLGDFNAW
DGRQHQMRKGPSGIWELFIPELSIGEHYKYEVKNYEGHIYEKSDPYGFQQEVRPKTASIVTDLNSYSWSDESWMEQRRNA
DALAQPISIYEVHLGSWMHASSDEPPTSEEGHPLPPVIVSELKPGARFLTYRELAERLIPYVKDLGFTHIELLPVAEHPF
DGSWGYQVTGYYACTSRYGTPEDFMYFVDQCHQQDIGVIVDWVPGHFPKDGHGLAFFDGTHLYEHADPRKGEHKEWGTLV
FNYSRKEVKNFLIANALFWFDKYHIDGIRVDAVASMLYLNYCRKDGEWVANEYGGAENIEAADFLRHLNDVLFSYYPGIL
SIAEESTSWPMVSWPTYVGGLGFNLKWNMGWMHDMLDYFNMDPWFRQFHQNNVTFSIMYAFSENFMLALSHDEIVHGKSN
MLGKMPGDEWQKFANLRCLYTFMFTHPGKKTLFMSMEFGQWSEWNVWGDLEWQLLQYDPHQNLKKFVTDLNHLYKELPAL
FTNDFSYDGFEWVDCNDNRHSVISFVRRAKDSDEFVLTVCNLTPQPHSHYRVGVPEAGYYVERFNSDGRQYGGSNMGNLG
GKWTDEWAFHNRPYSLDLCLPPLATLVFTLDREKTAQAYQQLPDSQNQ

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=680, Percent_Identity=27.5, Blast_Score=185, Evalue=1e-46,
Organism=Escherichia coli, GI1789839, Length=759, Percent_Identity=47.562582345191, Blast_Score=694, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=637, Percent_Identity=25.74568288854, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI32564391, Length=610, Percent_Identity=25.4098360655738, Blast_Score=142, Evalue=6e-34,
Organism=Saccharomyces cerevisiae, GI6320826, Length=421, Percent_Identity=30.166270783848, Blast_Score=164, Evalue=4e-41,
Organism=Drosophila melanogaster, GI28573410, Length=621, Percent_Identity=28.9855072463768, Blast_Score=196, Evalue=7e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 89275; Mature: 89143

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPLTADQVNRIVWNHHHDPFEVLGPHPSQDGKSGWVVRAYWPKADAISVVCPEHRQEY
CCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCCHHHCC
PMQSVHDPHFFECEVPIPGALNYQLRVKEGSHEQVLYDPYAFKSPRVTEYDQHLFAEGNH
CHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCC
HRIYEKLGAHLTTLDGVEGVYFALWAPNARNVSLLGDFNAWDGRQHQMRKGPSGIWELFI
HHHHHHHCCCEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHCCCCCEEEEEC
PELSIGEHYKYEVKNYEGHIYEKSDPYGFQQEVRPKTASIVTDLNSYSWSDESWMEQRRN
CCCCCCCCEEEEEECCCCEEEECCCCCCCHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCC
ADALAQPISIYEVHLGSWMHASSDEPPTSEEGHPLPPVIVSELKPGARFLTYRELAERLI
HHHHHCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
PYVKDLGFTHIELLPVAEHPFDGSWGYQVTGYYACTSRYGTPEDFMYFVDQCHQQDIGVI
HHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEE
VDWVPGHFPKDGHGLAFFDGTHLYEHADPRKGEHKEWGTLVFNYSRKEVKNFLIANALFW
EECCCCCCCCCCCEEEEECCCCHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
FDKYHIDGIRVDAVASMLYLNYCRKDGEWVANEYGGAENIEAADFLRHLNDVLFSYYPGI
HHHEECCCEEHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCH
LSIAEESTSWPMVSWPTYVGGLGFNLKWNMGWMHDMLDYFNMDPWFRQFHQNNVTFSIMY
HEEHHCCCCCCEEECCHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCCCEEEEEE
AFSENFMLALSHDEIVHGKSNMLGKMPGDEWQKFANLRCLYTFMFTHPGKKTLFMSMEFG
EECCCEEEEEECCCEECCCCCCCCCCCCHHHHHHHCCEEEEEEEEECCCCEEEEEEEECC
QWSEWNVWGDLEWQLLQYDPHQNLKKFVTDLNHLYKELPALFTNDFSYDGFEWVDCNDNR
CCCCCCEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCH
HSVISFVRRAKDSDEFVLTVCNLTPQPHSHYRVGVPEAGYYVERFNSDGRQYGGSNMGNL
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHEEECCCCHHCCCCCCCCC
GGKWTDEWAFHNRPYSLDLCLPPLATLVFTLDREKTAQAYQQLPDSQNQ
CCCCCCCCHHCCCCEEEEECHHHHHHHHEECCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STPLTADQVNRIVWNHHHDPFEVLGPHPSQDGKSGWVVRAYWPKADAISVVCPEHRQEY
CCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCCHHHCC
PMQSVHDPHFFECEVPIPGALNYQLRVKEGSHEQVLYDPYAFKSPRVTEYDQHLFAEGNH
CHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCC
HRIYEKLGAHLTTLDGVEGVYFALWAPNARNVSLLGDFNAWDGRQHQMRKGPSGIWELFI
HHHHHHHCCCEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHCCCCCEEEEEC
PELSIGEHYKYEVKNYEGHIYEKSDPYGFQQEVRPKTASIVTDLNSYSWSDESWMEQRRN
CCCCCCCCEEEEEECCCCEEEECCCCCCCHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCC
ADALAQPISIYEVHLGSWMHASSDEPPTSEEGHPLPPVIVSELKPGARFLTYRELAERLI
HHHHHCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
PYVKDLGFTHIELLPVAEHPFDGSWGYQVTGYYACTSRYGTPEDFMYFVDQCHQQDIGVI
HHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEE
VDWVPGHFPKDGHGLAFFDGTHLYEHADPRKGEHKEWGTLVFNYSRKEVKNFLIANALFW
EECCCCCCCCCCCEEEEECCCCHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
FDKYHIDGIRVDAVASMLYLNYCRKDGEWVANEYGGAENIEAADFLRHLNDVLFSYYPGI
HHHEECCCEEHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCH
LSIAEESTSWPMVSWPTYVGGLGFNLKWNMGWMHDMLDYFNMDPWFRQFHQNNVTFSIMY
HEEHHCCCCCCEEECCHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCCCEEEEEE
AFSENFMLALSHDEIVHGKSNMLGKMPGDEWQKFANLRCLYTFMFTHPGKKTLFMSMEFG
EECCCEEEEEECCCEECCCCCCCCCCCCHHHHHHHCCEEEEEEEEECCCCEEEEEEEECC
QWSEWNVWGDLEWQLLQYDPHQNLKKFVTDLNHLYKELPALFTNDFSYDGFEWVDCNDNR
CCCCCCEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCH
HSVISFVRRAKDSDEFVLTVCNLTPQPHSHYRVGVPEAGYYVERFNSDGRQYGGSNMGNL
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHEEECCCCHHCCCCCCCCC
GGKWTDEWAFHNRPYSLDLCLPPLATLVFTLDREKTAQAYQQLPDSQNQ
CCCCCCCCHHCCCCEEEEECHHHHHHHHEECCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA