| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333675
Identifier: 158333675
GI number: 158333675
Start: 459007
End: 460308
Strand: Direct
Name: 158333675
Synonym: AM1_0479
Alternate gene names: NA
Gene position: 459007-460308 (Clockwise)
Preceding gene: 158333674
Following gene: 158333677
Centisome position: 7.06
GC content: 46.85
Gene sequence:
>1302_bases ATGACTGCAACTCAACCTGCTGCAGATACGACTGATCAATATTCCATCTCTCATCAAATCGTCATTGTTGGGGGTGGATC TGCTGGAATTACCGTCGCAGCTCAATTACTAAAGCAAATGCGGTCCCTCGATATTCTCATTATTGAGCCCTCTGAGCAGC ATTATTATCAACCCGGATGGACGCTAGTTGGGGGTGGCTGTATTTCCTTTGAGGCCACCGTTCAACCTCAGCAAACCCTT ATTCCACAGGATGCAACCTGGCTTCAAGATAAGGTCGTGCAGTTTGATCCTGATCAAAATTGCCTCCACACCCAAAATGG TACTCAGGTAACCTATGACTATCTGGTGGTTTGCCCTGGTATTCAGATCAATTGGAATCAGATCAAAGGGCTCCAAGAGG CGCTAGGCAAAGGAGAGGTATGTAGTAACTATGCTATCGGTGGCGCAACTCACACCTGGGAAACGATTAAACGGTTCCAG GGCGGAAACGCCATTTTCACGTATCCTGCAACCCCCATCAAGTGTGCAGGGGCTCCCCAAAAAATTATGTATCTTGCTGA TGAAGCCTTTGGGAAAAACGGCGTTCGAAAGAAAACCCAAATTAGCTATTGCACAGCAACCGGAAAAATCTTTGGCGTTG ATGCGTTTGTCCCCGCGTTGATGAAGGTTGTAGAGCGTAAAGGCATTGATCTAAGAACTCAGCATAATTTGACAGAAATT CGTCCAGATCAAAAAGTTGCCCTCTTTGCAGTTAGTAACGGCAACGAAACAGAAACGATCTCTTTGCCCTATGACATGAT TCATGTGACACCGCCCATGAGTGCTCCTGATGTGCTCAAGCACAGTCCGCTTGCGGTGGAAGGACCGGGAGGCTGGGTGG ATGTGGATAAATTCACAACCCAACATAATCGGTATCCAAATATTTTTAGCTTAGGGGATGCATCCTCGTTGCCCACCTCT AAAACGGCAGCCGCCATTCGCAGAGAAGCCCCTGTACTCGTGCAGAATTTGTTAGCCCATATGAATCAAACCCCATTGAT GGGTCAATACAATGGCTATAGTTGTTGCCCCCTCATCACCGGATATGACAAAACGATTCTGGCAGAGTTTGATTATGAGG CTCAACCTTATCCCAGTTTCCCCCTGGATGCGACCAAAGAACGCACGAGTATGTGGTTATTAAAACGCCATGTCTTGCCC TGGGTTTACTGGAATCGGATGCTTAAAGGAAAAGAACATGAGGGCAATTTTATCCGCCGCCTTCTTCCCAATACAGCTTT TGAGTTGAGTAAAAAAGCGTAA
Upstream 100 bases:
>100_bases TGAGTCAAAATTAGATTATTTAAATATTAATTAGCTCTCATAACTTGGAAAAATTTTTCCCAGATAATGCATGGGAGAAC AATCCAAGAGACCTAATGTA
Downstream 100 bases:
>100_bases TTACCGACGGCTATTTCATCAGAGTAGTTGAGTTTTGGTGCCTTGCCTCCAAAAGTCTACGGTATCTATTCGGAGGATTC TGGGGATTGACTTAATGCTG
Product: sulfide quinone oxidoreductase-like protein
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; SulfideQuinone Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase Flavoprotein Subunit; Twin-Arginine Translocation Pathway Signal; Sulfide Dehydrogenase; Sulfide-Quinone Reductase; Flavoprotein Reductase; Sulfide-Quinone Oxidoreductase; Dehydrogenase; NADH Dehydrogenase FAD-Containing Subunit; Sulfide Quinone Oxidoreductase-Like Protein; Pyridine Nucleotide-Disulfide Oxidoreductase; Anti-Anti-Sigma Regulatory Factor; Filamentous Hemagglutinin; NAD(Fad)-Dependent Dehydrogenase Protein; Oxidoreductase Family Protein; Flavoprotein Reductase-Like Protein; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Oxidoreductase Pyridine Nucleotide-Disulphide Family; Pyridine Nucleotide-Disulphide Oxidoreductase Class-II; Dehydrogenase/Reductase; Sulfide Quinone-Rductase; Sulphide Quinone Reductase; Flavoprotein Reductase Conjectural; Oxidoreductase FAD-Dependent; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; SulfideQuinone Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family; NAD(FAD)-Dependent Dehydrogenase-Like Protein; Sulfide Dehydrogenase Related Protein
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTATQPAADTTDQYSISHQIVIVGGGSAGITVAAQLLKQMRSLDILIIEPSEQHYYQPGWTLVGGGCISFEATVQPQQTL IPQDATWLQDKVVQFDPDQNCLHTQNGTQVTYDYLVVCPGIQINWNQIKGLQEALGKGEVCSNYAIGGATHTWETIKRFQ GGNAIFTYPATPIKCAGAPQKIMYLADEAFGKNGVRKKTQISYCTATGKIFGVDAFVPALMKVVERKGIDLRTQHNLTEI RPDQKVALFAVSNGNETETISLPYDMIHVTPPMSAPDVLKHSPLAVEGPGGWVDVDKFTTQHNRYPNIFSLGDASSLPTS KTAAAIRREAPVLVQNLLAHMNQTPLMGQYNGYSCCPLITGYDKTILAEFDYEAQPYPSFPLDATKERTSMWLLKRHVLP WVYWNRMLKGKEHEGNFIRRLLPNTAFELSKKA
Sequences:
>Translated_433_residues MTATQPAADTTDQYSISHQIVIVGGGSAGITVAAQLLKQMRSLDILIIEPSEQHYYQPGWTLVGGGCISFEATVQPQQTL IPQDATWLQDKVVQFDPDQNCLHTQNGTQVTYDYLVVCPGIQINWNQIKGLQEALGKGEVCSNYAIGGATHTWETIKRFQ GGNAIFTYPATPIKCAGAPQKIMYLADEAFGKNGVRKKTQISYCTATGKIFGVDAFVPALMKVVERKGIDLRTQHNLTEI RPDQKVALFAVSNGNETETISLPYDMIHVTPPMSAPDVLKHSPLAVEGPGGWVDVDKFTTQHNRYPNIFSLGDASSLPTS KTAAAIRREAPVLVQNLLAHMNQTPLMGQYNGYSCCPLITGYDKTILAEFDYEAQPYPSFPLDATKERTSMWLLKRHVLP WVYWNRMLKGKEHEGNFIRRLLPNTAFELSKKA >Mature_432_residues TATQPAADTTDQYSISHQIVIVGGGSAGITVAAQLLKQMRSLDILIIEPSEQHYYQPGWTLVGGGCISFEATVQPQQTLI PQDATWLQDKVVQFDPDQNCLHTQNGTQVTYDYLVVCPGIQINWNQIKGLQEALGKGEVCSNYAIGGATHTWETIKRFQG GNAIFTYPATPIKCAGAPQKIMYLADEAFGKNGVRKKTQISYCTATGKIFGVDAFVPALMKVVERKGIDLRTQHNLTEIR PDQKVALFAVSNGNETETISLPYDMIHVTPPMSAPDVLKHSPLAVEGPGGWVDVDKFTTQHNRYPNIFSLGDASSLPTSK TAAAIRREAPVLVQNLLAHMNQTPLMGQYNGYSCCPLITGYDKTILAEFDYEAQPYPSFPLDATKERTSMWLLKRHVLPW VYWNRMLKGKEHEGNFIRRLLPNTAFELSKKA
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI10864011, Length=407, Percent_Identity=45.4545454545455, Blast_Score=395, Evalue=1e-110, Organism=Caenorhabditis elegans, GI17539680, Length=429, Percent_Identity=34.2657342657343, Blast_Score=283, Evalue=1e-76, Organism=Caenorhabditis elegans, GI115534373, Length=362, Percent_Identity=37.8453038674033, Blast_Score=261, Evalue=6e-70, Organism=Drosophila melanogaster, GI24657386, Length=406, Percent_Identity=41.3793103448276, Blast_Score=339, Evalue=2e-93, Organism=Drosophila melanogaster, GI24657391, Length=406, Percent_Identity=41.3793103448276, Blast_Score=339, Evalue=2e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47951; Mature: 47820
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATQPAADTTDQYSISHQIVIVGGGSAGITVAAQLLKQMRSLDILIIEPSEQHYYQPGW CCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCHHCEECCCC TLVGGGCISFEATVQPQQTLIPQDATWLQDKVVQFDPDQNCLHTQNGTQVTYDYLVVCPG EEECCEEEEEEEECCHHHHCCCCCCHHHHCCCEEECCCCCCEECCCCCEEEEEEEEEECC IQINWNQIKGLQEALGKGEVCSNYAIGGATHTWETIKRFQGGNAIFTYPATPIKCAGAPQ CEEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCEEECCCCH KIMYLADEAFGKNGVRKKTQISYCTATGKIFGVDAFVPALMKVVERKGIDLRTQHNLTEI HEEEEEHHHHCCCCCCCCEEEEEEEECCEEEEHHHHHHHHHHHHHHCCCCEEECCCHHHC RPDQKVALFAVSNGNETETISLPYDMIHVTPPMSAPDVLKHSPLAVEGPGGWVDVDKFTT CCCCEEEEEEECCCCCCEEEECCEEEEEECCCCCCCHHHCCCCEEEECCCCEEEHHHHHH QHNRYPNIFSLGDASSLPTSKTAAAIRREAPVLVQNLLAHMNQTPLMGQYNGYSCCPLIT CCCCCCCEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEECEEEC GYDKTILAEFDYEAQPYPSFPLDATKERTSMWLLKRHVLPWVYWNRMLKGKEHEGNFIRR CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LLPNTAFELSKKA HCCCCHHHHCCCC >Mature Secondary Structure TATQPAADTTDQYSISHQIVIVGGGSAGITVAAQLLKQMRSLDILIIEPSEQHYYQPGW CCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCHHCEECCCC TLVGGGCISFEATVQPQQTLIPQDATWLQDKVVQFDPDQNCLHTQNGTQVTYDYLVVCPG EEECCEEEEEEEECCHHHHCCCCCCHHHHCCCEEECCCCCCEECCCCCEEEEEEEEEECC IQINWNQIKGLQEALGKGEVCSNYAIGGATHTWETIKRFQGGNAIFTYPATPIKCAGAPQ CEEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCEEECCCCH KIMYLADEAFGKNGVRKKTQISYCTATGKIFGVDAFVPALMKVVERKGIDLRTQHNLTEI HEEEEEHHHHCCCCCCCCEEEEEEEECCEEEEHHHHHHHHHHHHHHCCCCEEECCCHHHC RPDQKVALFAVSNGNETETISLPYDMIHVTPPMSAPDVLKHSPLAVEGPGGWVDVDKFTT CCCCEEEEEEECCCCCCEEEECCEEEEEECCCCCCCHHHCCCCEEEECCCCEEEHHHHHH QHNRYPNIFSLGDASSLPTSKTAAAIRREAPVLVQNLLAHMNQTPLMGQYNGYSCCPLIT CCCCCCCEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEECEEEC GYDKTILAEFDYEAQPYPSFPLDATKERTSMWLLKRHVLPWVYWNRMLKGKEHEGNFIRR CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LLPNTAFELSKKA HCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA