| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158333736
Identifier: 158333736
GI number: 158333736
Start: 524745
End: 526202
Strand: Reverse
Name: 158333736
Synonym: AM1_0544
Alternate gene names: NA
Gene position: 526202-524745 (Counterclockwise)
Preceding gene: 158333737
Following gene: 158333735
Centisome position: 8.09
GC content: 47.67
Gene sequence:
>1458_bases TTGTCAGCCTCTCTATCTCGATTAGGGCAGCCATCCTATCTAGCTCTGAACAGACTGGGAAATGAACCTAATAAGGGATT TGCCTTGCCCCTAGCCCTAGGACTGGGTTTTGTGATGGTCATTTTAGGGTTGTCGACAATCATGATTGCCCAAAGCGATC GCACCTCCGCATTTAGCCGCAAAGAAGCTGGGGCTAGTTTAGCCGTGTCGGAAGGGGGCATGGCTCGCATGCTGTCCCAA ATGACTCAGCCGAATAATCGAATTTTATTGACTCGAAGCTACGATACGATCAATCCCAAAACTGGAACCACCTATCTTGG TCCTGATGGCATTCTCAATTCTGGGGATGAAGAAACCACGGCTATTGACGAATGGACGGGATATACAGGCAGCACTTCAT CTCCGTGTGAGGATACTGGGACGACCATCACTCCTAGTGTTACTACTTCAGGAAACATGGGTTCTGGCGGTCAATACCAA CTCAAAGCCTATCGGTATAATCCAACGGAACAAACGGGGACCCTGCTTATTGAAGGTAAGCAGGGAGAACGAGTATCTTA TGTGCTATCTACCCTGTCTATACAGTCCGAAGTAGAGAATTTTCCTGGTGTTCTGGCAATGGAAGGTGCTTACATTCGGG GACGCACCCTTATTGGTCAACATGCCAATCTTTACTTCGACCCGGCCTATTCTGTGGACAGCAGCCTGACGGATAAGTCA GCACCGAATGATGTTGATCGTTCTGCTTATCTCAATGCCATTTACTCAACTGCTACCGATGGTCCTGCTGAGGATTTAAT TGCCGGTAACATCGTAGGTTGCAAGGTTACACAAACACTTTCTGTCGATTTACCCTCAACTGTGAGGAGTTTAGGCAGCG TCAGGAGTAGTACCACTCTCACTGCTGCAGACAGCCCTTACCATATTGAAGAACTGGAACTGGATGGTACGAATGTGGTG AATGTGGACACGACAGATGGTCCAGTTTACCTTTACGTAACTAAATCCTTTGAATTGCGAGGCAATGCTCAACTGCGCAA CATTCGCACGGATGGGCAACTTCCACGAGTGGGGGATCTAAGGATTATTGTTCACAATGCAGTTGGTCCAAATCTCGCCA TCGAACTCTACGATCAATCCTGTATTGATACCGCATTTGTTTATAACACGGAGAATGATCTCCATTTACAAGGGACAGGA GACGGCTGTCCCAGTAGTGGAAATACTAATTTTGATGGCGTCGCTTGGGTAGAGGATGTCGTCAGTTCGATTAACATCAC CCCCCATACCCGCAGCGTACCTTCTGAAGATTTTGACATCATCACGACCAATGGCAGTACGTCCGGCATTAGAGTGCCCA ACGATGTATCCAGCTTGGCAGATGTGGTCAGTGGTATTGGCATTACTCCCAAGAATAAGTTTGGCTATGTGAAAAGTTGG CAACGGGTGAGGTTGTGA
Upstream 100 bases:
>100_bases ATTTTTCTATGCTCAATGATTGGCTTAGCCACTCCAATGGCAGTTGCTTTTTCATCCCTCTGACCGATCGTGGACAGGGG GTAAATCAATGAGCCCAAAG
Downstream 100 bases:
>100_bases CCAAGATGCCTTAATCCATTTCTTGTCAAAGTATGGGCAAGTCTCATAGGGGATGGGAAGTTTGTCCCCCCTGAAGCTGA AAGCCCTCTTTTATTTATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MSASLSRLGQPSYLALNRLGNEPNKGFALPLALGLGFVMVILGLSTIMIAQSDRTSAFSRKEAGASLAVSEGGMARMLSQ MTQPNNRILLTRSYDTINPKTGTTYLGPDGILNSGDEETTAIDEWTGYTGSTSSPCEDTGTTITPSVTTSGNMGSGGQYQ LKAYRYNPTEQTGTLLIEGKQGERVSYVLSTLSIQSEVENFPGVLAMEGAYIRGRTLIGQHANLYFDPAYSVDSSLTDKS APNDVDRSAYLNAIYSTATDGPAEDLIAGNIVGCKVTQTLSVDLPSTVRSLGSVRSSTTLTAADSPYHIEELELDGTNVV NVDTTDGPVYLYVTKSFELRGNAQLRNIRTDGQLPRVGDLRIIVHNAVGPNLAIELYDQSCIDTAFVYNTENDLHLQGTG DGCPSSGNTNFDGVAWVEDVVSSINITPHTRSVPSEDFDIITTNGSTSGIRVPNDVSSLADVVSGIGITPKNKFGYVKSW QRVRL
Sequences:
>Translated_485_residues MSASLSRLGQPSYLALNRLGNEPNKGFALPLALGLGFVMVILGLSTIMIAQSDRTSAFSRKEAGASLAVSEGGMARMLSQ MTQPNNRILLTRSYDTINPKTGTTYLGPDGILNSGDEETTAIDEWTGYTGSTSSPCEDTGTTITPSVTTSGNMGSGGQYQ LKAYRYNPTEQTGTLLIEGKQGERVSYVLSTLSIQSEVENFPGVLAMEGAYIRGRTLIGQHANLYFDPAYSVDSSLTDKS APNDVDRSAYLNAIYSTATDGPAEDLIAGNIVGCKVTQTLSVDLPSTVRSLGSVRSSTTLTAADSPYHIEELELDGTNVV NVDTTDGPVYLYVTKSFELRGNAQLRNIRTDGQLPRVGDLRIIVHNAVGPNLAIELYDQSCIDTAFVYNTENDLHLQGTG DGCPSSGNTNFDGVAWVEDVVSSINITPHTRSVPSEDFDIITTNGSTSGIRVPNDVSSLADVVSGIGITPKNKFGYVKSW QRVRL >Mature_484_residues SASLSRLGQPSYLALNRLGNEPNKGFALPLALGLGFVMVILGLSTIMIAQSDRTSAFSRKEAGASLAVSEGGMARMLSQM TQPNNRILLTRSYDTINPKTGTTYLGPDGILNSGDEETTAIDEWTGYTGSTSSPCEDTGTTITPSVTTSGNMGSGGQYQL KAYRYNPTEQTGTLLIEGKQGERVSYVLSTLSIQSEVENFPGVLAMEGAYIRGRTLIGQHANLYFDPAYSVDSSLTDKSA PNDVDRSAYLNAIYSTATDGPAEDLIAGNIVGCKVTQTLSVDLPSTVRSLGSVRSSTTLTAADSPYHIEELELDGTNVVN VDTTDGPVYLYVTKSFELRGNAQLRNIRTDGQLPRVGDLRIIVHNAVGPNLAIELYDQSCIDTAFVYNTENDLHLQGTGD GCPSSGNTNFDGVAWVEDVVSSINITPHTRSVPSEDFDIITTNGSTSGIRVPNDVSSLADVVSGIGITPKNKFGYVKSWQ RVRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51822; Mature: 51691
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASLSRLGQPSYLALNRLGNEPNKGFALPLALGLGFVMVILGLSTIMIAQSDRTSAFSR CCCCHHHCCCCCEEEHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHH KEAGASLAVSEGGMARMLSQMTQPNNRILLTRSYDTINPKTGTTYLGPDGILNSGDEETT HHCCCEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCE AIDEWTGYTGSTSSPCEDTGTTITPSVTTSGNMGSGGQYQLKAYRYNPTEQTGTLLIEGK EHHHCCCCCCCCCCCCCCCCCEECCCEECCCCCCCCCEEEEEEEEECCCCCCCEEEEECC QGERVSYVLSTLSIQSEVENFPGVLAMEGAYIRGRTLIGQHANLYFDPAYSVDSSLTDKS CCCCHHHHHHHHHHHHHHHHCCCEEEECCCEEECEEEECCCCCEEECCCCCCCCCCCCCC APNDVDRSAYLNAIYSTATDGPAEDLIAGNIVGCKVTQTLSVDLPSTVRSLGSVRSSTTL CCCCCCHHHHHHHHHHCCCCCCHHHHHCCCEEEEEEEEEEEECCHHHHHHHHCCCCCCEE TAADSPYHIEELELDGTNVVNVDTTDGPVYLYVTKSFELRGNAQLRNIRTDGQLPRVGDL EECCCCCEEEEEEECCCEEEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCE RIIVHNAVGPNLAIELYDQSCIDTAFVYNTENDLHLQGTGDGCPSSGNTNFDGVAWVEDV EEEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHH VSSINITPHTRSVPSEDFDIITTNGSTSGIRVPNDVSSLADVVSGIGITPKNKFGYVKSW HHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHCH QRVRL HHHCC >Mature Secondary Structure SASLSRLGQPSYLALNRLGNEPNKGFALPLALGLGFVMVILGLSTIMIAQSDRTSAFSR CCCHHHCCCCCEEEHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHH KEAGASLAVSEGGMARMLSQMTQPNNRILLTRSYDTINPKTGTTYLGPDGILNSGDEETT HHCCCEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCE AIDEWTGYTGSTSSPCEDTGTTITPSVTTSGNMGSGGQYQLKAYRYNPTEQTGTLLIEGK EHHHCCCCCCCCCCCCCCCCCEECCCEECCCCCCCCCEEEEEEEEECCCCCCCEEEEECC QGERVSYVLSTLSIQSEVENFPGVLAMEGAYIRGRTLIGQHANLYFDPAYSVDSSLTDKS CCCCHHHHHHHHHHHHHHHHCCCEEEECCCEEECEEEECCCCCEEECCCCCCCCCCCCCC APNDVDRSAYLNAIYSTATDGPAEDLIAGNIVGCKVTQTLSVDLPSTVRSLGSVRSSTTL CCCCCCHHHHHHHHHHCCCCCCHHHHHCCCEEEEEEEEEEEECCHHHHHHHHCCCCCCEE TAADSPYHIEELELDGTNVVNVDTTDGPVYLYVTKSFELRGNAQLRNIRTDGQLPRVGDL EECCCCCEEEEEEECCCEEEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCE RIIVHNAVGPNLAIELYDQSCIDTAFVYNTENDLHLQGTGDGCPSSGNTNFDGVAWVEDV EEEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHH VSSINITPHTRSVPSEDFDIITTNGSTSGIRVPNDVSSLADVVSGIGITPKNKFGYVKSW HHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHCH QRVRL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA