| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333449
Identifier: 158333449
GI number: 158333449
Start: 217595
End: 218452
Strand: Reverse
Name: 158333449
Synonym: AM1_0221
Alternate gene names: NA
Gene position: 218452-217595 (Counterclockwise)
Preceding gene: 158333450
Following gene: 158333446
Centisome position: 3.36
GC content: 45.69
Gene sequence:
>858_bases ATGTCTGATTCTTGCTTCTTAGAACCCCACCAAGATTTATATAGTATTTGCCTTCAACAACTACTTCCAATTGCGAGTGA AAGAGTACAATCCGTTGACCTGGACTGGTGGAATATTGAAAGTTTTTTAGGCTTGGCTTTCCATATCTTGTTAAGTGAGA CGGATTCTAAACTTCGGTCCCAAGTCGCTCAAATAATACCGCTGTTTGGTGCTAAGGCAGTCCCCAACTTAGTCTTCATA GAGCAAGAACACGTCCTGGATGCTGATTTGAAATCTTTGGTCAATTTGACCTTCAGTAAAATTGAGCCTCAGCAACAGGT TATGGGGCTGATTGATATGCTTAAAGCTTGTGAAGATCAGAGCCTTGACTACCTCATCGCCCAAAAATTATGGGAGATAG GAGCTGTAGCAACTGAGGCAGTGGCAACCTTACTAGCAGATCCAGATGAACAAGAGCTTGCCCTAAGACTTTTAGCGCAG TTCCAGCAATTCCATCATCAGCAAGTGGCTAATCTGGAAGCTCTGTTTGAGCACAGCCCAGATTTTGATCCCCCCGGTTC ATACGGTGCAATCAAACAAAAAGCAGAAACGCTACTTAAAGCAGCAATGCAAGCGGAGAGTGCGGCTCCTAGGCAGGCTG TGGCACTCTATACGGAAGCACTTCAATTGTGCTCTGACCATGCACAGGCTTATGGGAGTCGAGGTTTGCTACGGGCCATC TTAGGAGACCCACAAGGAGCAATGGCTGATTTCCAGGCCGCTGCGGAGTTATTTCGAGAACAAGGTAAAACGGCAAATGC AGAAATTGCTCTTGGGTATTGTAAAGCAATGGCTCGTCAGTTGCCCCACTTAGATTAA
Upstream 100 bases:
>100_bases TTTATAGAATCCTGGCATGAACGCATGGCACTTCAAATGCTAAATACTCTACAGTAAAAATAAGTTTTTATCTGTTTGAA GTTTAGCAAGAGGTCCTTTG
Downstream 100 bases:
>100_bases GTCTATCGTTGTACGCAAATCGATTTTAGACTGAAGGGCAGCGGTATAGTGCGATATTGGCTATGGGTAATCCAATTCTG ATCTAAATGGTCGTTTTCTT
Product: TPR domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSDSCFLEPHQDLYSICLQQLLPIASERVQSVDLDWWNIESFLGLAFHILLSETDSKLRSQVAQIIPLFGAKAVPNLVFI EQEHVLDADLKSLVNLTFSKIEPQQQVMGLIDMLKACEDQSLDYLIAQKLWEIGAVATEAVATLLADPDEQELALRLLAQ FQQFHHQQVANLEALFEHSPDFDPPGSYGAIKQKAETLLKAAMQAESAAPRQAVALYTEALQLCSDHAQAYGSRGLLRAI LGDPQGAMADFQAAAELFREQGKTANAEIALGYCKAMARQLPHLD
Sequences:
>Translated_285_residues MSDSCFLEPHQDLYSICLQQLLPIASERVQSVDLDWWNIESFLGLAFHILLSETDSKLRSQVAQIIPLFGAKAVPNLVFI EQEHVLDADLKSLVNLTFSKIEPQQQVMGLIDMLKACEDQSLDYLIAQKLWEIGAVATEAVATLLADPDEQELALRLLAQ FQQFHHQQVANLEALFEHSPDFDPPGSYGAIKQKAETLLKAAMQAESAAPRQAVALYTEALQLCSDHAQAYGSRGLLRAI LGDPQGAMADFQAAAELFREQGKTANAEIALGYCKAMARQLPHLD >Mature_284_residues SDSCFLEPHQDLYSICLQQLLPIASERVQSVDLDWWNIESFLGLAFHILLSETDSKLRSQVAQIIPLFGAKAVPNLVFIE QEHVLDADLKSLVNLTFSKIEPQQQVMGLIDMLKACEDQSLDYLIAQKLWEIGAVATEAVATLLADPDEQELALRLLAQF QQFHHQQVANLEALFEHSPDFDPPGSYGAIKQKAETLLKAAMQAESAAPRQAVALYTEALQLCSDHAQAYGSRGLLRAIL GDPQGAMADFQAAAELFREQGKTANAEIALGYCKAMARQLPHLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31473; Mature: 31342
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSCFLEPHQDLYSICLQQLLPIASERVQSVDLDWWNIESFLGLAFHILLSETDSKLRS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QVAQIIPLFGAKAVPNLVFIEQEHVLDADLKSLVNLTFSKIEPQQQVMGLIDMLKACEDQ HHHHHHHHHCHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC SLDYLIAQKLWEIGAVATEAVATLLADPDEQELALRLLAQFQQFHHQQVANLEALFEHSP CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DFDPPGSYGAIKQKAETLLKAAMQAESAAPRQAVALYTEALQLCSDHAQAYGSRGLLRAI CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LGDPQGAMADFQAAAELFREQGKTANAEIALGYCKAMARQLPHLD HCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDSCFLEPHQDLYSICLQQLLPIASERVQSVDLDWWNIESFLGLAFHILLSETDSKLRS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QVAQIIPLFGAKAVPNLVFIEQEHVLDADLKSLVNLTFSKIEPQQQVMGLIDMLKACEDQ HHHHHHHHHCHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC SLDYLIAQKLWEIGAVATEAVATLLADPDEQELALRLLAQFQQFHHQQVANLEALFEHSP CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DFDPPGSYGAIKQKAETLLKAAMQAESAAPRQAVALYTEALQLCSDHAQAYGSRGLLRAI CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LGDPQGAMADFQAAAELFREQGKTANAEIALGYCKAMARQLPHLD HCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA