| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333434
Identifier: 158333434
GI number: 158333434
Start: 205328
End: 206068
Strand: Reverse
Name: 158333434
Synonym: AM1_0206
Alternate gene names: NA
Gene position: 206068-205328 (Counterclockwise)
Preceding gene: 158333437
Following gene: 158333433
Centisome position: 3.17
GC content: 46.15
Gene sequence:
>741_bases ATGTCAAAGCACATCTTAATGATCGTTTCCAACTCTGCTACCAGCAACATCGGCAAACCCGTGGGGATCTGTGCTGTTGA ACTGATCCATCCTTACGCTGTGCTCAAAGCCTCTGGCTGCCAGGTGACCATCGCAAGTTCCCAGGGTGGCCCGATTGAAC TTGATGCACAGAGTGAACCTCGTGATCCGTCTGGGTTCTTGTCGCTGGATATCCTCTCTGCTCGATATATTACCCAAGCG GCGTTTACCGATCAGTTATCGAATACCCCTGCGATCTCAAATCTCAATACACAGGACTATGATGCAATCTTTGTTTGTGG TGGTCAGGGAACCCTCTATACTTTCCCAAAAGACAAGGCTTTGACCGATTTATTTGTCAGCTTTTACCAAGACGAGAAAC CGAGTGCAACCCTCTGTCGAGGCGCTTGCTTACTCCTGAATGCCACCTTGGATAATGGCGAACCGTTGATTCAAGGCAAA ATGATCACTGGATTCTCTAAGAAAGAAGAGCAGTGGATGAGTAAAAACTTTGGCCCGATGATGGTTCCTTTTGTTGTAGA AGAGGAGGCCAAAAAGCGCGGTGCAAAATTTGTGGCGAGTTCTGCCTTCACACCATTTGTAATTCAAGACAGCAACTTGA TTACTGGCCAGCAAAGCAATTCTGCTTTCCTAACGGCGAGCTTAGTCTTAAAGGCGTTGGATTTAGACTTTAATGATTCA TACTTTGACAATTCACACTAA
Upstream 100 bases:
>100_bases GATTAGTCAAAACATAAGCTAACTCAAAAACATGGCTGAAATAGCAATTTGACCTCTGCTCAGAAATACCTCATCAACCC AGTACCCATCAATCTTCAAA
Downstream 100 bases:
>100_bases GGACTTTTGTCTTCCATTGTTCAGGCTCCTCCCTTTCATGGGGCTGGAGGGGAGTGATGACGATTGAACAGCACTGTTAA CTTGATCATGTGGCCAAGGT
Product: DJ-1/PfpI family protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; DJ-1/PfpI Family; NonF-Related Protein; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase-Like Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; C56 Family Peptidase; Intracellular Protease/Amidase-Like; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Amidotransferase; Amidotransferase/Amidase; Protease I; Transcriptional Regulator Fis Family; Protease; Intracellular Protease Amidase; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; ThiJ/PfpI Protein; Regulatory Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator; ThiJ Protein; NonF Protein
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSKHILMIVSNSATSNIGKPVGICAVELIHPYAVLKASGCQVTIASSQGGPIELDAQSEPRDPSGFLSLDILSARYITQA AFTDQLSNTPAISNLNTQDYDAIFVCGGQGTLYTFPKDKALTDLFVSFYQDEKPSATLCRGACLLLNATLDNGEPLIQGK MITGFSKKEEQWMSKNFGPMMVPFVVEEEAKKRGAKFVASSAFTPFVIQDSNLITGQQSNSAFLTASLVLKALDLDFNDS YFDNSH
Sequences:
>Translated_246_residues MSKHILMIVSNSATSNIGKPVGICAVELIHPYAVLKASGCQVTIASSQGGPIELDAQSEPRDPSGFLSLDILSARYITQA AFTDQLSNTPAISNLNTQDYDAIFVCGGQGTLYTFPKDKALTDLFVSFYQDEKPSATLCRGACLLLNATLDNGEPLIQGK MITGFSKKEEQWMSKNFGPMMVPFVVEEEAKKRGAKFVASSAFTPFVIQDSNLITGQQSNSAFLTASLVLKALDLDFNDS YFDNSH >Mature_245_residues SKHILMIVSNSATSNIGKPVGICAVELIHPYAVLKASGCQVTIASSQGGPIELDAQSEPRDPSGFLSLDILSARYITQAA FTDQLSNTPAISNLNTQDYDAIFVCGGQGTLYTFPKDKALTDLFVSFYQDEKPSATLCRGACLLLNATLDNGEPLIQGKM ITGFSKKEEQWMSKNFGPMMVPFVVEEEAKKRGAKFVASSAFTPFVIQDSNLITGQQSNSAFLTASLVLKALDLDFNDSY FDNSH
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320742, Length=242, Percent_Identity=29.3388429752066, Blast_Score=87, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6324967, Length=220, Percent_Identity=28.1818181818182, Blast_Score=81, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6324975, Length=220, Percent_Identity=28.1818181818182, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323984, Length=220, Percent_Identity=27.7272727272727, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26614; Mature: 26483
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHILMIVSNSATSNIGKPVGICAVELIHPYAVLKASGCQVTIASSQGGPIELDAQSEP CCCEEEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEECCCEEEEECCCCCCEEECCCCCC RDPSGFLSLDILSARYITQAAFTDQLSNTPAISNLNTQDYDAIFVCGGQGTLYTFPKDKA CCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCHH LTDLFVSFYQDEKPSATLCRGACLLLNATLDNGEPLIQGKMITGFSKKEEQWMSKNFGPM HHHHHHHHHCCCCCCHHHHCCEEEEEEEECCCCCCEEEEEEEECCCHHHHHHHHCCCCCE MVPFVVEEEAKKRGAKFVASSAFTPFVIQDSNLITGQQSNSAFLTASLVLKALDLDFNDS EEEEEECHHHHHCCHHEEECCCCCEEEEECCCEEECCCCCCEEEHHHHHHHHHCCCCCCC YFDNSH CCCCCC >Mature Secondary Structure SKHILMIVSNSATSNIGKPVGICAVELIHPYAVLKASGCQVTIASSQGGPIELDAQSEP CCEEEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEECCCEEEEECCCCCCEEECCCCCC RDPSGFLSLDILSARYITQAAFTDQLSNTPAISNLNTQDYDAIFVCGGQGTLYTFPKDKA CCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCHH LTDLFVSFYQDEKPSATLCRGACLLLNATLDNGEPLIQGKMITGFSKKEEQWMSKNFGPM HHHHHHHHHCCCCCCHHHHCCEEEEEEEECCCCCCEEEEEEEECCCHHHHHHHHCCCCCE MVPFVVEEEAKKRGAKFVASSAFTPFVIQDSNLITGQQSNSAFLTASLVLKALDLDFNDS EEEEEECHHHHHCCHHEEECCCCCEEEEECCCEEECCCCCCEEEHHHHHHHHHCCCCCCC YFDNSH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA