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The map label for this gene is yjcR [C]

Identifier: 158334162

GI number: 158334162

Start: 952776

End: 954077

Strand: Reverse

Name: yjcR [C]

Synonym: AM1_0978

Alternate gene names: 158334162

Gene position: 954077-952776 (Counterclockwise)

Preceding gene: 158334163

Following gene: 158334161

Centisome position: 14.67

GC content: 55.45

Gene sequence:

>1302_bases
ATGAACAGTTGTCCCCTCAAAGTTAAACCCAAACCCTGGTTAATCGGTACGTTAATTGCTGCTATCGCAGCCAGTGGCGG
CATTGTCCTAGTCGGTCTGGCTCAAAGTGGCTGGCAGACCCCCCGCTCTGCAGAATCCAGTGATGTACAACCCACAACCC
TACCAAATATTGCCGCTTTAGGCCGACTCGAACCCACGGGTGAGATTGTCAAAGTTGCCGCTCCTTTGACCCTGGACGGC
GATCGCCTCTCCACACTCAAGGTCAAACTGGGAGATACCGTCCAGGCAGGTGACCCGATTGCTGTATTGGATTCCCGCGA
TCGCTTGTTAGATGAGGTGGCCCAAGCTCAGGCCCAGCTCCGCGTTGCTCAGGTCAAGCTGGCCCAGGTACAGGCAGGGG
CTAAACCGGGCGCTATTAATGCCCAACGAGCAACCGTCTCCCAAGAGTCTGCTGAGTTAACCGGGCAATTGCGAATTCAG
CGGCAAACCATTGCCCGATTGGAAGCCCAATACGAGGGCGATCGCAGTGCCCAAACCGCAGCTGTTCAACGACTTCAGGC
TGAACTACGCACAGCCCAAAAAGAACTGGCCCGTTATCAATCCCTCTATCAAGCGGGAGCCGTTTCTGCGTCCTTGTTCG
ATAGCAAGCAGCTCAGTGTGGATACCACCCGTCAAGCCTTGAAGCAGGCCACTGCAGAACTTTCCCGTACCGACGGGATT
GCCCAGCGCCGCCTCCGGGAAGCCCAGGCAGAGTTGGGTCGGCTGGAAACTACCGGGCAAGCTCAGGTGGCAACGGCCCA
ATCTCGACTGGCAGAAGTGGCAGAAGTCCGGTCCGTGGATATTCAAATGGCTCAAGCAGAGGTGGAAGCGGCTCGGGTCG
CCCTCACTAAGGCCCAGAAAAATCTGGATCGAGCCACCATTAAAGCCCCGAGTGATGGACAGATTCTCAAAATCTACACC
CGACCCGGTGAACAGATGAGCAGTGATGGCATTGTCGCCTTGGGACAAACTGAGCAGATGTTGGTGGTGGCAGAAGTCTA
CCAAAGTGATATTCACCGGGTTCAGGTGGGACAAGCCGCCACGATTCGAGGCCAAGGCTTTCCTGGCGAACTGCGCGGCA
AAGTGATTGAGCTAGGCCGTCAGATTAGTCGCCAGCAGGTCTTTAGTGGCGACCCTGGCGAAAATCTGGATCGTCGCGTG
GTCGAGGTCAAGATTGCCCTTGATCCAAAAGACAGTCAACAAGTTGCCAATCTGAGCAATTTGCAGGTGCAAACGGTGAT
CCAAATTTCCGATGACTCTTGA

Upstream 100 bases:

>100_bases
ATTGACGGTCTGATTATTCAATGTGTCTATAACCGAGGCATTGAAGATATGGACTGGTTCCATCACCAAAGCCAACTTAT
GATTCAAATGGTCTGTAGCC

Downstream 100 bases:

>100_bases
TTTGGCATTTTTTATAACGAACGTTTGATTTTGAAAAGTGGCCATGAACAGTTGGATAAGGCGAAAACGGCCTAAATTTC
TGAAGAGAACCCCTTTAGCC

Product: membrane fusion protein DevB

Products: NA

Alternate protein names: DevB Family ABC Exporter Membrane Fusion Protein; ABC Transporter; DevB-Like Secretion Protein; Secretion Protein HlyD; Secretion Protein HlyD Family Protein; ABC-Transporter Membrane Fusion Protein; Auxiliary Transport Protein MFP Family; Transporter MFP Family; Membrane Fusion Protein Family Protein; Efflux Transporter RND Family MFP Subunit; Glycolipid ABC Transporter Membrane Protein; ABC-Transporter DevB Family Protein; Secretion Protein HlyD Family Protein DevB; Multidrug Resistance Efflux Pump-Like; Membrane Fusion Protein; ABC-Transporter DevB-Like Protein; DevB-Like ABC Transporter Membrane Fusion Protein; ABC-Transporter DevB-Like-Protein; ABC-Transporter Component; ABC Transporter Component; ABC Transporter Component-Like; Membrane Fusion Protein DevB; RTX Secretion Protein D; Permease Protein DevB-Like Protein

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MNSCPLKVKPKPWLIGTLIAAIAASGGIVLVGLAQSGWQTPRSAESSDVQPTTLPNIAALGRLEPTGEIVKVAAPLTLDG
DRLSTLKVKLGDTVQAGDPIAVLDSRDRLLDEVAQAQAQLRVAQVKLAQVQAGAKPGAINAQRATVSQESAELTGQLRIQ
RQTIARLEAQYEGDRSAQTAAVQRLQAELRTAQKELARYQSLYQAGAVSASLFDSKQLSVDTTRQALKQATAELSRTDGI
AQRRLREAQAELGRLETTGQAQVATAQSRLAEVAEVRSVDIQMAQAEVEAARVALTKAQKNLDRATIKAPSDGQILKIYT
RPGEQMSSDGIVALGQTEQMLVVAEVYQSDIHRVQVGQAATIRGQGFPGELRGKVIELGRQISRQQVFSGDPGENLDRRV
VEVKIALDPKDSQQVANLSNLQVQTVIQISDDS

Sequences:

>Translated_433_residues
MNSCPLKVKPKPWLIGTLIAAIAASGGIVLVGLAQSGWQTPRSAESSDVQPTTLPNIAALGRLEPTGEIVKVAAPLTLDG
DRLSTLKVKLGDTVQAGDPIAVLDSRDRLLDEVAQAQAQLRVAQVKLAQVQAGAKPGAINAQRATVSQESAELTGQLRIQ
RQTIARLEAQYEGDRSAQTAAVQRLQAELRTAQKELARYQSLYQAGAVSASLFDSKQLSVDTTRQALKQATAELSRTDGI
AQRRLREAQAELGRLETTGQAQVATAQSRLAEVAEVRSVDIQMAQAEVEAARVALTKAQKNLDRATIKAPSDGQILKIYT
RPGEQMSSDGIVALGQTEQMLVVAEVYQSDIHRVQVGQAATIRGQGFPGELRGKVIELGRQISRQQVFSGDPGENLDRRV
VEVKIALDPKDSQQVANLSNLQVQTVIQISDDS
>Mature_433_residues
MNSCPLKVKPKPWLIGTLIAAIAASGGIVLVGLAQSGWQTPRSAESSDVQPTTLPNIAALGRLEPTGEIVKVAAPLTLDG
DRLSTLKVKLGDTVQAGDPIAVLDSRDRLLDEVAQAQAQLRVAQVKLAQVQAGAKPGAINAQRATVSQESAELTGQLRIQ
RQTIARLEAQYEGDRSAQTAAVQRLQAELRTAQKELARYQSLYQAGAVSASLFDSKQLSVDTTRQALKQATAELSRTDGI
AQRRLREAQAELGRLETTGQAQVATAQSRLAEVAEVRSVDIQMAQAEVEAARVALTKAQKNLDRATIKAPSDGQILKIYT
RPGEQMSSDGIVALGQTEQMLVVAEVYQSDIHRVQVGQAATIRGQGFPGELRGKVIELGRQISRQQVFSGDPGENLDRRV
VEVKIALDPKDSQQVANLSNLQVQTVIQISDDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46436; Mature: 46436

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSCPLKVKPKPWLIGTLIAAIAASGGIVLVGLAQSGWQTPRSAESSDVQPTTLPNIAAL
CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH
GRLEPTGEIVKVAAPLTLDGDRLSTLKVKLGDTVQAGDPIAVLDSRDRLLDEVAQAQAQL
CCCCCCCCEEEEEECEEECCCCEEEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHH
RVAQVKLAQVQAGAKPGAINAQRATVSQESAELTGQLRIQRQTIARLEAQYEGDRSAQTA
HHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHEEHHHHHHHHHHHCCCCCHHHHH
AVQRLQAELRTAQKELARYQSLYQAGAVSASLFDSKQLSVDTTRQALKQATAELSRTDGI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHH
AQRRLREAQAELGRLETTGQAQVATAQSRLAEVAEVRSVDIQMAQAEVEAARVALTKAQK
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLDRATIKAPSDGQILKIYTRPGEQMSSDGIVALGQTEQMLVVAEVYQSDIHRVQVGQAA
CCCHHEEECCCCCCEEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHEEECCCEE
TIRGQGFPGELRGKVIELGRQISRQQVFSGDPGENLDRRVVEVKIALDPKDSQQVANLSN
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHCCCC
LQVQTVIQISDDS
CEEEEEEEECCCC
>Mature Secondary Structure
MNSCPLKVKPKPWLIGTLIAAIAASGGIVLVGLAQSGWQTPRSAESSDVQPTTLPNIAAL
CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH
GRLEPTGEIVKVAAPLTLDGDRLSTLKVKLGDTVQAGDPIAVLDSRDRLLDEVAQAQAQL
CCCCCCCCEEEEEECEEECCCCEEEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHH
RVAQVKLAQVQAGAKPGAINAQRATVSQESAELTGQLRIQRQTIARLEAQYEGDRSAQTA
HHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHEEHHHHHHHHHHHCCCCCHHHHH
AVQRLQAELRTAQKELARYQSLYQAGAVSASLFDSKQLSVDTTRQALKQATAELSRTDGI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHH
AQRRLREAQAELGRLETTGQAQVATAQSRLAEVAEVRSVDIQMAQAEVEAARVALTKAQK
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLDRATIKAPSDGQILKIYTRPGEQMSSDGIVALGQTEQMLVVAEVYQSDIHRVQVGQAA
CCCHHEEECCCCCCEEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHEEECCCEE
TIRGQGFPGELRGKVIELGRQISRQQVFSGDPGENLDRRVVEVKIALDPKDSQQVANLSN
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHCCCC
LQVQTVIQISDDS
CEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA