| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333743
Identifier: 158333743
GI number: 158333743
Start: 536823
End: 537545
Strand: Reverse
Name: 158333743
Synonym: AM1_0551
Alternate gene names: NA
Gene position: 537545-536823 (Counterclockwise)
Preceding gene: 158333745
Following gene: 158333742
Centisome position: 8.27
GC content: 50.07
Gene sequence:
>723_bases ATGAAATTTAAGTCTATGGTGGCTGTGCCCGTAACAGCAGTGCTCGTAGTCACCACCACGATGCCGACCATGGCCGCGAC AGATGTCGAAAAGCAGGCCCATGCCGAAAAAATTATTTACTCTTCTCAAAATGTCTTAGAAGAAATTCTCAGTGATCCCA AGACTCAAATTCCTTCAGAGCTGCTAGAACAAAGCGAAGGTATTGCTATCTTTCCCGGTGTCATCCAAGCGGGGTTCCTG TTTGGCGCTCGCCGAGGCACAGGGGTGATGATGCTCCGGCAAGAAGATGGCACCTGGAGTAACCCTGCATTTATCAACAT CACGGGGGGTAGTTTTGGTCTCCAAATTGGGGCTAAATCCAGCGATATTGTCTTGGTGTTCCCCAACCGCAGCACGGTCA ATGAAGTACTTTCCAAATCTTTCGATATCGGCGGTAGTGTCTCAGGGACGGCTGGCCCCGTGGGGGCAACAGCGGTTGAT CCCACCGAAGATTACAGCAAGTCACCGATTCTGACCTATGCCCGCAGTAGTGGTCTATTTGGTGGGGTCGCCATTGATGG CTCTAAGCTAGGGTTCAACAAAGGGAAAAATCGTGATTTATATGGCAAATCCATTACCCCACGCCGAATTTTTAGAGATC CAGATGTAGAGGCTCCTGTGGTGGTTGATTCTCTCCGCCAGGTATTGGAAGAGTCTGAGTTAGGGACCTTTAGCCGCTTC TAG
Upstream 100 bases:
>100_bases TCCCAATTTCGGCACCATTTAGATGGATGAAACGGCTGAAACTTTCCGGTAAACCCAGGGTCATTACCCATATGCTCGTC TTGTCTAGGGAGAGATAGCG
Downstream 100 bases:
>100_bases CTTCTCTATTGATGCAGCGACTGCAATTGGGATTAGCTTCCCTTGTCCTACTGGGTGCTCTGGGGATTGGGGTTAATCGT TGGCAGCGATCGCAACCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKFKSMVAVPVTAVLVVTTTMPTMAATDVEKQAHAEKIIYSSQNVLEEILSDPKTQIPSELLEQSEGIAIFPGVIQAGFL FGARRGTGVMMLRQEDGTWSNPAFINITGGSFGLQIGAKSSDIVLVFPNRSTVNEVLSKSFDIGGSVSGTAGPVGATAVD PTEDYSKSPILTYARSSGLFGGVAIDGSKLGFNKGKNRDLYGKSITPRRIFRDPDVEAPVVVDSLRQVLEESELGTFSRF
Sequences:
>Translated_240_residues MKFKSMVAVPVTAVLVVTTTMPTMAATDVEKQAHAEKIIYSSQNVLEEILSDPKTQIPSELLEQSEGIAIFPGVIQAGFL FGARRGTGVMMLRQEDGTWSNPAFINITGGSFGLQIGAKSSDIVLVFPNRSTVNEVLSKSFDIGGSVSGTAGPVGATAVD PTEDYSKSPILTYARSSGLFGGVAIDGSKLGFNKGKNRDLYGKSITPRRIFRDPDVEAPVVVDSLRQVLEESELGTFSRF >Mature_240_residues MKFKSMVAVPVTAVLVVTTTMPTMAATDVEKQAHAEKIIYSSQNVLEEILSDPKTQIPSELLEQSEGIAIFPGVIQAGFL FGARRGTGVMMLRQEDGTWSNPAFINITGGSFGLQIGAKSSDIVLVFPNRSTVNEVLSKSFDIGGSVSGTAGPVGATAVD PTEDYSKSPILTYARSSGLFGGVAIDGSKLGFNKGKNRDLYGKSITPRRIFRDPDVEAPVVVDSLRQVLEESELGTFSRF
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI227430338, Length=180, Percent_Identity=33.8888888888889, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI227430336, Length=180, Percent_Identity=33.8888888888889, Blast_Score=89, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6321804, Length=177, Percent_Identity=34.4632768361582, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6321137, Length=182, Percent_Identity=35.1648351648352, Blast_Score=82, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25626; Mature: 25626
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKSMVAVPVTAVLVVTTTMPTMAATDVEKQAHAEKIIYSSQNVLEEILSDPKTQIPSE CCCHHHHHHHHHEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCHHH LLEQSEGIAIFPGVIQAGFLFGARRGTGVMMLRQEDGTWSNPAFINITGGSFGLQIGAKS HHHHCCCEEEEHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECCCEEEEECCCC SDIVLVFPNRSTVNEVLSKSFDIGGSVSGTAGPVGATAVDPTEDYSKSPILTYARSSGLF CCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE GGVAIDGSKLGFNKGKNRDLYGKSITPRRIFRDPDVEAPVVVDSLRQVLEESELGTFSRF EEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKFKSMVAVPVTAVLVVTTTMPTMAATDVEKQAHAEKIIYSSQNVLEEILSDPKTQIPSE CCCHHHHHHHHHEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCHHH LLEQSEGIAIFPGVIQAGFLFGARRGTGVMMLRQEDGTWSNPAFINITGGSFGLQIGAKS HHHHCCCEEEEHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECCCEEEEECCCC SDIVLVFPNRSTVNEVLSKSFDIGGSVSGTAGPVGATAVDPTEDYSKSPILTYARSSGLF CCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE GGVAIDGSKLGFNKGKNRDLYGKSITPRRIFRDPDVEAPVVVDSLRQVLEESELGTFSRF EEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA