| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158333584
Identifier: 158333584
GI number: 158333584
Start: 354781
End: 355623
Strand: Reverse
Name: 158333584
Synonym: AM1_0385
Alternate gene names: NA
Gene position: 355623-354781 (Counterclockwise)
Preceding gene: 158333585
Following gene: 158333583
Centisome position: 5.47
GC content: 30.49
Gene sequence:
>843_bases ATGGCTATAAGTGAAGAATTAAACCTTGTATTTATCCATATTCCTAAAAACGCAGGTAAAAGTGTAACTAGTGCTTTAAA TATTTTTGATTTATCAAACAAGAGAAATAATAAGCTAGTCCAACGTAATCTTATCGGCAACGTTGGGAGATTTTTCTCTC AACGTTCAAATCGCCATAGTCTGAACTTTTCTCCGAAAATGGGTATGTATGACTATCCACTTTATATGGGCCATTGCACC TTACAAGAGATGGTTTCATTACGATTGAGTTCAATTGAATTCTTTAAAAATGCAGATAAGTTTGCTGTAATTAGAAACCC TTTTTCTAGAACTTTATCACTTTTTCATCATTGGTGTAAGAAAAACTATAGGGATAAAAGCGAGGCATCTATTTTATTTG ACAAGTTTATTACTGAGATAGAAAATATAAGGAGCTATGGAGAAATTGGAAGTGATACTCTTTTGGGAAAATGTAGACAT AGCATGATATCGCATTTTAACTTGCAAGTAGAATTTCTAGATACTAATTTTTCAGGAATTTCATCTGACTATATCTTGCA GTATGAATACTTAAATGATGCTCTCAAGAGTTTTATTCAATATATTACACTTCCTGTTGATCAATTTGCTTGGGAAACTT ATCCTAATTCACTATCTAAAGATTCATTCTGGTATGAAATTCTAAATAGCAATGAAATTGTTCTTAAAATAAATAGAATC TTTTCTAGAGACTTTTATGAATTAGGCTATCAGACTGATAATTTTTCTTTTGAAAATTCAAAATCATGTTTTCCAAAAGG GTATGAAGAAATTTCGTCAGGCTTTTTTAAGAGAGTTTCTTGA
Upstream 100 bases:
>100_bases TATCTATTGGTTCTAGTGAAAAGTAGAAATAATATTTTCTAAATGTTAAGAATATTTTGAGTCAGTCAATATTATTAGAT CAACAAAAATATTATGTCTT
Downstream 100 bases:
>100_bases AATATATCTAAGCAAATCAAACTAATAAGTTAATTTATGTATGAGCATATCTGATTTTAGTATTGTTCAGACTACAATTG GGCGATTTCATCATTTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MAISEELNLVFIHIPKNAGKSVTSALNIFDLSNKRNNKLVQRNLIGNVGRFFSQRSNRHSLNFSPKMGMYDYPLYMGHCT LQEMVSLRLSSIEFFKNADKFAVIRNPFSRTLSLFHHWCKKNYRDKSEASILFDKFITEIENIRSYGEIGSDTLLGKCRH SMISHFNLQVEFLDTNFSGISSDYILQYEYLNDALKSFIQYITLPVDQFAWETYPNSLSKDSFWYEILNSNEIVLKINRI FSRDFYELGYQTDNFSFENSKSCFPKGYEEISSGFFKRVS
Sequences:
>Translated_280_residues MAISEELNLVFIHIPKNAGKSVTSALNIFDLSNKRNNKLVQRNLIGNVGRFFSQRSNRHSLNFSPKMGMYDYPLYMGHCT LQEMVSLRLSSIEFFKNADKFAVIRNPFSRTLSLFHHWCKKNYRDKSEASILFDKFITEIENIRSYGEIGSDTLLGKCRH SMISHFNLQVEFLDTNFSGISSDYILQYEYLNDALKSFIQYITLPVDQFAWETYPNSLSKDSFWYEILNSNEIVLKINRI FSRDFYELGYQTDNFSFENSKSCFPKGYEEISSGFFKRVS >Mature_279_residues AISEELNLVFIHIPKNAGKSVTSALNIFDLSNKRNNKLVQRNLIGNVGRFFSQRSNRHSLNFSPKMGMYDYPLYMGHCTL QEMVSLRLSSIEFFKNADKFAVIRNPFSRTLSLFHHWCKKNYRDKSEASILFDKFITEIENIRSYGEIGSDTLLGKCRHS MISHFNLQVEFLDTNFSGISSDYILQYEYLNDALKSFIQYITLPVDQFAWETYPNSLSKDSFWYEILNSNEIVLKINRIF SRDFYELGYQTDNFSFENSKSCFPKGYEEISSGFFKRVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32762; Mature: 32630
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISEELNLVFIHIPKNAGKSVTSALNIFDLSNKRNNKLVQRNLIGNVGRFFSQRSNRHS CCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC LNFSPKMGMYDYPLYMGHCTLQEMVSLRLSSIEFFKNADKFAVIRNPFSRTLSLFHHWCK CCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH KNYRDKSEASILFDKFITEIENIRSYGEIGSDTLLGKCRHSMISHFNLQVEFLDTNFSGI CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCC SSDYILQYEYLNDALKSFIQYITLPVDQFAWETYPNSLSKDSFWYEILNSNEIVLKINRI CCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHEEEECCCEEEEEEHHH FSRDFYELGYQTDNFSFENSKSCFPKGYEEISSGFFKRVS HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure AISEELNLVFIHIPKNAGKSVTSALNIFDLSNKRNNKLVQRNLIGNVGRFFSQRSNRHS CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC LNFSPKMGMYDYPLYMGHCTLQEMVSLRLSSIEFFKNADKFAVIRNPFSRTLSLFHHWCK CCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH KNYRDKSEASILFDKFITEIENIRSYGEIGSDTLLGKCRHSMISHFNLQVEFLDTNFSGI CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCC SSDYILQYEYLNDALKSFIQYITLPVDQFAWETYPNSLSKDSFWYEILNSNEIVLKINRI CCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHEEEECCCEEEEEEHHH FSRDFYELGYQTDNFSFENSKSCFPKGYEEISSGFFKRVS HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA