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The map label for this gene is yngJ [H]

Identifier: 158333600

GI number: 158333600

Start: 373470

End: 374531

Strand: Reverse

Name: yngJ [H]

Synonym: AM1_0401

Alternate gene names: 158333600

Gene position: 374531-373470 (Counterclockwise)

Preceding gene: 158333601

Following gene: 158333596

Centisome position: 5.76

GC content: 51.22

Gene sequence:

>1062_bases
ATGACGTTTCTTGAGCAGACTGAGGCATTTTTGCGAGGAGTGATTGCGCCGCAAGCAATGCAGATTGACCAGCATTCTGA
GTCTTTATTTCAGGCGCTGAAGGCGTTGGGAAATCAGGGACTGCTGGGGCTGCGTGTTCCCCAGGAATGGGGTGGACAAG
ATCTTGATGAGCTGACCTTTCGCCAGTTTCAAGAACAGGTCAGTCGCTATTCGGGGGCATTGGCATTTTTACAAACCCAA
CATCAAAGTGCAGCCTCGCTCATTGCTCGTAGTCCCAATACGGGGCTGCAGGAAAAATATCTTCCCCACTTGAGTAGTGG
CAAGGTGTCGGTTGGGATTGGTTTTTCTCATCTGCGCCGCCAGAATCCACCCCCAGTGCAGGCTATTGAAACGGATACGG
GTTATGAAATTACGGGTGAAGTTCCTTGGGTCACTGGATATGGTTGTTTTAAGCACTTTATTGTTGGAGCCCAACTGGCG
GATGGACAAGCGGTGTTTGGTTTAGTGCCCTTGGCAACAGTTTCTCAAGCTGGGGGCATAATCACTTGCAGCGATCCACT
ACCTTTGGCGGCCATGGGGGCTACCCAGACGGTGAAGGTTCGATTGAACCGTTGGCAACTTCCGCAGGATGCAGTTGTGG
TGATACGTCCACCGGACTGGATTCATACCAATGATCAGAAAAATAGCCTGCACCATAGCTTTTTTGCTTTGGGATGTGCT
CAGGCTGGACTGGATATTCTTTCTAATGAGAAGCTACCAGACTTTGTAGATCCGGCTCGACAATTATTGGATCAGGAGTT
ACAGTCGTGCCGATTGGCAATTTACCAGGAGCAGCAAACCCCTGAGTTAACGGTGCCCAAACGTCTACAGCTGAGAGCCT
GGGCGATTGAATTGGCGAATCGCTGTGCCCATGCGGCTGTGATTAGTGGGCGGGGTGGAGCCAATTTGATGGACCATCCC
GCCCAACGGGTTTATCGGGAAGCGTTAGCTTTTTCGGTATTTGGGCAAACGACGGATGTGATGGAAGTGTCATTGGCCCG
GTTGGTTCGCTCAAGCTCCTGA

Upstream 100 bases:

>100_bases
GCGTCCTAAGTCGTTGGATTGGGATTGGCTTCGCTCAGTTCTGGATCTTGGGGGTGTGAGTAGAGACTTTAGAGACTTTC
TGGCACAGATGGCGAATTGA

Downstream 100 bases:

>100_bases
TTTTATGCCTGTAGACCAGGCTTCACTACTCTCGGAAATAGTAGTCTCTGAGTGAGCCGTCAAAGCGACCACTCTGCATA
CAGCAATGCTTGAATTTGCG

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTFLEQTEAFLRGVIAPQAMQIDQHSESLFQALKALGNQGLLGLRVPQEWGGQDLDELTFRQFQEQVSRYSGALAFLQTQ
HQSAASLIARSPNTGLQEKYLPHLSSGKVSVGIGFSHLRRQNPPPVQAIETDTGYEITGEVPWVTGYGCFKHFIVGAQLA
DGQAVFGLVPLATVSQAGGIITCSDPLPLAAMGATQTVKVRLNRWQLPQDAVVVIRPPDWIHTNDQKNSLHHSFFALGCA
QAGLDILSNEKLPDFVDPARQLLDQELQSCRLAIYQEQQTPELTVPKRLQLRAWAIELANRCAHAAVISGRGGANLMDHP
AQRVYREALAFSVFGQTTDVMEVSLARLVRSSS

Sequences:

>Translated_353_residues
MTFLEQTEAFLRGVIAPQAMQIDQHSESLFQALKALGNQGLLGLRVPQEWGGQDLDELTFRQFQEQVSRYSGALAFLQTQ
HQSAASLIARSPNTGLQEKYLPHLSSGKVSVGIGFSHLRRQNPPPVQAIETDTGYEITGEVPWVTGYGCFKHFIVGAQLA
DGQAVFGLVPLATVSQAGGIITCSDPLPLAAMGATQTVKVRLNRWQLPQDAVVVIRPPDWIHTNDQKNSLHHSFFALGCA
QAGLDILSNEKLPDFVDPARQLLDQELQSCRLAIYQEQQTPELTVPKRLQLRAWAIELANRCAHAAVISGRGGANLMDHP
AQRVYREALAFSVFGQTTDVMEVSLARLVRSSS
>Mature_352_residues
TFLEQTEAFLRGVIAPQAMQIDQHSESLFQALKALGNQGLLGLRVPQEWGGQDLDELTFRQFQEQVSRYSGALAFLQTQH
QSAASLIARSPNTGLQEKYLPHLSSGKVSVGIGFSHLRRQNPPPVQAIETDTGYEITGEVPWVTGYGCFKHFIVGAQLAD
GQAVFGLVPLATVSQAGGIITCSDPLPLAAMGATQTVKVRLNRWQLPQDAVVVIRPPDWIHTNDQKNSLHHSFFALGCAQ
AGLDILSNEKLPDFVDPARQLLDQELQSCRLAIYQEQQTPELTVPKRLQLRAWAIELANRCAHAAVISGRGGANLMDHPA
QRVYREALAFSVFGQTTDVMEVSLARLVRSSS

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=379, Percent_Identity=23.7467018469657, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 38716; Mature: 38584

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFLEQTEAFLRGVIAPQAMQIDQHSESLFQALKALGNQGLLGLRVPQEWGGQDLDELTF
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCHHHHHH
RQFQEQVSRYSGALAFLQTQHQSAASLIARSPNTGLQEKYLPHLSSGKVSVGIGFSHLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEECHHHHHC
QNPPPVQAIETDTGYEITGEVPWVTGYGCFKHFIVGAQLADGQAVFGLVPLATVSQAGGI
CCCCCCEEEECCCCCEEECCCCCEECHHHHHHHHHCCEECCCCEEEHHHHHHHHHHCCCE
ITCSDPLPLAAMGATQTVKVRLNRWQLPQDAVVVIRPPDWIHTNDQKNSLHHSFFALGCA
EEECCCCCEEECCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHH
QAGLDILSNEKLPDFVDPARQLLDQELQSCRLAIYQEQQTPELTVPKRLQLRAWAIELAN
HHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
RCAHAAVISGRGGANLMDHPAQRVYREALAFSVFGQTTDVMEVSLARLVRSSS
HHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFLEQTEAFLRGVIAPQAMQIDQHSESLFQALKALGNQGLLGLRVPQEWGGQDLDELTF
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCHHHHHH
RQFQEQVSRYSGALAFLQTQHQSAASLIARSPNTGLQEKYLPHLSSGKVSVGIGFSHLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEECHHHHHC
QNPPPVQAIETDTGYEITGEVPWVTGYGCFKHFIVGAQLADGQAVFGLVPLATVSQAGGI
CCCCCCEEEECCCCCEEECCCCCEECHHHHHHHHHCCEECCCCEEEHHHHHHHHHHCCCE
ITCSDPLPLAAMGATQTVKVRLNRWQLPQDAVVVIRPPDWIHTNDQKNSLHHSFFALGCA
EEECCCCCEEECCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHH
QAGLDILSNEKLPDFVDPARQLLDQELQSCRLAIYQEQQTPELTVPKRLQLRAWAIELAN
HHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
RCAHAAVISGRGGANLMDHPAQRVYREALAFSVFGQTTDVMEVSLARLVRSSS
HHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]