| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is aspH
Identifier: 158333910
GI number: 158333910
Start: 706573
End: 707304
Strand: Direct
Name: aspH
Synonym: AM1_0722
Alternate gene names: NA
Gene position: 706573-707304 (Clockwise)
Preceding gene: 158333909
Following gene: 158333911
Centisome position: 10.86
GC content: 50.68
Gene sequence:
>732_bases GTGAAAGAATTTCTCGAAACTTTAATGCGTCAGCATATTGGGGGTTTGGTTTCGCGTTCGTCCCTCGTGGGCCACCAAAC CTTCTTTGACCCCAGTATCTTTAACTGGATTCCGCTTTTGGAAAAAAACTGGCGCACCATTCGCCAGGAACTAGAACAGG TTCTCCAATATAAAGAGGCATTGCCCAATTTTGAAGAATTGGTGGAGTACGATGCCGACCTCACCAAAGATACCCAGTGG AAAATGTTCGCCTTCTACGCCTATGGGATTAAGGCCGAAAAAAATTGTGATCGCTGCCCGGAAACCACCCGGCTGATCGA ACAAATCCCCGGGTTAAAAACCGCTTTTTTCTCGATCTTGCTGCCTCACCAGCGCATCCCCCCCCACCGAGGCCCTTATA ACGGAGTGCTGCGTTATCACCTCGGCCTGATGGTCCCAGAGGCCACGGACCAATGCGGCATCCGCGTTGGCAAGGATATT CGCCATTGGCAAGAAGGCCAAAGCCTCGTCTTTGATGATTCCTTCGAACATACGGCCTGGAACGACACGGATAGTGTCCG CGTCGTCCTGTTTTTGGATGTGGTCCGACCCGTCAAATTTCCTATTTCTCTGTTGAATCAAGCCGTGATTCAGCTCTTTT CTTTGTCCCCCTATATTCAAGGCGCAGCCGCCAATCAAAAGAAGTGGGACAAGCGATTGGATGCCGTATTGGCAGCGAAA GGGACCCAATAG
Upstream 100 bases:
>100_bases TGCCATTATGAAATCCCACTAATCCAATTCTGGTGTCTGGCTCAGGCATCAAGATTAAGGATTTATTAATATAGTCAACA CATGATTGGAAGATAGTCCC
Downstream 100 bases:
>100_bases CGCCGTGACAGATCATGGTGTACATTGGCTGGAGTGTTAATGCGCCCGATTGTTGATTTCTAAGCCCTAACTTATGAGTG CATTGAGCCAGTTTTACACC
Product: aspartyl/asparaginyl beta-hydroxylase
Products: NA
Alternate protein names: Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Membrane-Bound Beta-Hydroxylase; Peptide-Aspartate Beta-Dioxygenase; Lipid A-Myristate Beta-Hydroxylase; Aspartyl-Asparaginyl Beta-Hydroxylase; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Peptide Aspartate B-Dioxygenase; Aspartyl/Asparaginyl-Beta-Hydroxylase; Hydroxylase; Peptide-Aspartate B-Dioxygenase; Aspartate Beta-Hydroxylase; Lipopolysaccharide Biosynthetic Protein; Fe(2+)/Alpha-Ketoglutarate-Dependent Dioxygenase LpxO; Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family Protein
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKEFLETLMRQHIGGLVSRSSLVGHQTFFDPSIFNWIPLLEKNWRTIRQELEQVLQYKEALPNFEELVEYDADLTKDTQW KMFAFYAYGIKAEKNCDRCPETTRLIEQIPGLKTAFFSILLPHQRIPPHRGPYNGVLRYHLGLMVPEATDQCGIRVGKDI RHWQEGQSLVFDDSFEHTAWNDTDSVRVVLFLDVVRPVKFPISLLNQAVIQLFSLSPYIQGAAANQKKWDKRLDAVLAAK GTQ
Sequences:
>Translated_243_residues MKEFLETLMRQHIGGLVSRSSLVGHQTFFDPSIFNWIPLLEKNWRTIRQELEQVLQYKEALPNFEELVEYDADLTKDTQW KMFAFYAYGIKAEKNCDRCPETTRLIEQIPGLKTAFFSILLPHQRIPPHRGPYNGVLRYHLGLMVPEATDQCGIRVGKDI RHWQEGQSLVFDDSFEHTAWNDTDSVRVVLFLDVVRPVKFPISLLNQAVIQLFSLSPYIQGAAANQKKWDKRLDAVLAAK GTQ >Mature_243_residues MKEFLETLMRQHIGGLVSRSSLVGHQTFFDPSIFNWIPLLEKNWRTIRQELEQVLQYKEALPNFEELVEYDADLTKDTQW KMFAFYAYGIKAEKNCDRCPETTRLIEQIPGLKTAFFSILLPHQRIPPHRGPYNGVLRYHLGLMVPEATDQCGIRVGKDI RHWQEGQSLVFDDSFEHTAWNDTDSVRVVLFLDVVRPVKFPISLLNQAVIQLFSLSPYIQGAAANQKKWDKRLDAVLAAK GTQ
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI14589866, Length=167, Percent_Identity=35.3293413173653, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI258613943, Length=167, Percent_Identity=35.3293413173653, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI194328779, Length=170, Percent_Identity=33.5294117647059, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI38708313, Length=122, Percent_Identity=35.2459016393443, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI193210573, Length=194, Percent_Identity=29.8969072164948, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17568771, Length=194, Percent_Identity=29.8969072164948, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193210571, Length=194, Percent_Identity=29.8969072164948, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24654024, Length=181, Percent_Identity=35.9116022099448, Blast_Score=102, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28092; Mature: 28092
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEFLETLMRQHIGGLVSRSSLVGHQTFFDPSIFNWIPLLEKNWRTIRQELEQVLQYKEA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPNFEELVEYDADLTKDTQWKMFAFYAYGIKAEKNCDRCPETTRLIEQIPGLKTAFFSIL CCCHHHHHHHCCCCCCCCCHHEEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH LPHQRIPPHRGPYNGVLRYHLGLMVPEATDQCGIRVGKDIRHWQEGQSLVFDDSFEHTAW CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCHHHHHHHCCCCEEECCCCCCCCC NDTDSVRVVLFLDVVRPVKFPISLLNQAVIQLFSLSPYIQGAAANQKKWDKRLDAVLAAK CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHCC GTQ CCC >Mature Secondary Structure MKEFLETLMRQHIGGLVSRSSLVGHQTFFDPSIFNWIPLLEKNWRTIRQELEQVLQYKEA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPNFEELVEYDADLTKDTQWKMFAFYAYGIKAEKNCDRCPETTRLIEQIPGLKTAFFSIL CCCHHHHHHHCCCCCCCCCHHEEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH LPHQRIPPHRGPYNGVLRYHLGLMVPEATDQCGIRVGKDIRHWQEGQSLVFDDSFEHTAW CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCHHHHHHHCCCCEEECCCCCCCCC NDTDSVRVVLFLDVVRPVKFPISLLNQAVIQLFSLSPYIQGAAANQKKWDKRLDAVLAAK CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHCC GTQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA