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The map label for this gene is ureF

Identifier: 158334054

GI number: 158334054

Start: 847286

End: 847966

Strand: Reverse

Name: ureF

Synonym: AM1_0868

Alternate gene names: 158334054

Gene position: 847966-847286 (Counterclockwise)

Preceding gene: 158334055

Following gene: 158334053

Centisome position: 13.04

GC content: 49.93

Gene sequence:

>681_bases
TTGGATACTACTCAGCGCTTACTTCAACTCACTAGTCCTGCTTTACCAGTCGGGGCCTATAGCTATTCTGAAGGCCTAGA
ATGGTTAGTTGACCAGGGAACGATAGACAACGAATCCCACTTGCGGACATGGTTGCTGCAAGAGCTAGCCTATGGATCCA
TCCGTATGGAAGCTGCGGTCATGGTTCGTGGGTATCGAGCGAGCACCGATGTGCAAATATTGCAGTACTGGAATGCCTGG
TTATCCGCTGCCAGGGAAACAGAAGAGTTGAGATTACAAAGCTTACAGATGGGGCGATCGCTTTTGCGATTATCTAAAGC
CTTGCAAGATCCAGAACACACTGGCCCTGAATTGATTGAGGTTTGGGAGCAATTACAGACTGGGTGCAATTTTGCGATCG
CATTTGGACTCACCGCCAACCTCTGGCAAATTCCCTTAGAGTCAGCCACCCTCGGATATCTCCACAGTTGGGCCACCAAT
CTAATTAGCGCCGGGATTAAGCTGATCCCATTGGGGCAAACCACAGGCCAACAGCTGCTCTTTCAGCTACAGCCCCATAT
CGAAGCAGCCACCCAATCCATCCTTTTATTAGAAGACAAGGATCTCTGTAGCTGTGGCTGGGGACTTGCCCTGGCTAGTA
TGGCTCACGAGACGCAATACAGTCGTTTGTTTCGCAGTTAA

Upstream 100 bases:

>100_bases
CCTAAATTTAATTTTTGGATCACGAGTGGCTCATCTGCAACCCACATATGTGCCTTTGTGATCATGACAATAACGTCGAG
TCTCTTTCTCTTCTATCAAC

Downstream 100 bases:

>100_bases
AACATTAGAACTATAGGCCCACTAAGGCTTGTAAGATACTGGCAGCCTTTTTATTTATCAACCTTCTAATAACCCTAGGA
CTGACTCAAATGAATTCCCT

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MDTTQRLLQLTSPALPVGAYSYSEGLEWLVDQGTIDNESHLRTWLLQELAYGSIRMEAAVMVRGYRASTDVQILQYWNAW
LSAARETEELRLQSLQMGRSLLRLSKALQDPEHTGPELIEVWEQLQTGCNFAIAFGLTANLWQIPLESATLGYLHSWATN
LISAGIKLIPLGQTTGQQLLFQLQPHIEAATQSILLLEDKDLCSCGWGLALASMAHETQYSRLFRS

Sequences:

>Translated_226_residues
MDTTQRLLQLTSPALPVGAYSYSEGLEWLVDQGTIDNESHLRTWLLQELAYGSIRMEAAVMVRGYRASTDVQILQYWNAW
LSAARETEELRLQSLQMGRSLLRLSKALQDPEHTGPELIEVWEQLQTGCNFAIAFGLTANLWQIPLESATLGYLHSWATN
LISAGIKLIPLGQTTGQQLLFQLQPHIEAATQSILLLEDKDLCSCGWGLALASMAHETQYSRLFRS
>Mature_226_residues
MDTTQRLLQLTSPALPVGAYSYSEGLEWLVDQGTIDNESHLRTWLLQELAYGSIRMEAAVMVRGYRASTDVQILQYWNAW
LSAARETEELRLQSLQMGRSLLRLSKALQDPEHTGPELIEVWEQLQTGCNFAIAFGLTANLWQIPLESATLGYLHSWATN
LISAGIKLIPLGQTTGQQLLFQLQPHIEAATQSILLLEDKDLCSCGWGLALASMAHETQYSRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_ACAM1 (B0BYM7)

Other databases:

- EMBL:   CP000828
- RefSeq:   YP_001515226.1
- GeneID:   5679695
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_0868
- HOGENOM:   HBG709295
- OMA:   SPQLPIG
- ProtClustDB:   CLSK892793
- BioCyc:   AMAR329726:AM1_0868-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 25335; Mature: 25335

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTTQRLLQLTSPALPVGAYSYSEGLEWLVDQGTIDNESHLRTWLLQELAYGSIRMEAAV
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHH
MVRGYRASTDVQILQYWNAWLSAARETEELRLQSLQMGRSLLRLSKALQDPEHTGPELIE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
VWEQLQTGCNFAIAFGLTANLWQIPLESATLGYLHSWATNLISAGIKLIPLGQTTGQQLL
HHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHH
FQLQPHIEAATQSILLLEDKDLCSCGWGLALASMAHETQYSRLFRS
HHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDTTQRLLQLTSPALPVGAYSYSEGLEWLVDQGTIDNESHLRTWLLQELAYGSIRMEAAV
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHH
MVRGYRASTDVQILQYWNAWLSAARETEELRLQSLQMGRSLLRLSKALQDPEHTGPELIE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
VWEQLQTGCNFAIAFGLTANLWQIPLESATLGYLHSWATNLISAGIKLIPLGQTTGQQLL
HHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHH
FQLQPHIEAATQSILLLEDKDLCSCGWGLALASMAHETQYSRLFRS
HHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA