| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333827
Identifier: 158333827
GI number: 158333827
Start: 623376
End: 623777
Strand: Reverse
Name: 158333827
Synonym: AM1_0636
Alternate gene names: NA
Gene position: 623777-623376 (Counterclockwise)
Preceding gene: 158333829
Following gene: 158333823
Centisome position: 9.59
GC content: 44.78
Gene sequence:
>402_bases ATGTTTAAGACGATTTTGTTTCCAATTGATCAAAGTCGAGCTTCTCAAGATGCTGCTGAGAAGGTAGCCGAAATCGTGAA ATTTTGCGATAGCAAACTCATCATCCTGTCAGTACAATCAGATGCTGAGAACACTCCCGAAAACAGCACCCCTGACAACC AAGCGATTGACCAACTCCTCCAAAATGCAAAAATTGCTTTTTCAGATTGGGGGATTGCCGCTGAAATCACGAAGCTGGAA GGCAGACCGGCCTTTTGCATTTGTGATTATGCCGATGAAATTAATGCAGATCTAATTGTTATGGGTTGCCGAGGCGTTGG CCTTACTGAAGAAGGGGCCGCAGAAAGCGTCAGTAATCGAGTGATTAATTTAGCCCCTTGCCCTGTCATGGTTATTCCTT AG
Upstream 100 bases:
>100_bases TAAATCTATACCCAAACTCGTCGGTCGGGTTGGTTGTTAATGTGAACTGATACCGTGCCGTGAATATTTTACCGGAGTCC GTACCCTGGAGTTGAGCTTC
Downstream 100 bases:
>100_bases GTGAAGGCGTCCTTCTCTAAGAATGGCCACACAACACCATCTCAGATGCCCTGTCTCGATTATTGCTGAGTCAATTCCAG GATTACATCACATCGATAAT
Product: universal stress protein
Products: NA
Alternate protein names: USP Sll1654 [H]
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MFKTILFPIDQSRASQDAAEKVAEIVKFCDSKLIILSVQSDAENTPENSTPDNQAIDQLLQNAKIAFSDWGIAAEITKLE GRPAFCICDYADEINADLIVMGCRGVGLTEEGAAESVSNRVINLAPCPVMVIP
Sequences:
>Translated_133_residues MFKTILFPIDQSRASQDAAEKVAEIVKFCDSKLIILSVQSDAENTPENSTPDNQAIDQLLQNAKIAFSDWGIAAEITKLE GRPAFCICDYADEINADLIVMGCRGVGLTEEGAAESVSNRVINLAPCPVMVIP >Mature_133_residues MFKTILFPIDQSRASQDAAEKVAEIVKFCDSKLIILSVQSDAENTPENSTPDNQAIDQLLQNAKIAFSDWGIAAEITKLE GRPAFCICDYADEINADLIVMGCRGVGLTEEGAAESVSNRVINLAPCPVMVIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 14359; Mature: 14359
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKTILFPIDQSRASQDAAEKVAEIVKFCDSKLIILSVQSDAENTPENSTPDNQAIDQLL CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH QNAKIAFSDWGIAAEITKLEGRPAFCICDYADEINADLIVMGCRGVGLTEEGAAESVSNR HCCEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHCC VINLAPCPVMVIP EEEECCCCEEEEC >Mature Secondary Structure MFKTILFPIDQSRASQDAAEKVAEIVKFCDSKLIILSVQSDAENTPENSTPDNQAIDQLL CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH QNAKIAFSDWGIAAEITKLEGRPAFCICDYADEINADLIVMGCRGVGLTEEGAAESVSNR HCCEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHCC VINLAPCPVMVIP EEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]