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The map label for this gene is yjcF [C]

Identifier: 158333973

GI number: 158333973

Start: 765487

End: 766056

Strand: Direct

Name: yjcF [C]

Synonym: AM1_0787

Alternate gene names: 158333973

Gene position: 765487-766056 (Clockwise)

Preceding gene: 158333972

Following gene: 158333974

Centisome position: 11.77

GC content: 45.44

Gene sequence:

>570_bases
ATGACGGCAGAGGAACTGATGGAGCGATATGCTTCTGGAGAGAGAGATTTCACTGGCATTGAACTCCAATATGTCCGATT
GAATAGAGTCGTTTTGAGTGGTGCCAACTTCAATGGAGCTAATTTGAGAGGAATCTTTCTCGTCGATTCTGATCTGGCAG
GATCGACCCTGAGACAGGCAAACTTAGTAGATTCAACATTGACCAACGTAAACTTCCAAAATGCTGATCTGACAGAAGCC
GATTTATCTTGTGCCGATTTGGATCACTCCATTTTAAGGGAGGCAACCTTGGTTGGTGCTCAAATTTACCAAGCCTCTTT
AAGAGGAGCCTGTCTCGCTTATGCCAACTTGAGAGGGGCTGATATGGGACAAGCTGGAGTGGATGGGGCTGACTTTACTC
ATGCAGATTTGCGAGATGCTTTTCTCAAAGAAGTTGCCTTTGAAGCTGACCTCTCATATGCCGATTTCAGAGGAGCTGAA
ACTTGGGATAATATCGAAGCTATCTTCACACCGGGCATTCTCTGTAACACCTTATTGCCTGACGGGCGTATCAGAAATGA
TGACTGTTGA

Upstream 100 bases:

>100_bases
ATGTATTGAGTTTGCCAAGTTGAGATAAATATTTTATGCAATCATCAGCTATTCTGCTTCATGATTTTATGAAGGACTTT
TTTGCATAGAAGGTTGAGGT

Downstream 100 bases:

>100_bases
TTGCCATCGTGCAAAAGACAGGCAATAAGAAAATGCTACAAACCCCCGATTTTACTGGAAGTTTGGCAGCACCCTCCAAA
TCGGCTTTTTTCTGGCCATG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTAEELMERYASGERDFTGIELQYVRLNRVVLSGANFNGANLRGIFLVDSDLAGSTLRQANLVDSTLTNVNFQNADLTEA
DLSCADLDHSILREATLVGAQIYQASLRGACLAYANLRGADMGQAGVDGADFTHADLRDAFLKEVAFEADLSYADFRGAE
TWDNIEAIFTPGILCNTLLPDGRIRNDDC

Sequences:

>Translated_189_residues
MTAEELMERYASGERDFTGIELQYVRLNRVVLSGANFNGANLRGIFLVDSDLAGSTLRQANLVDSTLTNVNFQNADLTEA
DLSCADLDHSILREATLVGAQIYQASLRGACLAYANLRGADMGQAGVDGADFTHADLRDAFLKEVAFEADLSYADFRGAE
TWDNIEAIFTPGILCNTLLPDGRIRNDDC
>Mature_188_residues
TAEELMERYASGERDFTGIELQYVRLNRVVLSGANFNGANLRGIFLVDSDLAGSTLRQANLVDSTLTNVNFQNADLTEAD
LSCADLDHSILREATLVGAQIYQASLRGACLAYANLRGADMGQAGVDGADFTHADLRDAFLKEVAFEADLSYADFRGAET
WDNIEAIFTPGILCNTLLPDGRIRNDDC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 20565; Mature: 20434

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEELMERYASGERDFTGIELQYVRLNRVVLSGANFNGANLRGIFLVDSDLAGSTLRQA
CCHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCHHHHH
NLVDSTLTNVNFQNADLTEADLSCADLDHSILREATLVGAQIYQASLRGACLAYANLRGA
HHHHHHHHCCCCCCCCCCHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCC
DMGQAGVDGADFTHADLRDAFLKEVAFEADLSYADFRGAETWDNIEAIFTPGILCNTLLP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEECCCHHHHHCCC
DGRIRNDDC
CCCCCCCCC
>Mature Secondary Structure 
TAEELMERYASGERDFTGIELQYVRLNRVVLSGANFNGANLRGIFLVDSDLAGSTLRQA
CHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCHHHHH
NLVDSTLTNVNFQNADLTEADLSCADLDHSILREATLVGAQIYQASLRGACLAYANLRGA
HHHHHHHHCCCCCCCCCCHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCC
DMGQAGVDGADFTHADLRDAFLKEVAFEADLSYADFRGAETWDNIEAIFTPGILCNTLLP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEECCCHHHHHCCC
DGRIRNDDC
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]