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The map label for this gene is dinF [H]

Identifier: 158333563

GI number: 158333563

Start: 330470

End: 331819

Strand: Reverse

Name: dinF [H]

Synonym: AM1_0362

Alternate gene names: 158333563

Gene position: 331819-330470 (Counterclockwise)

Preceding gene: 158333564

Following gene: 158333562

Centisome position: 5.1

GC content: 49.26

Gene sequence:

>1350_bases
ATGGGCTTATCAATCCCGGCTCACTATAGAAGTTTTCTCCCTCGCTTTTATCAGCTCGCGGTTGTGAGTGCCCTATCGAA
TATGATGGTGCCCCTGGCGGGTTTGTTTGATACGGCCTTCCTGGGACATCTCGACGATATTCGCCACCTAGCTGGGGTGA
TCTTGGGTAGCGTTCTCTTCGATTACCTCTACCGCATCCTCAAGTTCTTTAGAAATAGTACCAACGCTATTACAGCCCAA
GCGGAAGGTGAGAAGAACCATCAAGAGGTTCTGTTGGCTGGATTGCGCAGCAGCATGGTTGCGATCGCAGTAGCCATCCT
CATCCTTATCCTGCAATATCCCTTGCAACGTCTGGGGTTTGCGGTCTTATCCGGTTCTCCAGAAATTGAAGCCGCAGGGC
TCGATTACTTCAATGCCCGCATCTGGGGAGCCCCCGCCGTATTGCTTAACTTTGTGCTGATTGGCTGGTTCTTGGGGCGG
GAAATGAACCGGATTGTCCTAATTATTTCACTGGTTGGTAACGGTTCCAATGTCCTCCTGGACTATTTGATGATTAACCG
CTGGGGTTGGGACAGCATGGGGGCAGGACTCGCAACAGCCCTTAGCCAATATTTAGCCCTGGGAGTAGCTTTAGTCGCAG
TGGTCTCCAGCATCGAATGGGCTCGGGTGCCTGCTGCCTTAAAACAGGTCTGGGATGTCGCTGCCTTCAAATCCACCCTG
CTGCTCAAGGGGAATATCCTAATTCGCTTTGTGGCCTTAATTTCGGCCTATGCCATTTTCACCAACTTGAGCACCACCTT
GGGCACAACTATCCTGGCGGAAAATGGTTTGATGCTCCAAATCGCCTTTTTAAGCCAGTTCACGGTGAATGGTGTTGGGC
TCACGACTCAGACCCTCGTTGGCAACTTTAAGGGCAAAGGGGAGTCAGAATTGATGATGCCAATTCTCTATACCTCGATT
GTTCATGGACTGCTAATCTCCCTGCCTTTTGCAGTTCTTTCCGTTCTGTTTCCAGTGACGGTGTTTGGACTATTGACCAG
CCATACAGAAGTCAGCTATTCCATCCATACCTATGTGATCTGGTTGGTACCGCTACTGAGTTTAACAGCGGTAGCCTTCG
TATTAGAAGGATATTTTATTGGTCTCAAAGAGGGCGCTATTCTTCGAAATTCTGCGTTGACGGCGCTGGGAATTGGCTAT
GCACCGATTGCGATCGCGGGTTGGTATTACCAAAGTAATCATCTGCTGTGGACCTCCCTCACGGTTTACATGGCTACCCT
GACGCTTTCTCTTTCCTTACAGATTTTGAAAAATCAACAGAACTTTCAATCTTCTCTAAGCCAAACCTAA

Upstream 100 bases:

>100_bases
CTATCTTTTGGGTTGGCCAATGTAGGGATTCCCTTCTCTGTTGAATATTCTTTAGAGATGCAGATAGAGGTCCATATTGA
GGATGCTAGAAAAGGTAAGT

Downstream 100 bases:

>100_bases
AGTGTTCTCGGCTTAAAAAATATTGAAAAATTAGCAAAAATAATAGAGTACAAAAATCCCTCAGCGACTTCGCCGAGGGA
TTAGAATTATGGAAAATATA

Product: DNA-damage-inducible protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MGLSIPAHYRSFLPRFYQLAVVSALSNMMVPLAGLFDTAFLGHLDDIRHLAGVILGSVLFDYLYRILKFFRNSTNAITAQ
AEGEKNHQEVLLAGLRSSMVAIAVAILILILQYPLQRLGFAVLSGSPEIEAAGLDYFNARIWGAPAVLLNFVLIGWFLGR
EMNRIVLIISLVGNGSNVLLDYLMINRWGWDSMGAGLATALSQYLALGVALVAVVSSIEWARVPAALKQVWDVAAFKSTL
LLKGNILIRFVALISAYAIFTNLSTTLGTTILAENGLMLQIAFLSQFTVNGVGLTTQTLVGNFKGKGESELMMPILYTSI
VHGLLISLPFAVLSVLFPVTVFGLLTSHTEVSYSIHTYVIWLVPLLSLTAVAFVLEGYFIGLKEGAILRNSALTALGIGY
APIAIAGWYYQSNHLLWTSLTVYMATLTLSLSLQILKNQQNFQSSLSQT

Sequences:

>Translated_449_residues
MGLSIPAHYRSFLPRFYQLAVVSALSNMMVPLAGLFDTAFLGHLDDIRHLAGVILGSVLFDYLYRILKFFRNSTNAITAQ
AEGEKNHQEVLLAGLRSSMVAIAVAILILILQYPLQRLGFAVLSGSPEIEAAGLDYFNARIWGAPAVLLNFVLIGWFLGR
EMNRIVLIISLVGNGSNVLLDYLMINRWGWDSMGAGLATALSQYLALGVALVAVVSSIEWARVPAALKQVWDVAAFKSTL
LLKGNILIRFVALISAYAIFTNLSTTLGTTILAENGLMLQIAFLSQFTVNGVGLTTQTLVGNFKGKGESELMMPILYTSI
VHGLLISLPFAVLSVLFPVTVFGLLTSHTEVSYSIHTYVIWLVPLLSLTAVAFVLEGYFIGLKEGAILRNSALTALGIGY
APIAIAGWYYQSNHLLWTSLTVYMATLTLSLSLQILKNQQNFQSSLSQT
>Mature_448_residues
GLSIPAHYRSFLPRFYQLAVVSALSNMMVPLAGLFDTAFLGHLDDIRHLAGVILGSVLFDYLYRILKFFRNSTNAITAQA
EGEKNHQEVLLAGLRSSMVAIAVAILILILQYPLQRLGFAVLSGSPEIEAAGLDYFNARIWGAPAVLLNFVLIGWFLGRE
MNRIVLIISLVGNGSNVLLDYLMINRWGWDSMGAGLATALSQYLALGVALVAVVSSIEWARVPAALKQVWDVAAFKSTLL
LKGNILIRFVALISAYAIFTNLSTTLGTTILAENGLMLQIAFLSQFTVNGVGLTTQTLVGNFKGKGESELMMPILYTSIV
HGLLISLPFAVLSVLFPVTVFGLLTSHTEVSYSIHTYVIWLVPLLSLTAVAFVLEGYFIGLKEGAILRNSALTALGIGYA
PIAIAGWYYQSNHLLWTSLTVYMATLTLSLSLQILKNQQNFQSSLSQT

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

Organism=Escherichia coli, GI1790477, Length=428, Percent_Identity=29.6728971962617, Blast_Score=138, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 48918; Mature: 48787

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSIPAHYRSFLPRFYQLAVVSALSNMMVPLAGLFDTAFLGHLDDIRHLAGVILGSVLF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLYRILKFFRNSTNAITAQAEGEKNHQEVLLAGLRSSMVAIAVAILILILQYPLQRLGF
HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AVLSGSPEIEAAGLDYFNARIWGAPAVLLNFVLIGWFLGREMNRIVLIISLVGNGSNVLL
HHCCCCCCCEECCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHH
DYLMINRWGWDSMGAGLATALSQYLALGVALVAVVSSIEWARVPAALKQVWDVAAFKSTL
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LLKGNILIRFVALISAYAIFTNLSTTLGTTILAENGLMLQIAFLSQFTVNGVGLTTQTLV
HEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHHCCCCCCCHHHHH
GNFKGKGESELMMPILYTSIVHGLLISLPFAVLSVLFPVTVFGLLTSHTEVSYSIHTYVI
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH
WLVPLLSLTAVAFVLEGYFIGLKEGAILRNSALTALGIGYAPIAIAGWYYQSNHLLWTSL
HHHHHHHHHHHHHHHHHHHEEECCCCEECCCCHHHHCCCCHHHHHEEEEEECCCEEHHHH
TVYMATLTLSLSLQILKNQQNFQSSLSQT
HHHHHHHHHHHHHHHHHCHHHHHHHHCCC
>Mature Secondary Structure 
GLSIPAHYRSFLPRFYQLAVVSALSNMMVPLAGLFDTAFLGHLDDIRHLAGVILGSVLF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLYRILKFFRNSTNAITAQAEGEKNHQEVLLAGLRSSMVAIAVAILILILQYPLQRLGF
HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AVLSGSPEIEAAGLDYFNARIWGAPAVLLNFVLIGWFLGREMNRIVLIISLVGNGSNVLL
HHCCCCCCCEECCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHH
DYLMINRWGWDSMGAGLATALSQYLALGVALVAVVSSIEWARVPAALKQVWDVAAFKSTL
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LLKGNILIRFVALISAYAIFTNLSTTLGTTILAENGLMLQIAFLSQFTVNGVGLTTQTLV
HEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHHCCCCCCCHHHHH
GNFKGKGESELMMPILYTSIVHGLLISLPFAVLSVLFPVTVFGLLTSHTEVSYSIHTYVI
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH
WLVPLLSLTAVAFVLEGYFIGLKEGAILRNSALTALGIGYAPIAIAGWYYQSNHLLWTSL
HHHHHHHHHHHHHHHHHHHEEECCCCEECCCCHHHHCCCCHHHHHEEEEEECCCEEHHHH
TVYMATLTLSLSLQILKNQQNFQSSLSQT
HHHHHHHHHHHHHHHHHCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]