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The map label for this gene is 158334171

Identifier: 158334171

GI number: 158334171

Start: 959749

End: 960897

Strand: Reverse

Name: 158334171

Synonym: AM1_0987

Alternate gene names: NA

Gene position: 960897-959749 (Counterclockwise)

Preceding gene: 158334172

Following gene: 158334170

Centisome position: 14.77

GC content: 50.83

Gene sequence:

>1149_bases
ATGAAGGCTCCGCTCTCCAAACGTACCCCGTTGGGGTGGCTCCAGCTCAGCCATGAAAAAGGCAGATTGTTGGTCGCTTT
AGCCGGTATTGCCTTTGCGGATGTGCTGATGTTTATGCAGATGGGTTTTCAGGCCTCTTTGTTTGTCAGTAATACCCAAC
TGCACCGCACCTTAAATGCGGATATTGTTCTTCTGAGTCCCCAAGCCCGAAATCTGCAAGCCCTGTCCACCTTTTCTCGA
CGACGGTTGTATCAGGCACAGGATGTTCCGGGGGTGAAATTCGCGGAACCCTTCTATATCAATACATTGAACTGGAAAAA
TCCCCAGACCAAGCGAGAAACCTTAGTCCAGGTGATTGGGTTTAATCCTGATCGATCTGCCATGAATCTACCAGGACTGA
CGGAGAAACTTCCCTTGGTGAAACAGCCGGATACGTTTATCTTCGACCGAGGCTCTAGAGGAGATTATGCCGAGTCTTTT
GCCCTCATTGATCAAGGCAAACCTGTGCAGACCGAAGCGCAACGCCGCACTATTACCATTGCCGGATTATTTGAGATGGG
GGCTTCCTTCGGCGCAGATGGGACTTTAATTACCAGTGACCAGAATTTTCTGTTGCAATTTCCTCGACGACAGGCGGGCA
GCATCAATTTGGGGCTAATCCGACTGGAGCCGAATGCGAACCCAGAACAAGTGGTGGCAACCCTAAAGGATCATCTCCCA
GAAGATGTTCAGGTCTTAACCCTGGAAGAGTTTATTGCCTTTGAAACCGCCTACTGGCAGGTGCGTAGCCCCGTGGGTTT
TTATTTTCGGCTTAGGCACCGCGATGGCCTTTGTCGTCGGGGTGGTGATTGTTTACCAGGTGTTGTCCACCGATGTGAAT
GCCCATATTCGCGAGTATGCGACCTTCAAAGCCATGGGCTATCAGAATCGCTATTTCTTAGGGGTGGTGTTCGAAGAAGC
CATTATCCTAGCGGTCCTTGGATTTATCCCCGGTGCCATTCTGCCTATGGGACTGTATGGTTTGGCCCGATCTGCAACAG
CCTTACCCCTATTTATGACCACAGGCCGAGCGATCACAGTATTCGTACTGACGGTGGTGATGTGTACCCTTTCCGGTGCA
ATAGCCACTCGGAAACTCCAGTCCGCTGA

Upstream 100 bases:

>100_bases
TCGATGGCCGAGTGGTGGAGGTTTACATCAAGTTGGACAACACCTCTAGCCAACAGGCTGCCCAATTTACCAATTTGCAA
GTGAATGTGACGGTGCAGTT

Downstream 100 bases:

>100_bases
CCCTGCCGATATGTTCTAGCCCCAAGCCCCCCTCAACCATGAAAGACCCCGTTATCTCTATCCGCCATCTCGACCACTAC
TTCGGTCATGGTCGCCTGCG

Product: DevC protein

Products: NA

Alternate protein names: ABC-Transporter Membrane Spanning Component; ABC Transporter Permease; Glycolipid ABC Exporter Family Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; Membrane Permease Or ABC Transporter Component; Efflux ABC Transporter Permease Protein; DevC-Like ABC Transporter Permease Component; Exporter Subunit DevC- ABC Transporter Family Protein; ABC-Transporter DevC-Like-Protein; ABC Transporter Transmembrane Protein; Permease Protein DevC-Like Protein; ABC Transporter Permease Protein; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC Transporter Permease Component; ABC-Transporter DevC Family Protein; ABC Transporter Membrane Spanning Subunit DevC-Like

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKAPLSKRTPLGWLQLSHEKGRLLVALAGIAFADVLMFMQMGFQASLFVSNTQLHRTLNADIVLLSPQARNLQALSTFSR
RRLYQAQDVPGVKFAEPFYINTLNWKNPQTKRETLVQVIGFNPDRSAMNLPGLTEKLPLVKQPDTFIFDRGSRGDYAESF
ALIDQGKPVQTEAQRRTITIAGLFEMGASFGADGTLITSDQNFLLQFPRRQAGSINLGLIRLEPNANPEQVVATLKDHLP
EDVQVLTLEEFIAFETAYWQVRSPVGFYFRLRHRDGLCRRGGDCLPGVVHRCECPYSRVCDLQSHGLSESLFLRGGVRRS
HYPSGPWIYPRCHSAYGTVWFGPICNSLTPIYDHRPSDHSIRTDGGDVYPFRCNSHSETPVR

Sequences:

>Translated_382_residues
MKAPLSKRTPLGWLQLSHEKGRLLVALAGIAFADVLMFMQMGFQASLFVSNTQLHRTLNADIVLLSPQARNLQALSTFSR
RRLYQAQDVPGVKFAEPFYINTLNWKNPQTKRETLVQVIGFNPDRSAMNLPGLTEKLPLVKQPDTFIFDRGSRGDYAESF
ALIDQGKPVQTEAQRRTITIAGLFEMGASFGADGTLITSDQNFLLQFPRRQAGSINLGLIRLEPNANPEQVVATLKDHLP
EDVQVLTLEEFIAFETAYWQVRSPVGFYFRLRHRDGLCRRGGDCLPGVVHRCECPYSRVCDLQSHGLSESLFLRGGVRRS
HYPSGPWIYPRCHSAYGTVWFGPICNSLTPIYDHRPSDHSIRTDGGDVYPFRCNSHSETPVR
>Mature_382_residues
MKAPLSKRTPLGWLQLSHEKGRLLVALAGIAFADVLMFMQMGFQASLFVSNTQLHRTLNADIVLLSPQARNLQALSTFSR
RRLYQAQDVPGVKFAEPFYINTLNWKNPQTKRETLVQVIGFNPDRSAMNLPGLTEKLPLVKQPDTFIFDRGSRGDYAESF
ALIDQGKPVQTEAQRRTITIAGLFEMGASFGADGTLITSDQNFLLQFPRRQAGSINLGLIRLEPNANPEQVVATLKDHLP
EDVQVLTLEEFIAFETAYWQVRSPVGFYFRLRHRDGLCRRGGDCLPGVVHRCECPYSRVCDLQSHGLSESLFLRGGVRRS
HYPSGPWIYPRCHSAYGTVWFGPICNSLTPIYDHRPSDHSIRTDGGDVYPFRCNSHSETPVR

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43040; Mature: 43040

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAPLSKRTPLGWLQLSHEKGRLLVALAGIAFADVLMFMQMGFQASLFVSNTQLHRTLNA
CCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEECHHEEEECCC
DIVLLSPQARNLQALSTFSRRRLYQAQDVPGVKFAEPFYINTLNWKNPQTKRETLVQVIG
CEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHCC
FNPDRSAMNLPGLTEKLPLVKQPDTFIFDRGSRGDYAESFALIDQGKPVQTEAQRRTITI
CCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCHHHHEEEECCCCCCCCCCCCEEEEE
AGLFEMGASFGADGTLITSDQNFLLQFPRRQAGSINLGLIRLEPNANPEQVVATLKDHLP
EEHHHHCCCCCCCCEEEECCCHHEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCC
EDVQVLTLEEFIAFETAYWQVRSPVGFYFRLRHRDGLCRRGGDCLPGVVHRCECPYSRVC
CCEEEEEHHHHHHHHHHEEEECCCCEEEEEEECCCCHHHCCCCCCHHHHHHCCCCHHHHC
DLQSHGLSESLFLRGGVRRSHYPSGPWIYPRCHSAYGTVWFGPICNSLTPIYDHRPSDHS
CHHHCCCCCHHHEECCCCCCCCCCCCEECCCCCCCCCCEEECHHHCCCCCHHCCCCCCCC
IRTDGGDVYPFRCNSHSETPVR
EECCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MKAPLSKRTPLGWLQLSHEKGRLLVALAGIAFADVLMFMQMGFQASLFVSNTQLHRTLNA
CCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEECHHEEEECCC
DIVLLSPQARNLQALSTFSRRRLYQAQDVPGVKFAEPFYINTLNWKNPQTKRETLVQVIG
CEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHCC
FNPDRSAMNLPGLTEKLPLVKQPDTFIFDRGSRGDYAESFALIDQGKPVQTEAQRRTITI
CCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCHHHHEEEECCCCCCCCCCCCEEEEE
AGLFEMGASFGADGTLITSDQNFLLQFPRRQAGSINLGLIRLEPNANPEQVVATLKDHLP
EEHHHHCCCCCCCCEEEECCCHHEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCC
EDVQVLTLEEFIAFETAYWQVRSPVGFYFRLRHRDGLCRRGGDCLPGVVHRCECPYSRVC
CCEEEEEHHHHHHHHHHEEEECCCCEEEEEEECCCCHHHCCCCCCHHHHHHCCCCHHHHC
DLQSHGLSESLFLRGGVRRSHYPSGPWIYPRCHSAYGTVWFGPICNSLTPIYDHRPSDHS
CHHHCCCCCHHHEECCCCCCCCCCCCEECCCCCCCCCCEEECHHHCCCCCHHCCCCCCCC
IRTDGGDVYPFRCNSHSETPVR
EECCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA