| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333518
Identifier: 158333518
GI number: 158333518
Start: 289900
End: 290640
Strand: Direct
Name: 158333518
Synonym: AM1_0290
Alternate gene names: NA
Gene position: 289900-290640 (Clockwise)
Preceding gene: 158333517
Following gene: 158333519
Centisome position: 4.46
GC content: 43.45
Gene sequence:
>741_bases ATGCGTCGAATTATTGGACTTGCAATTCTAGAAGATGAAGTAATTATTACTTCTGGATTACAGCCTCCTCTGCATCGAGA GCGATCGTTCTATTCTCACCAAGGGACTAGCTACTGGTCTTACTTTCGTGCAGTTGTGAAGCGACCTCGCCTGCCAGGTT TATTCCTGCTCTCTCCTAGAATAGTGGCCGTCAGCGACATCCGTTATCACGATTCTCCCTTCAGCCACCTATCTCTAGAA ACGTCCTCATCACTCACTACTATTGATCCTGGCATCATCATTACAGCTGGCTGTGGTGTGGATATTGGCCAAGAACAGCG TACTTTATTCCTGGTTATATGTAGGAATCGGATTAAATTTTTTATCCACTTCTGTGGAGGTCTATTTCACCCGATCACCC TAGAACTAAAACAACGGGGGAAGTCTCTGGCTGGTCGATTGAGGAATCTCTTACAGGAACTCCATTTCTCAGAGTTACCA ACTTCCCTCTCTCTCTCTTCCAACTTTAATTGGTCTCAGCAAGAGCTATCGAGACTTGAGCGTAGTTGGAAGAAACCTAT CTCACAGGAGGTTCATATTGTGAATGCTCAAATGGACAACCACCTTCAAGAAATATCGAAGGATATTTCTGAAGACTTTA ATTTCGTGATCCATCAAAATTACTACACTGTTTATGAGCAGGGATTGCAAGTACTTTGCACTGATACATCCTTGACTCAG CTCATAAGAATCGCGAGTTGA
Upstream 100 bases:
>100_bases GCTCTTCTTGCTAAATTCAATACCTGGAATTTCTGCAATTAGTGCATATAGAAGAAAGCATAAATCTTGTAAGCCTTCTA GTCATTCTCTATCAACTGAT
Downstream 100 bases:
>100_bases AGATAGATTTCCCTCTTTTTTCCTATAGTTCTTTACTGCCAGAGTTACTCCTTTTCCTGGGTAATTGCCGTATTGAATTA AGTGCCATTACTTTTACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MRRIIGLAILEDEVIITSGLQPPLHRERSFYSHQGTSYWSYFRAVVKRPRLPGLFLLSPRIVAVSDIRYHDSPFSHLSLE TSSSLTTIDPGIIITAGCGVDIGQEQRTLFLVICRNRIKFFIHFCGGLFHPITLELKQRGKSLAGRLRNLLQELHFSELP TSLSLSSNFNWSQQELSRLERSWKKPISQEVHIVNAQMDNHLQEISKDISEDFNFVIHQNYYTVYEQGLQVLCTDTSLTQ LIRIAS
Sequences:
>Translated_246_residues MRRIIGLAILEDEVIITSGLQPPLHRERSFYSHQGTSYWSYFRAVVKRPRLPGLFLLSPRIVAVSDIRYHDSPFSHLSLE TSSSLTTIDPGIIITAGCGVDIGQEQRTLFLVICRNRIKFFIHFCGGLFHPITLELKQRGKSLAGRLRNLLQELHFSELP TSLSLSSNFNWSQQELSRLERSWKKPISQEVHIVNAQMDNHLQEISKDISEDFNFVIHQNYYTVYEQGLQVLCTDTSLTQ LIRIAS >Mature_246_residues MRRIIGLAILEDEVIITSGLQPPLHRERSFYSHQGTSYWSYFRAVVKRPRLPGLFLLSPRIVAVSDIRYHDSPFSHLSLE TSSSLTTIDPGIIITAGCGVDIGQEQRTLFLVICRNRIKFFIHFCGGLFHPITLELKQRGKSLAGRLRNLLQELHFSELP TSLSLSSNFNWSQQELSRLERSWKKPISQEVHIVNAQMDNHLQEISKDISEDFNFVIHQNYYTVYEQGLQVLCTDTSLTQ LIRIAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28242; Mature: 28242
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIIGLAILEDEVIITSGLQPPLHRERSFYSHQGTSYWSYFRAVVKRPRLPGLFLLSPR CCCEEEEEEECCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCC IVAVSDIRYHDSPFSHLSLETSSSLTTIDPGIIITAGCGVDIGQEQRTLFLVICRNRIKF EEEEEECEECCCCCCEEEEECCCCEEEECCCEEEEECCCCCCCCCCCCEEEEEHHHHHHH FIHFCGGLFHPITLELKQRGKSLAGRLRNLLQELHFSELPTSLSLSSNFNWSQQELSRLE HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH RSWKKPISQEVHIVNAQMDNHLQEISKDISEDFNFVIHQNYYTVYEQGLQVLCTDTSLTQ HHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCEEEECCHHHHH LIRIAS HHHHCC >Mature Secondary Structure MRRIIGLAILEDEVIITSGLQPPLHRERSFYSHQGTSYWSYFRAVVKRPRLPGLFLLSPR CCCEEEEEEECCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCC IVAVSDIRYHDSPFSHLSLETSSSLTTIDPGIIITAGCGVDIGQEQRTLFLVICRNRIKF EEEEEECEECCCCCCEEEEECCCCEEEECCCEEEEECCCCCCCCCCCCEEEEEHHHHHHH FIHFCGGLFHPITLELKQRGKSLAGRLRNLLQELHFSELPTSLSLSSNFNWSQQELSRLE HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH RSWKKPISQEVHIVNAQMDNHLQEISKDISEDFNFVIHQNYYTVYEQGLQVLCTDTSLTQ HHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCEEEECCHHHHH LIRIAS HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA