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The map label for this gene is yjcF [C]

Identifier: 158334009

GI number: 158334009

Start: 803099

End: 804364

Strand: Reverse

Name: yjcF [C]

Synonym: AM1_0823

Alternate gene names: 158334009

Gene position: 804364-803099 (Counterclockwise)

Preceding gene: 158334014

Following gene: 158334008

Centisome position: 12.37

GC content: 47.08

Gene sequence:

>1266_bases
ATGCTGTTCAATGCAGCTTCAGCAGGCGTTTGTTTAATCCTGCTTCTATGGTTGGTGCCCCAGTGGCAGGTTAACCAACT
TCCTGTCTTAGATCAGAATCGTCTGCAACAATTACCCATAACGGATCAACTGCAACTGGAACGAGAAGAGACTTATCGGC
GTGCACAACTGGAAGGAAAACAGCGGGATACCTTGCTGCTAGTAATCCTAGGATTGTTGGGGGGCTTGGGGACATACTTC
TCTTGGCAAAATTACCACAGACAAAATCGAAGGCACAATATTCATGATTTCCGCAAAGCAGTGGAGTTGTTGGCGGCCAA
AGACAAGATAGAAGTGCGATTGGGGGGAATATATCTTCTGGAACAAATCGCTAGTGATTCTTCTGAACAACAAGCGATTG
TGTTGGAAATTCTAACGGCTTATATCCGAGAACATAGCACCAGAGTGGGAGATACCCGACAGTTGGGGTCTAATGAAGTC
AATACCTTGAGAGTACCCACGGATATTCAAGCTGCCCTGACCGTGATTGCCCGATGCCATGGTCAATTCGAAACGAGTTC
CTTGGACTTTCAAGATGCCTATTTGATTCAAGCCAACTTAATTCAAGGGAATTTTCAGGGTGCTAACTTCCAAGGGACTT
ACCTGATTGGAACCAATCTCCGGGAGGCAGACCTACGGGAAGCCAATCTTCGTAATGCGGATCTCTTAAGTGCCAATCTG
AGTGAGGCGGATTTGACCCAGGCCAATCTCAGCAGTGCCAATTTGTTGGGGACCAATCTGAATAGTGCCAATTTTCAAAA
TGCCGATTTGACGGGAGCCAATCTGCGGGGGGCGTATCTGGGTAGTGCGAATCTCCTGGGGGCCAATCTGAATAGTGCAG
ATTTAATTGGTGTTTATCTTAGTGATGCCAATCTGAGTCACGCAAAATTAGTGGGTGCTAACCTTCGGACGGCGAAGCTT
ATCGGGGCACAGCTTGCGGATACGGATTTAAGTGAAGCCAATTTCACAGGGGCTGATTTGAGTGATGCCAATCTGGAGGG
AGCAGATTTTACCGATGCCAATCTCCGGGAGGTTTCTTTCCAACGTACTCAATTTCGAGAGGCTGATCTGAGTGGGGCTG
ATCTACGGGGGGCTATTTTTCTAGAAGTCGATCAGTTAGAAGAGTGCAAACTGTGCCGGACTAAATTACCTGACCATCTT
GAACTAGATGCCAATCGAGATTGTGCTTCAATCACTCTCGCAGATCAATCGGTTACGTCACAATAA

Upstream 100 bases:

>100_bases
TAATTCCTTCAGCTTATTTCTAAGCAAGTAGCCTACTGTTAAGACGGTGAGACGTAAGGTGACTCGGTATACCTCTCCCC
AAAATCATCTGACTCAGAGA

Downstream 100 bases:

>100_bases
AATAGTAAGTTCTTACCTGTTGCCAATTAGGAATTTCCCATGCCAAATTTCTTAAACAACCTTTTGGGACGCCATCCTGA
GCGAGTCAAGGCCAACACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MLFNAASAGVCLILLLWLVPQWQVNQLPVLDQNRLQQLPITDQLQLEREETYRRAQLEGKQRDTLLLVILGLLGGLGTYF
SWQNYHRQNRRHNIHDFRKAVELLAAKDKIEVRLGGIYLLEQIASDSSEQQAIVLEILTAYIREHSTRVGDTRQLGSNEV
NTLRVPTDIQAALTVIARCHGQFETSSLDFQDAYLIQANLIQGNFQGANFQGTYLIGTNLREADLREANLRNADLLSANL
SEADLTQANLSSANLLGTNLNSANFQNADLTGANLRGAYLGSANLLGANLNSADLIGVYLSDANLSHAKLVGANLRTAKL
IGAQLADTDLSEANFTGADLSDANLEGADFTDANLREVSFQRTQFREADLSGADLRGAIFLEVDQLEECKLCRTKLPDHL
ELDANRDCASITLADQSVTSQ

Sequences:

>Translated_421_residues
MLFNAASAGVCLILLLWLVPQWQVNQLPVLDQNRLQQLPITDQLQLEREETYRRAQLEGKQRDTLLLVILGLLGGLGTYF
SWQNYHRQNRRHNIHDFRKAVELLAAKDKIEVRLGGIYLLEQIASDSSEQQAIVLEILTAYIREHSTRVGDTRQLGSNEV
NTLRVPTDIQAALTVIARCHGQFETSSLDFQDAYLIQANLIQGNFQGANFQGTYLIGTNLREADLREANLRNADLLSANL
SEADLTQANLSSANLLGTNLNSANFQNADLTGANLRGAYLGSANLLGANLNSADLIGVYLSDANLSHAKLVGANLRTAKL
IGAQLADTDLSEANFTGADLSDANLEGADFTDANLREVSFQRTQFREADLSGADLRGAIFLEVDQLEECKLCRTKLPDHL
ELDANRDCASITLADQSVTSQ
>Mature_421_residues
MLFNAASAGVCLILLLWLVPQWQVNQLPVLDQNRLQQLPITDQLQLEREETYRRAQLEGKQRDTLLLVILGLLGGLGTYF
SWQNYHRQNRRHNIHDFRKAVELLAAKDKIEVRLGGIYLLEQIASDSSEQQAIVLEILTAYIREHSTRVGDTRQLGSNEV
NTLRVPTDIQAALTVIARCHGQFETSSLDFQDAYLIQANLIQGNFQGANFQGTYLIGTNLREADLREANLRNADLLSANL
SEADLTQANLSSANLLGTNLNSANFQNADLTGANLRGAYLGSANLLGANLNSADLIGVYLSDANLSHAKLVGANLRTAKL
IGAQLADTDLSEANFTGADLSDANLEGADFTDANLREVSFQRTQFREADLSGADLRGAIFLEVDQLEECKLCRTKLPDHL
ELDANRDCASITLADQSVTSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=155, Percent_Identity=38.0645161290323, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI221377802, Length=170, Percent_Identity=38.2352941176471, Blast_Score=88, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 46309; Mature: 46309

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFNAASAGVCLILLLWLVPQWQVNQLPVLDQNRLQQLPITDQLQLEREETYRRAQLEGK
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
QRDTLLLVILGLLGGLGTYFSWQNYHRQNRRHNIHDFRKAVELLAAKDKIEVRLGGIYLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECHHHHH
EQIASDSSEQQAIVLEILTAYIREHSTRVGDTRQLGSNEVNTLRVPTDIQAALTVIARCH
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEECCCHHHHHHHHHHHHC
GQFETSSLDFQDAYLIQANLIQGNFQGANFQGTYLIGTNLREADLREANLRNADLLSANL
CCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHCCCCCCCEEECCC
SEADLTQANLSSANLLGTNLNSANFQNADLTGANLRGAYLGSANLLGANLNSADLIGVYL
CHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCEEEEEEE
SDANLSHAKLVGANLRTAKLIGAQLADTDLSEANFTGADLSDANLEGADFTDANLREVSF
ECCCCCHHEEECCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
QRTQFREADLSGADLRGAIFLEVDQLEECKLCRTKLPDHLELDANRDCASITLADQSVTS
HHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCEEECCCCCEEEEEEECCCCCC
Q
C
>Mature Secondary Structure
MLFNAASAGVCLILLLWLVPQWQVNQLPVLDQNRLQQLPITDQLQLEREETYRRAQLEGK
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
QRDTLLLVILGLLGGLGTYFSWQNYHRQNRRHNIHDFRKAVELLAAKDKIEVRLGGIYLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECHHHHH
EQIASDSSEQQAIVLEILTAYIREHSTRVGDTRQLGSNEVNTLRVPTDIQAALTVIARCH
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEECCCHHHHHHHHHHHHC
GQFETSSLDFQDAYLIQANLIQGNFQGANFQGTYLIGTNLREADLREANLRNADLLSANL
CCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHCCCCCCCEEECCC
SEADLTQANLSSANLLGTNLNSANFQNADLTGANLRGAYLGSANLLGANLNSADLIGVYL
CHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCEEEEEEE
SDANLSHAKLVGANLRTAKLIGAQLADTDLSEANFTGADLSDANLEGADFTDANLREVSF
ECCCCCHHEEECCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
QRTQFREADLSGADLRGAIFLEVDQLEECKLCRTKLPDHLELDANRDCASITLADQSVTS
HHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCEEECCCCCEEEEEEECCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA