| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is yitJ [H]
Identifier: 158333977
GI number: 158333977
Start: 771168
End: 772130
Strand: Reverse
Name: yitJ [H]
Synonym: AM1_0791
Alternate gene names: 158333977
Gene position: 772130-771168 (Counterclockwise)
Preceding gene: 158333978
Following gene: 158333976
Centisome position: 11.87
GC content: 48.81
Gene sequence:
>963_bases ATGACCTCTCCTATTGCTCCTGTTCATGATCTATCTGAACAGCTATCCTCCCCGATTGCACATCGATTCCAGGCTGCAAT TCATGCTGGAGAGTTTTTAGTGACCGCAGAGGTGATGCCTCCTAAAGGTGGTTCCATCCAGCATATGCTGGACCAGGCCC TCCACCTCAAAGATTGGGTTCATGCAGTTAATATTACTGACGGTAGTCGAGCAGTTCTTAGAATGAGCTCTTTAGCCGTT GCTGCTATCTTGCGGCAGCAGGGAATTGAACCGATTTGTCAGATGGCCTGCCGTGATCGCAACCGGATTGCCCTCCAAGC TGATCTAATGGGAGCCCATGCCTTGGGGATTCACAACATCTTGGCCCTGACGGGAGATCCCATCAAGGCAGGAGATTTCC CTAAAGCAAAAGGGGTGTTTGATCTAGAGTCCATTCGCTTGTTGAACATCATTCGACAGCTCAACAATGGCTTGGATGGA AATGAGAAACCTCTTCCTGATGGCCCAACCCACCTCTTAGTGGGTGCCGCTGTAGATCCGCAATTGGCGAGCTGGTCAGG GTTACAAAGCCGATTTGAGAAGAAAGTGATGGCGGGGGCTGAATTTTTCCAAAGTCAATTAATCGTTGACTTTGATCGCC TGGAAAAATTTATGACAGAAATTGCGACCCCTGCCAAAAAACCGATCTTGGCAGGGATTTTTCTGCTTAAATCTGCCAAG AATGCCCAATTTATTAATCGCTGTGTTCCTGGGGTTAATATTCCAGATGCCATCATCAACCGTTTGGATAAAGCCACCGA TCCGCTGCAAGAAGGAATTGCGATCGCATCTGAGCAAGTCCAACAGGCCCGTCAACTCTGCCAGGGGGTCCATATGATGG CGGTCCGTCGAGAAGACTTGATTCCTCAAATACTGGAGCAGGCAGGCGTTACACCTGTAAGACAAACTCAAACCATCTCA TGA
Upstream 100 bases:
>100_bases AGTATTGAAACTGATTTAAATTTTTTTCATACCTATTTATTTTTCATACCTGTTTTTTTAGGTATAAAGACACCCTTTAT TGCTAACCTGTGAATCTTTT
Downstream 100 bases:
>100_bases GTTTTTGCCATTTAGAGTGCCAATAGAAGTAGCTTCAACGTTTTTCGTTTTTCTCCGTTGGTTACAATGGCATTACTCTG AGCTAGCATTCTGTATGATT
Product: methylenetetrahydrofolate reductase
Products: NA
Alternate protein names: Homocysteine S-methyltransferase; S-methylmethionine:homocysteine methyltransferase; 5,10-methylenetetrahydrofolate reductase [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MTSPIAPVHDLSEQLSSPIAHRFQAAIHAGEFLVTAEVMPPKGGSIQHMLDQALHLKDWVHAVNITDGSRAVLRMSSLAV AAILRQQGIEPICQMACRDRNRIALQADLMGAHALGIHNILALTGDPIKAGDFPKAKGVFDLESIRLLNIIRQLNNGLDG NEKPLPDGPTHLLVGAAVDPQLASWSGLQSRFEKKVMAGAEFFQSQLIVDFDRLEKFMTEIATPAKKPILAGIFLLKSAK NAQFINRCVPGVNIPDAIINRLDKATDPLQEGIAIASEQVQQARQLCQGVHMMAVRREDLIPQILEQAGVTPVRQTQTIS
Sequences:
>Translated_320_residues MTSPIAPVHDLSEQLSSPIAHRFQAAIHAGEFLVTAEVMPPKGGSIQHMLDQALHLKDWVHAVNITDGSRAVLRMSSLAV AAILRQQGIEPICQMACRDRNRIALQADLMGAHALGIHNILALTGDPIKAGDFPKAKGVFDLESIRLLNIIRQLNNGLDG NEKPLPDGPTHLLVGAAVDPQLASWSGLQSRFEKKVMAGAEFFQSQLIVDFDRLEKFMTEIATPAKKPILAGIFLLKSAK NAQFINRCVPGVNIPDAIINRLDKATDPLQEGIAIASEQVQQARQLCQGVHMMAVRREDLIPQILEQAGVTPVRQTQTIS >Mature_319_residues TSPIAPVHDLSEQLSSPIAHRFQAAIHAGEFLVTAEVMPPKGGSIQHMLDQALHLKDWVHAVNITDGSRAVLRMSSLAVA AILRQQGIEPICQMACRDRNRIALQADLMGAHALGIHNILALTGDPIKAGDFPKAKGVFDLESIRLLNIIRQLNNGLDGN EKPLPDGPTHLLVGAAVDPQLASWSGLQSRFEKKVMAGAEFFQSQLIVDFDRLEKFMTEIATPAKKPILAGIFLLKSAKN AQFINRCVPGVNIPDAIINRLDKATDPLQEGIAIASEQVQQARQLCQGVHMMAVRREDLIPQILEQAGVTPVRQTQTIS
Specific function: Unknown
COG id: COG0685
COG function: function code E; 5,10-methylenetetrahydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Hcy-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003171 - InterPro: IPR003726 [H]
Pfam domain/function: PF02219 MTHFR; PF02574 S-methyl_trans [H]
EC number: =2.1.1.10; =1.5.1.20 [H]
Molecular weight: Translated: 34843; Mature: 34712
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPIAPVHDLSEQLSSPIAHRFQAAIHAGEFLVTAEVMPPKGGSIQHMLDQALHLKDWV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH HAVNITDGSRAVLRMSSLAVAAILRQQGIEPICQMACRDRNRIALQADLMGAHALGIHNI HEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH LALTGDPIKAGDFPKAKGVFDLESIRLLNIIRQLNNGLDGNEKPLPDGPTHLLVGAAVDP HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCC QLASWSGLQSRFEKKVMAGAEFFQSQLIVDFDRLEKFMTEIATPAKKPILAGIFLLKSAK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC NAQFINRCVPGVNIPDAIINRLDKATDPLQEGIAIASEQVQQARQLCQGVHMMAVRREDL CHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPQILEQAGVTPVRQTQTIS HHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TSPIAPVHDLSEQLSSPIAHRFQAAIHAGEFLVTAEVMPPKGGSIQHMLDQALHLKDWV CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH HAVNITDGSRAVLRMSSLAVAAILRQQGIEPICQMACRDRNRIALQADLMGAHALGIHNI HEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH LALTGDPIKAGDFPKAKGVFDLESIRLLNIIRQLNNGLDGNEKPLPDGPTHLLVGAAVDP HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCC QLASWSGLQSRFEKKVMAGAEFFQSQLIVDFDRLEKFMTEIATPAKKPILAGIFLLKSAK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC NAQFINRCVPGVNIPDAIINRLDKATDPLQEGIAIASEQVQQARQLCQGVHMMAVRREDL CHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPQILEQAGVTPVRQTQTIS HHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377 [H]