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The map label for this gene is yedY [H]

Identifier: 158333989

GI number: 158333989

Start: 779796

End: 780803

Strand: Reverse

Name: yedY [H]

Synonym: AM1_0802

Alternate gene names: 158333989

Gene position: 780803-779796 (Counterclockwise)

Preceding gene: 158333991

Following gene: 158333987

Centisome position: 12.01

GC content: 50.4

Gene sequence:

>1008_bases
ATGGTTCTTATTCGCATTCCTAAGCCTTGGCAGATCGAATCGCAGCCGATCACTTCAGAAACGGCTTATTGGCATCGGCG
ACGATTTCTAAAAAATATGATTGGCTTTGGCATTGGTGCAACCGTCTTTCCCAGCATTAGTTGTTCTCGGTCAGATAGCG
AGATTGAGCCGGACCTCCAGGCAACGTTACCTCAAGGCCAGCTTCCTAATGTCAAACGGTCTCCCATCTATTCTGGACAG
GGATTGACGGTGACGCCAGAGGCGAAAACGAGTCGCTATAACAATTTCTATGAATTTGGCGGGACAAAAGATATTTGGCA
AGCGGCTCAAGCGCTGCCGACGGATCCTTGGAAGTTGGAGGTGACGGGGCTGGTAAATCGGCCTCAGACCTATGATTTGG
ATGATTTAACCCAGAAATTCCCCCTAGAGGAACGGATCTACCGATTTAGATGTGTAGAAGCTTGGGCCATGGTGGTGCCG
TGGTTGGGATTCCCGATGCGATCGCTACTGCAAGACGTCGAACCCAAATCCAATGCCAAGTTTGTGCGCTTTACCTCTTA
CTACGATCCCCAGGTCACCCCTGGCCCCGGCGGGTTTACGGATTCCAGCGGTTTGCCCTGGCCCTACACAGAAAGCTTGC
GAATTGATGAAATGGCCCATGACTTAGCGTTTTTTGCGGTGGGGATTTATGGCCATCTCTTGCCGAAACAGCATGGGGCA
CCGATCCGCATGGTTACGCCGTGGAAATATGGATTCAAGGGTGCGAAATCCATTGTTAAAATTGAGTTTATGAACTTTCA
GCCCCCCACCTTTTGGAATACCTTAGCGCCGGATGAATATGGGTTTGAAGCCAATGTCAACCCGAATATTCCCCATCCTC
GTTGGTCTCAAGCGGAGGAGCGTTTGATTGGCACTGGGGTGCATCCAGCCGTATGGGAACGACAGCCCACGTTAATTTAT
AACGGCTACCCTGAAGTGGCTCCATTATATGGAGGCGTCTTGAATTAG

Upstream 100 bases:

>100_bases
TGACTTCGCTAAGCTAGAGGTCCGGGGTTGATGCCCGTTGGTAGTTGAAGTACTGCAGCGAACGGGAAAGATACAGATAT
CCCGCTATCAGGTTCACTTC

Downstream 100 bases:

>100_bases
CTCCTGCAACATCTGGCGTAAAGACTGTCGCCAATGGGGGGCAGGTTGCCCCAGGATGGGGGTAATTTTGCAATTGCTCA
AGACAGAATAGGCTGGCCTT

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MVLIRIPKPWQIESQPITSETAYWHRRRFLKNMIGFGIGATVFPSISCSRSDSEIEPDLQATLPQGQLPNVKRSPIYSGQ
GLTVTPEAKTSRYNNFYEFGGTKDIWQAAQALPTDPWKLEVTGLVNRPQTYDLDDLTQKFPLEERIYRFRCVEAWAMVVP
WLGFPMRSLLQDVEPKSNAKFVRFTSYYDPQVTPGPGGFTDSSGLPWPYTESLRIDEMAHDLAFFAVGIYGHLLPKQHGA
PIRMVTPWKYGFKGAKSIVKIEFMNFQPPTFWNTLAPDEYGFEANVNPNIPHPRWSQAEERLIGTGVHPAVWERQPTLIY
NGYPEVAPLYGGVLN

Sequences:

>Translated_335_residues
MVLIRIPKPWQIESQPITSETAYWHRRRFLKNMIGFGIGATVFPSISCSRSDSEIEPDLQATLPQGQLPNVKRSPIYSGQ
GLTVTPEAKTSRYNNFYEFGGTKDIWQAAQALPTDPWKLEVTGLVNRPQTYDLDDLTQKFPLEERIYRFRCVEAWAMVVP
WLGFPMRSLLQDVEPKSNAKFVRFTSYYDPQVTPGPGGFTDSSGLPWPYTESLRIDEMAHDLAFFAVGIYGHLLPKQHGA
PIRMVTPWKYGFKGAKSIVKIEFMNFQPPTFWNTLAPDEYGFEANVNPNIPHPRWSQAEERLIGTGVHPAVWERQPTLIY
NGYPEVAPLYGGVLN
>Mature_335_residues
MVLIRIPKPWQIESQPITSETAYWHRRRFLKNMIGFGIGATVFPSISCSRSDSEIEPDLQATLPQGQLPNVKRSPIYSGQ
GLTVTPEAKTSRYNNFYEFGGTKDIWQAAQALPTDPWKLEVTGLVNRPQTYDLDDLTQKFPLEERIYRFRCVEAWAMVVP
WLGFPMRSLLQDVEPKSNAKFVRFTSYYDPQVTPGPGGFTDSSGLPWPYTESLRIDEMAHDLAFFAVGIYGHLLPKQHGA
PIRMVTPWKYGFKGAKSIVKIEFMNFQPPTFWNTLAPDEYGFEANVNPNIPHPRWSQAEERLIGTGVHPAVWERQPTLIY
NGYPEVAPLYGGVLN

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=324, Percent_Identity=48.4567901234568, Blast_Score=298, Evalue=2e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 38131; Mature: 38131

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLIRIPKPWQIESQPITSETAYWHRRRFLKNMIGFGIGATVFPSISCSRSDSEIEPDLQ
CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCHH
ATLPQGQLPNVKRSPIYSGQGLTVTPEAKTSRYNNFYEFGGTKDIWQAAQALPTDPWKLE
HCCCCCCCCCCCCCCEECCCCEEECCCHHHHHCCCHHHCCCCHHHHHHHHHCCCCCEEEE
VTGLVNRPQTYDLDDLTQKFPLEERIYRFRCVEAWAMVVPWLGFPMRSLLQDVEPKSNAK
EEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
FVRFTSYYDPQVTPGPGGFTDSSGLPWPYTESLRIDEMAHDLAFFAVGIYGHLLPKQHGA
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PIRMVTPWKYGFKGAKSIVKIEFMNFQPPTFWNTLAPDEYGFEANVNPNIPHPRWSQAEE
CEEEECCCHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
RLIGTGVHPAVWERQPTLIYNGYPEVAPLYGGVLN
HHHCCCCCHHHHCCCCCEEECCCCCHHHHCCCCCC
>Mature Secondary Structure
MVLIRIPKPWQIESQPITSETAYWHRRRFLKNMIGFGIGATVFPSISCSRSDSEIEPDLQ
CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCHH
ATLPQGQLPNVKRSPIYSGQGLTVTPEAKTSRYNNFYEFGGTKDIWQAAQALPTDPWKLE
HCCCCCCCCCCCCCCEECCCCEEECCCHHHHHCCCHHHCCCCHHHHHHHHHCCCCCEEEE
VTGLVNRPQTYDLDDLTQKFPLEERIYRFRCVEAWAMVVPWLGFPMRSLLQDVEPKSNAK
EEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
FVRFTSYYDPQVTPGPGGFTDSSGLPWPYTESLRIDEMAHDLAFFAVGIYGHLLPKQHGA
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PIRMVTPWKYGFKGAKSIVKIEFMNFQPPTFWNTLAPDEYGFEANVNPNIPHPRWSQAEE
CEEEECCCHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
RLIGTGVHPAVWERQPTLIYNGYPEVAPLYGGVLN
HHHCCCCCHHHHCCCCCEEECCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA