| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is tar [C]
Identifier: 158334096
GI number: 158334096
Start: 877997
End: 880180
Strand: Direct
Name: tar [C]
Synonym: AM1_0912
Alternate gene names: 158334096
Gene position: 877997-880180 (Clockwise)
Preceding gene: 158334094
Following gene: 158334097
Centisome position: 13.5
GC content: 49.27
Gene sequence:
>2184_bases ATGAGCCTTAAAGCGAAAGCCACCACACTTTCGGTACTCATTGGGGTTGCTCCTGTGGCTGTGGTTGGTACTGCAGCTTA TTTCTTTGGTAGTCAATCGACCACCCAACAAATTATTGAGAACAGGGAAGATTTGGCAGGTAAGATTTCAGCCAAAGTCG CAACCTACATGCGAGATCGATATGGCGATATTCAAATTATGTCCAATTTGGATATCTTCACCGATCCAGCGCTCCGTGCA TCCTCATCAAAGCAGATCAAACAAGCCGCTTTGGATCGATTTATTAAAACCTACGGTGTCTATAACAGCATTGCCTTCTT TGATATGAAAGGGGATGTGATTGCCCAGTCCTCCGGTAAAGCGCTGAGTAATCACAGCAGTCGTAGCTATTTCCAAGCAG CCGTAAAGAGCGGGAAACCCTATATTAGCCAACCGCTGTTATCTAAATCTTCTAAGATTTACTCCATTTACACCGTCAAT GTCGTTCGCGATCAAAAAACAGGTAAGCCCATTGGCGTCGTTCGAGCCAGGATGCCAGTGTCCAATGTAGAAAACCTATT GACCGGGGTTGAGGGTTTTGAAAACGCCTATTTGATAGATAAAGATGGCCAGCTTTTTGCAGGATCTAATGCAGGTAAAG AGAGAATCGCAGCAGCCAATGCAACAGGTACGCCGATTTCAGCGAATGATGAGTTCTCCTGGTATAAAACGGTTAAAGAC TCGAAACAGTCAGACCACGTGCTGACATCCGATAAGTTAGAGAGTTTTGTTCCCTTTTCAGCGATTCGCCCAGATAACCC TTATCTAAAAGAGTTGCCTACTTTGGGTTGGAAAACCATTCTAGAAACAGACAAAGGGCAAGCTTTTAGTTCAGTGCAAC AGCTTCTATGGACCATTCTCCTGGGTTCCGCCGCCACCGCTGTTGTGATTGGTGCGATTGCGGTTTTGGTTGCAGAACGA GCCACCCGTCCGATTACCGATTCTGCAGACGCGGTGGATGCGATTGGTCAGGGAGACTTGGATGCTCGAGTGCAAGTCTC CGGCGACGATGAACTAGCCCAATTGGGTGGCAATATTAACCAAATGGCGGAGCAAATTCAGACGCTGATTTTGGAGCAAG AATATGCCGCTCAGCAGGAACTAGACCGGCAGACTGAAACCGCAGAACAACAGCGGAAACAGAACGAGCAATTGCAATCT GATTTGCTGACCCTGCTAACCGACGTTGAAGCCGCTTCTGATGGAGACCTAACCGTCCGAGCCAACGTGGACGCCAGCGA AATCGGAATTGTGGGTGACTTCTTTAACTCCATTATTGAAAACTTGAGAGACATTGTAGCCCAGGTACAGGTTGCTGCGA CCCAGGTGAACGAGTCGGTGTCGACCAGCAGTTCTTCCATTGTGGACCTGGCTGACGATGCGAGTTCCCAGGCCGAGCAG GTGGAACAATCTCTACAATTCGTGGAAGACTTGACCCAAGCCGCCCAAGAAGTTGCAGATAACGCTCAGCAGGCTGCCGA AATTGCCAAAACAGCATCTGAAACGGCGGTGAATGGTGGAGCCACCATGGATCTAACAGTGGCCAGTATTGACCAGCTGC GTGAAACCGTTGCTGAAACGGCGAAGAAGGTGAAACGATTGGGTGAATCGTCTCAGCAGATTTCTAAAGCGGTTTCTTTG ATTAACCAAATTGCGTTGCAGACCAACTTGCTGGCGATTAACGCCAGTATTGAGGCAGCTCGAGCTGGAGAAGAAGGTCG AGGCTTCGCGGTGGTTGCGGAAGAAGTGGGTGCCCTAGCGTCTCAGTCAGCAACAGCCACCAAGGAAATTGAGCAGATTG TGGAGACCATTCAGCTAGAAACTGCTGAGGTGGTCAACGCGATGGAAGTGGGTACAACCCAGGTGGTCGAAGGTACGCGC ATGGTTCAAGATACCAAACAAAGCCTGGGCCAGATTGTGTCTGTGTCCCAACAGATTGCAGACCTGGTGCAAACCATTTC GGGTTCTACTGCATCCCAGACGGCGAAAGCCCAGATGCTGTCTAAGCTGGTTCAAAACGTGGCGAAGGTGTCTGAGAACA CCTCCGATTCTTCTCGCCAAGTGGCCGGATCACTGCAAGAAACGGTGGAAATTGCCAAGCAGCTTCAAGCTTCCGTGAGT ACCTTCAAAATTAGCGAAGCCTAA
Upstream 100 bases:
>100_bases CTCAGACGGGTCTAAAGCAGTTGCAGCTATTCAAGCCAACCCCGCCCCTAGCGCTGAACCCGTGCCGGAAGCAGCGACGG TTAAACCCCTATGGCAGCGG
Downstream 100 bases:
>100_bases TTAGACGACCGATGGGTCAAAGCAGAATTAGGTATGCCTAAGCCAGCTTTGACCCGCCATTTTTATACAACACCCAACAA GATTGAGTCCATCTTGATAT
Product: methyl-accepting chemotaxis signaling protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 727; Mature: 726
Protein sequence:
>727_residues MSLKAKATTLSVLIGVAPVAVVGTAAYFFGSQSTTQQIIENREDLAGKISAKVATYMRDRYGDIQIMSNLDIFTDPALRA SSSKQIKQAALDRFIKTYGVYNSIAFFDMKGDVIAQSSGKALSNHSSRSYFQAAVKSGKPYISQPLLSKSSKIYSIYTVN VVRDQKTGKPIGVVRARMPVSNVENLLTGVEGFENAYLIDKDGQLFAGSNAGKERIAAANATGTPISANDEFSWYKTVKD SKQSDHVLTSDKLESFVPFSAIRPDNPYLKELPTLGWKTILETDKGQAFSSVQQLLWTILLGSAATAVVIGAIAVLVAER ATRPITDSADAVDAIGQGDLDARVQVSGDDELAQLGGNINQMAEQIQTLILEQEYAAQQELDRQTETAEQQRKQNEQLQS DLLTLLTDVEAASDGDLTVRANVDASEIGIVGDFFNSIIENLRDIVAQVQVAATQVNESVSTSSSSIVDLADDASSQAEQ VEQSLQFVEDLTQAAQEVADNAQQAAEIAKTASETAVNGGATMDLTVASIDQLRETVAETAKKVKRLGESSQQISKAVSL INQIALQTNLLAINASIEAARAGEEGRGFAVVAEEVGALASQSATATKEIEQIVETIQLETAEVVNAMEVGTTQVVEGTR MVQDTKQSLGQIVSVSQQIADLVQTISGSTASQTAKAQMLSKLVQNVAKVSENTSDSSRQVAGSLQETVEIAKQLQASVS TFKISEA
Sequences:
>Translated_727_residues MSLKAKATTLSVLIGVAPVAVVGTAAYFFGSQSTTQQIIENREDLAGKISAKVATYMRDRYGDIQIMSNLDIFTDPALRA SSSKQIKQAALDRFIKTYGVYNSIAFFDMKGDVIAQSSGKALSNHSSRSYFQAAVKSGKPYISQPLLSKSSKIYSIYTVN VVRDQKTGKPIGVVRARMPVSNVENLLTGVEGFENAYLIDKDGQLFAGSNAGKERIAAANATGTPISANDEFSWYKTVKD SKQSDHVLTSDKLESFVPFSAIRPDNPYLKELPTLGWKTILETDKGQAFSSVQQLLWTILLGSAATAVVIGAIAVLVAER ATRPITDSADAVDAIGQGDLDARVQVSGDDELAQLGGNINQMAEQIQTLILEQEYAAQQELDRQTETAEQQRKQNEQLQS DLLTLLTDVEAASDGDLTVRANVDASEIGIVGDFFNSIIENLRDIVAQVQVAATQVNESVSTSSSSIVDLADDASSQAEQ VEQSLQFVEDLTQAAQEVADNAQQAAEIAKTASETAVNGGATMDLTVASIDQLRETVAETAKKVKRLGESSQQISKAVSL INQIALQTNLLAINASIEAARAGEEGRGFAVVAEEVGALASQSATATKEIEQIVETIQLETAEVVNAMEVGTTQVVEGTR MVQDTKQSLGQIVSVSQQIADLVQTISGSTASQTAKAQMLSKLVQNVAKVSENTSDSSRQVAGSLQETVEIAKQLQASVS TFKISEA >Mature_726_residues SLKAKATTLSVLIGVAPVAVVGTAAYFFGSQSTTQQIIENREDLAGKISAKVATYMRDRYGDIQIMSNLDIFTDPALRAS SSKQIKQAALDRFIKTYGVYNSIAFFDMKGDVIAQSSGKALSNHSSRSYFQAAVKSGKPYISQPLLSKSSKIYSIYTVNV VRDQKTGKPIGVVRARMPVSNVENLLTGVEGFENAYLIDKDGQLFAGSNAGKERIAAANATGTPISANDEFSWYKTVKDS KQSDHVLTSDKLESFVPFSAIRPDNPYLKELPTLGWKTILETDKGQAFSSVQQLLWTILLGSAATAVVIGAIAVLVAERA TRPITDSADAVDAIGQGDLDARVQVSGDDELAQLGGNINQMAEQIQTLILEQEYAAQQELDRQTETAEQQRKQNEQLQSD LLTLLTDVEAASDGDLTVRANVDASEIGIVGDFFNSIIENLRDIVAQVQVAATQVNESVSTSSSSIVDLADDASSQAEQV EQSLQFVEDLTQAAQEVADNAQQAAEIAKTASETAVNGGATMDLTVASIDQLRETVAETAKKVKRLGESSQQISKAVSLI NQIALQTNLLAINASIEAARAGEEGRGFAVVAEEVGALASQSATATKEIEQIVETIQLETAEVVNAMEVGTTQVVEGTRM VQDTKQSLGQIVSVSQQIADLVQTISGSTASQTAKAQMLSKLVQNVAKVSENTSDSSRQVAGSLQETVEIAKQLQASVST FKISEA
Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788195, Length=278, Percent_Identity=30.5755395683453, Blast_Score=121, Evalue=2e-28, Organism=Escherichia coli, GI1787690, Length=319, Percent_Identity=30.0940438871473, Blast_Score=120, Evalue=3e-28, Organism=Escherichia coli, GI2367378, Length=323, Percent_Identity=30.030959752322, Blast_Score=119, Evalue=7e-28, Organism=Escherichia coli, GI1788194, Length=258, Percent_Identity=32.9457364341085, Blast_Score=112, Evalue=8e-26, Organism=Escherichia coli, GI1789453, Length=284, Percent_Identity=30.6338028169014, Blast_Score=97, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003018 - InterPro: IPR003660 - InterPro: IPR016132 [H]
Pfam domain/function: PF01590 GAF; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 77593; Mature: 77461
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKAKATTLSVLIGVAPVAVVGTAAYFFGSQSTTQQIIENREDLAGKISAKVATYMRDR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHH YGDIQIMSNLDIFTDPALRASSSKQIKQAALDRFIKTYGVYNSIAFFDMKGDVIAQSSGK CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCEEEEECCCCEEECCCCC ALSNHSSRSYFQAAVKSGKPYISQPLLSKSSKIYSIYTVNVVRDQKTGKPIGVVRARMPV HHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHEECCCH SNVENLLTGVEGFENAYLIDKDGQLFAGSNAGKERIAAANATGTPISANDEFSWYKTVKD HHHHHHHHHHHCCCCCEEECCCCCEEECCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHC SKQSDHVLTSDKLESFVPFSAIRPDNPYLKELPTLGWKTILETDKGQAFSSVQQLLWTIL CCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHH LGSAATAVVIGAIAVLVAERATRPITDSADAVDAIGQGDLDARVQVSGDDELAQLGGNIN HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEECCCHHHHHHCCCHH QMAEQIQTLILEQEYAAQQELDRQTETAEQQRKQNEQLQSDLLTLLTDVEAASDGDLTVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE ANVDASEIGIVGDFFNSIIENLRDIVAQVQVAATQVNESVSTSSSSIVDLADDASSQAEQ ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHH VEQSLQFVEDLTQAAQEVADNAQQAAEIAKTASETAVNGGATMDLTVASIDQLRETVAET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH AKKVKRLGESSQQISKAVSLINQIALQTNLLAINASIEAARAGEEGRGFAVVAEEVGALA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHCCCCCCCEEEEHHHHHHHH SQSATATKEIEQIVETIQLETAEVVNAMEVGTTQVVEGTRMVQDTKQSLGQIVSVSQQIA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLVQTISGSTASQTAKAQMLSKLVQNVAKVSENTSDSSRQVAGSLQETVEIAKQLQASVS HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TFKISEA HEEECCC >Mature Secondary Structure SLKAKATTLSVLIGVAPVAVVGTAAYFFGSQSTTQQIIENREDLAGKISAKVATYMRDR CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHH YGDIQIMSNLDIFTDPALRASSSKQIKQAALDRFIKTYGVYNSIAFFDMKGDVIAQSSGK CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCEEEEECCCCEEECCCCC ALSNHSSRSYFQAAVKSGKPYISQPLLSKSSKIYSIYTVNVVRDQKTGKPIGVVRARMPV HHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHEECCCH SNVENLLTGVEGFENAYLIDKDGQLFAGSNAGKERIAAANATGTPISANDEFSWYKTVKD HHHHHHHHHHHCCCCCEEECCCCCEEECCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHC SKQSDHVLTSDKLESFVPFSAIRPDNPYLKELPTLGWKTILETDKGQAFSSVQQLLWTIL CCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHH LGSAATAVVIGAIAVLVAERATRPITDSADAVDAIGQGDLDARVQVSGDDELAQLGGNIN HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEECCCHHHHHHCCCHH QMAEQIQTLILEQEYAAQQELDRQTETAEQQRKQNEQLQSDLLTLLTDVEAASDGDLTVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE ANVDASEIGIVGDFFNSIIENLRDIVAQVQVAATQVNESVSTSSSSIVDLADDASSQAEQ ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHH VEQSLQFVEDLTQAAQEVADNAQQAAEIAKTASETAVNGGATMDLTVASIDQLRETVAET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH AKKVKRLGESSQQISKAVSLINQIALQTNLLAINASIEAARAGEEGRGFAVVAEEVGALA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHCCCCCCCEEEEHHHHHHHH SQSATATKEIEQIVETIQLETAEVVNAMEVGTTQVVEGTRMVQDTKQSLGQIVSVSQQIA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLVQTISGSTASQTAKAQMLSKLVQNVAKVSENTSDSSRQVAGSLQETVEIAKQLQASVS HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TFKISEA HEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]